| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080807
Identifier: 99080807
GI number: 99080807
Start: 1033845
End: 1034081
Strand: Reverse
Name: 99080807
Synonym: TM1040_0966
Alternate gene names: NA
Gene position: 1034081-1033845 (Counterclockwise)
Preceding gene: 99080808
Following gene: 99080801
Centisome position: 32.31
GC content: 62.87
Gene sequence:
>237_bases ATGACCGATGACGTCTGGAAGCGGCAGGAAATCGAGAGCCCTTGCATCAAACTCTGTGTTATTCAGCCGCAGACGCGGCT CTGCACCGGCTGCGCCCGTTCCATTGACGAAATCACCCGCTGGTCCAAGATGAGTCCGGCGGAGCGTGCAGAAATCATGG CGGCCTTGCCGACTCGCACTGCGGCCCCCAAGGCACGCCGTGGGGGGCGCGCCGCTCGCTTGCAGAGCAAATCCTGA
Upstream 100 bases:
>100_bases GTCTCGAAAACGTCGCGCAGAGGTGATCGACCATGTGGCGGCGTCGTATATCCTGCAGGGGGCGCTGGATCGGATGCGCC ACATCAGGAGCAGTTAGACC
Downstream 100 bases:
>100_bases GCGGGCTTGCGCCCGCGGCCTCCGGCGGGGATATTTTTGCGTTAGAATTAGAAGAAGCTGGGCGCTGCGATCAGCAGTTC TGTTGCGGTATGCAGGCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MTDDVWKRQEIESPCIKLCVIQPQTRLCTGCARSIDEITRWSKMSPAERAEIMAALPTRTAAPKARRGGRAARLQSKS
Sequences:
>Translated_78_residues MTDDVWKRQEIESPCIKLCVIQPQTRLCTGCARSIDEITRWSKMSPAERAEIMAALPTRTAAPKARRGGRAARLQSKS >Mature_77_residues TDDVWKRQEIESPCIKLCVIQPQTRLCTGCARSIDEITRWSKMSPAERAEIMAALPTRTAAPKARRGGRAARLQSKS
Specific function: Unknown
COG id: COG3313
COG function: function code R; Predicted Fe-S protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8729; Mature: 8598
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 9.0 %Cys+Met (Translated Protein) 5.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDDVWKRQEIESPCIKLCVIQPQTRLCTGCARSIDEITRWSKMSPAERAEIMAALPTRT CCCCHHHHHHHCCCHHEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC AAPKARRGGRAARLQSKS CCCCCCCCCCCCCCCCCC >Mature Secondary Structure TDDVWKRQEIESPCIKLCVIQPQTRLCTGCARSIDEITRWSKMSPAERAEIMAALPTRT CCCHHHHHHHCCCHHEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC AAPKARRGGRAARLQSKS CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA