| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080904
Identifier: 99080904
GI number: 99080904
Start: 1141707
End: 1142045
Strand: Direct
Name: 99080904
Synonym: TM1040_1063
Alternate gene names: NA
Gene position: 1141707-1142045 (Clockwise)
Preceding gene: 99080903
Following gene: 99080905
Centisome position: 35.67
GC content: 66.96
Gene sequence:
>339_bases ATGAGCGCGCCACGTCTGAACCGCCTGTTGCACCTCGAAGATCCACAAGCGACCGGTGACGGCGCCGGAGGGTTTGAGGT GACTTGGGTTGTGCTGGGCCAGCACTGGGCCGAGGTTGATGCGCTCACGGGGCGCGAAACGGGGCGCGGCGGCACCTCAC TGTCGCTCCAGCGCTATCGGATCATCCTGCGCGCCGCCCCTCAGGGCTCATCTGCGCGGCCCCGGCCGGACCAGCGGTTT CGCGAGGGCAGTCGCATCTACAAGATCGATGCGGTGGCCGAGCATGACCCGCAGGGGCGGTACCTCCAGTGTTTTGCAAC CGAGGAGCTGGCCACATGA
Upstream 100 bases:
>100_bases ACACCTCCTTGCATGCAGGCTGCATGCCCTTTGGGGTGGCGAGCCTCTTGGACCGCCACCGGATGCCGCGCCTGAGCCTG GCCCGGAGCGAGGTGCAATC
Downstream 100 bases:
>100_bases CCTATGCGCTGTCTCACAGCCTGCAAACCGCGGTATATCAACACCTTATGGCCGACGCGGCGCTGGCCGCCGAGGTGGGC ACTGCGATCTATGACATGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Head-Tail Adaptor
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MSAPRLNRLLHLEDPQATGDGAGGFEVTWVVLGQHWAEVDALTGRETGRGGTSLSLQRYRIILRAAPQGSSARPRPDQRF REGSRIYKIDAVAEHDPQGRYLQCFATEELAT
Sequences:
>Translated_112_residues MSAPRLNRLLHLEDPQATGDGAGGFEVTWVVLGQHWAEVDALTGRETGRGGTSLSLQRYRIILRAAPQGSSARPRPDQRF REGSRIYKIDAVAEHDPQGRYLQCFATEELAT >Mature_111_residues SAPRLNRLLHLEDPQATGDGAGGFEVTWVVLGQHWAEVDALTGRETGRGGTSLSLQRYRIILRAAPQGSSARPRPDQRFR EGSRIYKIDAVAEHDPQGRYLQCFATEELAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12404; Mature: 12273
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPRLNRLLHLEDPQATGDGAGGFEVTWVVLGQHWAEVDALTGRETGRGGTSLSLQRYR CCCCCCCCEEEECCCCCCCCCCCCEEEEEEEECCCHHHHHCCCCCCCCCCCCEEEHEEEE IILRAAPQGSSARPRPDQRFREGSRIYKIDAVAEHDPQGRYLQCFATEELAT EEEEECCCCCCCCCCCHHHHHCCCEEEEEEEECCCCCCCCEEEEEECCCCCC >Mature Secondary Structure SAPRLNRLLHLEDPQATGDGAGGFEVTWVVLGQHWAEVDALTGRETGRGGTSLSLQRYR CCCCCCCEEEECCCCCCCCCCCCEEEEEEEECCCHHHHHCCCCCCCCCCCCEEEHEEEE IILRAAPQGSSARPRPDQRFREGSRIYKIDAVAEHDPQGRYLQCFATEELAT EEEEECCCCCCCCCCCHHHHHCCCEEEEEEEECCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA