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The map label for this gene is 99080902

Identifier: 99080902

GI number: 99080902

Start: 1139733

End: 1140929

Strand: Direct

Name: 99080902

Synonym: TM1040_1061

Alternate gene names: NA

Gene position: 1139733-1140929 (Clockwise)

Preceding gene: 99080901

Following gene: 99080903

Centisome position: 35.61

GC content: 62.24

Gene sequence:

>1197_bases
ATGACAGACCATCCCTTCACGGGCCACGCGCCCGAGGATGCGGCGACCCCGCCGCAGAATGTGGCCACGGAAGTGAAACA
GGCTGTTTCGCAATTCGTGCAGCATTTCAAGGGGTTCCAAGACGACGTGACCCAAAAACTCAAACAGACGGAAGAGCGTA
TGACCATGTTGGATCGTAAAACCCAAACCGCGGCGCGGCCGCATCTCGCAGCGGCCGAGGTCGATGGCGCACCGCATCAA
AAGGCGATGCAAGCCTATCTGCGCCAGGGCGACGAGGAGGGCTTTCGCGGCCTCGACCTGGAGGGCAAGGCCATGTCCAC
GGCGGTGAATTCCGATGGCGGTTTCCTGGTCGATCCGCAGACGGCGGATGTGGTGAGATCGGTGCTGCACTCCACTGCGT
CGATCCGTGCGGTGGCCTCGGTGGTCAATGTGGAGGCGACCTCCTTTGACGTGCTGATCGACCATTCCGACGTGGGCGCG
GGCTGGGCCACCGAGACCGGCTCGGTTACAGAGACCGGCACGCCGTCCATTGACCGTATCGTGATCCCGCTGCACGAGCT
CTCGGCCTTGCCCAAGGCTTCGCAACGGCTGCTGGATGACAGTGCCTTTGACATCGAGGGCTGGCTTGCGGGCCGGATCG
CCGACAAATTCGCCCGTGCCGAAGCGCAGAGTTTTATCTCGGGGGATGGCGTGGACAAACCCACCGGCATCCTGACCCAC
CCCACGGTGGACAATGGCAGCTGGAGCTGGGGGAACATCGGCTATGTGGCCACCGGCAGCGATGGCGGCATAGGCTCGGC
AGATGCGATCGTGGATCTGGTCTATGCGCTGGATGCGCGCTACCGCGCTGGGGCGAGCTTTGTGATGAACTCCAAAACGG
CGGGTCTTATCCGCAAACTCAAGGACGCCGATGGTCGTTTCCTGTGGTCCGACGGTCTTCAGGCGGGCGAACCTGCGCGG
CTGATGGGCTATCCGGTGCTGGTGGCCGAGGATATGCCGGATGTGGCCTCGGATAGTCTCTCGATTGCCTTTGGGGATTT
TGCCGCGGGCTACACGATCGCCGAGCGTCCCGATCTGCGCGTTCTGCGCGATCCCTTCTCTGCAAAACCGCATGTGCTGT
TTTATGCCTCCAAGCGCGTGGGCGGCGACGTGAGCGATTTTGCCGCGATCAAGCTGATGAAATTCGGGCTGAGCTGA

Upstream 100 bases:

>100_bases
CAGAGGCCGCGAAATCCGACGCCCCCGAGGCGGGGCTGCGCGCGCTTGCCGAAGCGCTGCGGGCCGCCACCAATCCCTAA
CCCCCGAAAGAGGATCAGAG

Downstream 100 bases:

>100_bases
GGCTTCCAGCCCGAATGACGGGGCCGGCAGCCCGGCTCCGTCGGTGGGTGCGCGCCCATATGGGTTTGTCGTCCAGCTGC
TCCCCTCCGTCCGAGCGGCA

Product: phage major capsid protein, HK97

Products: NA

Alternate protein names: HK97 Family Phage Capsid Protein; Phage Capsid Protein HK; Capsid Protein; HK97 Family Capsid Protein; Capsid Protein Of Prophage; Phage Capsid Protein; HK97 Family Phage Prohead Protease/Phage Capsid Protein; Phage Capsid Family; Phage Prohead Protease; Prophage; Phage Capsid Protein Gp; Bacteriophage Protein; Phage Capsid Protein-Like Protein; Phage Prohead Protease And Phage Capsid Protein; Phage Phi-C31 Capsid; Capsid-Like Protein; Capsid C; Phage Capsid Family Protein

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MTDHPFTGHAPEDAATPPQNVATEVKQAVSQFVQHFKGFQDDVTQKLKQTEERMTMLDRKTQTAARPHLAAAEVDGAPHQ
KAMQAYLRQGDEEGFRGLDLEGKAMSTAVNSDGGFLVDPQTADVVRSVLHSTASIRAVASVVNVEATSFDVLIDHSDVGA
GWATETGSVTETGTPSIDRIVIPLHELSALPKASQRLLDDSAFDIEGWLAGRIADKFARAEAQSFISGDGVDKPTGILTH
PTVDNGSWSWGNIGYVATGSDGGIGSADAIVDLVYALDARYRAGASFVMNSKTAGLIRKLKDADGRFLWSDGLQAGEPAR
LMGYPVLVAEDMPDVASDSLSIAFGDFAAGYTIAERPDLRVLRDPFSAKPHVLFYASKRVGGDVSDFAAIKLMKFGLS

Sequences:

>Translated_398_residues
MTDHPFTGHAPEDAATPPQNVATEVKQAVSQFVQHFKGFQDDVTQKLKQTEERMTMLDRKTQTAARPHLAAAEVDGAPHQ
KAMQAYLRQGDEEGFRGLDLEGKAMSTAVNSDGGFLVDPQTADVVRSVLHSTASIRAVASVVNVEATSFDVLIDHSDVGA
GWATETGSVTETGTPSIDRIVIPLHELSALPKASQRLLDDSAFDIEGWLAGRIADKFARAEAQSFISGDGVDKPTGILTH
PTVDNGSWSWGNIGYVATGSDGGIGSADAIVDLVYALDARYRAGASFVMNSKTAGLIRKLKDADGRFLWSDGLQAGEPAR
LMGYPVLVAEDMPDVASDSLSIAFGDFAAGYTIAERPDLRVLRDPFSAKPHVLFYASKRVGGDVSDFAAIKLMKFGLS
>Mature_397_residues
TDHPFTGHAPEDAATPPQNVATEVKQAVSQFVQHFKGFQDDVTQKLKQTEERMTMLDRKTQTAARPHLAAAEVDGAPHQK
AMQAYLRQGDEEGFRGLDLEGKAMSTAVNSDGGFLVDPQTADVVRSVLHSTASIRAVASVVNVEATSFDVLIDHSDVGAG
WATETGSVTETGTPSIDRIVIPLHELSALPKASQRLLDDSAFDIEGWLAGRIADKFARAEAQSFISGDGVDKPTGILTHP
TVDNGSWSWGNIGYVATGSDGGIGSADAIVDLVYALDARYRAGASFVMNSKTAGLIRKLKDADGRFLWSDGLQAGEPARL
MGYPVLVAEDMPDVASDSLSIAFGDFAAGYTIAERPDLRVLRDPFSAKPHVLFYASKRVGGDVSDFAAIKLMKFGLS

Specific function: Unknown

COG id: COG4653

COG function: function code R; Predicted phage phi-C31 gp36 major capsid-like protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42499; Mature: 42368

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDHPFTGHAPEDAATPPQNVATEVKQAVSQFVQHFKGFQDDVTQKLKQTEERMTMLDRK
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
TQTAARPHLAAAEVDGAPHQKAMQAYLRQGDEEGFRGLDLEGKAMSTAVNSDGGFLVDPQ
HHHHCCCCCCHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHEEECCCCCEEECCC
TADVVRSVLHSTASIRAVASVVNVEATSFDVLIDHSDVGAGWATETGSVTETGTPSIDRI
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEE
VIPLHELSALPKASQRLLDDSAFDIEGWLAGRIADKFARAEAQSFISGDGVDKPTGILTH
EEEHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEC
PTVDNGSWSWGNIGYVATGSDGGIGSADAIVDLVYALDARYRAGASFVMNSKTAGLIRKL
CCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHH
KDADGRFLWSDGLQAGEPARLMGYPVLVAEDMPDVASDSLSIAFGDFAAGYTIAERPDLR
HCCCCCEEECCCCCCCCCHHHHCCEEEEECCCCCCCCCCEEEEECCHHCCCEECCCCCCH
VLRDPFSAKPHVLFYASKRVGGDVSDFAAIKLMKFGLS
HHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TDHPFTGHAPEDAATPPQNVATEVKQAVSQFVQHFKGFQDDVTQKLKQTEERMTMLDRK
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
TQTAARPHLAAAEVDGAPHQKAMQAYLRQGDEEGFRGLDLEGKAMSTAVNSDGGFLVDPQ
HHHHCCCCCCHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHEEECCCCCEEECCC
TADVVRSVLHSTASIRAVASVVNVEATSFDVLIDHSDVGAGWATETGSVTETGTPSIDRI
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEE
VIPLHELSALPKASQRLLDDSAFDIEGWLAGRIADKFARAEAQSFISGDGVDKPTGILTH
EEEHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEC
PTVDNGSWSWGNIGYVATGSDGGIGSADAIVDLVYALDARYRAGASFVMNSKTAGLIRKL
CCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHH
KDADGRFLWSDGLQAGEPARLMGYPVLVAEDMPDVASDSLSIAFGDFAAGYTIAERPDLR
HCCCCCEEECCCCCCCCCHHHHCCEEEEECCCCCCCCCCEEEEECCHHCCCEECCCCCCH
VLRDPFSAKPHVLFYASKRVGGDVSDFAAIKLMKFGLS
HHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA