The gene/protein map for NC_008044 is currently unavailable.
Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

Click here to switch to the map view.

The map label for this gene is 99080903

Identifier: 99080903

GI number: 99080903

Start: 1141108

End: 1141710

Strand: Direct

Name: 99080903

Synonym: TM1040_1062

Alternate gene names: NA

Gene position: 1141108-1141710 (Clockwise)

Preceding gene: 99080902

Following gene: 99080904

Centisome position: 35.65

GC content: 68.33

Gene sequence:

>603_bases
ATGATTTTGCACGAACTGACCCCGCTGCCGGACAGCGCCCTACCGCTCGCGGCCTTCAAGGCGCATCTGCGTCTGGGCAC
GGGATTTGGCGAGGAAACGCTGCAGGACGCGGTGCTTCTGGCCTTCTTGCGCGCCAGCCTTGCGGCCATTGAGGCGCGGA
TCAACAAGGCGCTGATGCAGCGCGACTATGTGTGGCGCCTCAATGCCTGGCCCCGCGTGGTGGAGCTGCCGGTGGCGCCG
GTTTCGAGCGTCACGCAGGTGGCACTGGTGGACCAAACCGGCGCGGAGACCGAAGTGCCCGCGGCGGCCTATGCGCTGGC
ACCCGACGCCCATGCGCCGCGCCTCACTCCGGTGGCGGGCCTCTGGCCGATGCTGCCCACGCAGGGCGGCGCGGTGATCC
GTTTCACCGCCGGGATGGCGGCGACATGGGATGCGATCCCGGCGGATCTGGCGCAGGCGGTGATGCTGCTGGCGGCGCAT
TACTACGAGTATCGCGATGACACCTCCTTGCATGCAGGCTGCATGCCCTTTGGGGTGGCGAGCCTCTTGGACCGCCACCG
GATGCCGCGCCTGAGCCTGGCCCGGAGCGAGGTGCAATCATGA

Upstream 100 bases:

>100_bases
GCTCCCCTCCGTCCGAGCGGCAGACCCGGCGCGCACCCGCCCCCTAAGGGAGGCACAGCAGACCCTGTGCGCGGAGCGAG
ATTTCCAGCGGAGATTGCCG

Downstream 100 bases:

>100_bases
GCGCGCCACGTCTGAACCGCCTGTTGCACCTCGAAGATCCACAAGCGACCGGTGACGGCGCCGGAGGGTTTGAGGTGACT
TGGGTTGTGCTGGGCCAGCA

Product: phiE125 gp8 hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MILHELTPLPDSALPLAAFKAHLRLGTGFGEETLQDAVLLAFLRASLAAIEARINKALMQRDYVWRLNAWPRVVELPVAP
VSSVTQVALVDQTGAETEVPAAAYALAPDAHAPRLTPVAGLWPMLPTQGGAVIRFTAGMAATWDAIPADLAQAVMLLAAH
YYEYRDDTSLHAGCMPFGVASLLDRHRMPRLSLARSEVQS

Sequences:

>Translated_200_residues
MILHELTPLPDSALPLAAFKAHLRLGTGFGEETLQDAVLLAFLRASLAAIEARINKALMQRDYVWRLNAWPRVVELPVAP
VSSVTQVALVDQTGAETEVPAAAYALAPDAHAPRLTPVAGLWPMLPTQGGAVIRFTAGMAATWDAIPADLAQAVMLLAAH
YYEYRDDTSLHAGCMPFGVASLLDRHRMPRLSLARSEVQS
>Mature_200_residues
MILHELTPLPDSALPLAAFKAHLRLGTGFGEETLQDAVLLAFLRASLAAIEARINKALMQRDYVWRLNAWPRVVELPVAP
VSSVTQVALVDQTGAETEVPAAAYALAPDAHAPRLTPVAGLWPMLPTQGGAVIRFTAGMAATWDAIPADLAQAVMLLAAH
YYEYRDDTSLHAGCMPFGVASLLDRHRMPRLSLARSEVQS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21587; Mature: 21587

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILHELTPLPDSALPLAAFKAHLRLGTGFGEETLQDAVLLAFLRASLAAIEARINKALMQ
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDYVWRLNAWPRVVELPVAPVSSVTQVALVDQTGAETEVPAAAYALAPDAHAPRLTPVAG
HCCEEEECCCCCEEECCCCCHHHHHEEEEECCCCCCCCCCHHHHEECCCCCCCCCCCHHH
LWPMLPTQGGAVIRFTAGMAATWDAIPADLAQAVMLLAAHYYEYRDDTSLHAGCMPFGVA
HCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
SLLDRHRMPRLSLARSEVQS
HHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure
MILHELTPLPDSALPLAAFKAHLRLGTGFGEETLQDAVLLAFLRASLAAIEARINKALMQ
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDYVWRLNAWPRVVELPVAPVSSVTQVALVDQTGAETEVPAAAYALAPDAHAPRLTPVAG
HCCEEEECCCCCEEECCCCCHHHHHEEEEECCCCCCCCCCHHHHEECCCCCCCCCCCHHH
LWPMLPTQGGAVIRFTAGMAATWDAIPADLAQAVMLLAAHYYEYRDDTSLHAGCMPFGVA
HCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
SLLDRHRMPRLSLARSEVQS
HHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA