Definition | Ruegeria sp. TM1040, complete genome. |
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Accession | NC_008044 |
Length | 3,200,938 |
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The map label for this gene is 99080843
Identifier: 99080843
GI number: 99080843
Start: 1073472
End: 1073627
Strand: Direct
Name: 99080843
Synonym: TM1040_1002
Alternate gene names: NA
Gene position: 1073472-1073627 (Clockwise)
Preceding gene: 99080842
Following gene: 99080844
Centisome position: 33.54
GC content: 58.33
Gene sequence:
>156_bases ATGCCTGATTTGGGAAAATACGCAGAAACGGTTCTTTCGGCCTATGCTGTCTCGCTGGTGTTGCTGGTCGCGCTCCTGGT CGTGACCTTCCTGCGCGGGGCCAAGGTGCGCGCTGCGCTCAAAGACGTTGAGGAAAGGGTGCGCCGAAATGGCTAA
Upstream 100 bases:
>100_bases GGGTTCGGGGCGCTGTTTATCGCGCTGGTGCTCTATCGCACCGGTACCGAGATCCGCGCGCGCCGGATGTCGGCGCTGAT CGCACGCGAAAGGATGATGG
Downstream 100 bases:
>100_bases GATCTCTTTGATGATGGCTATTCCAGTGGTCGTCTTTTCCGGCTTTGTTGGCCTTGCCCTCGTGGGCATGGGCCGCGACG ATCCCGAAAGCCTGCCCTCG
Product: Heme exporter protein D (CcmD)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 51; Mature: 50
Protein sequence:
>51_residues MPDLGKYAETVLSAYAVSLVLLVALLVVTFLRGAKVRAALKDVEERVRRNG
Sequences:
>Translated_51_residues MPDLGKYAETVLSAYAVSLVLLVALLVVTFLRGAKVRAALKDVEERVRRNG >Mature_50_residues PDLGKYAETVLSAYAVSLVLLVALLVVTFLRGAKVRAALKDVEERVRRNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5573; Mature: 5442
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDLGKYAETVLSAYAVSLVLLVALLVVTFLRGAKVRAALKDVEERVRRNG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PDLGKYAETVLSAYAVSLVLLVALLVVTFLRGAKVRAALKDVEERVRRNG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA