Click here to switch to the map view.

The map label for this gene is 99080753

Identifier: 99080753

GI number: 99080753

Start: 973041

End: 975563

Strand: Reverse

Name: 99080753

Synonym: TM1040_0912

Alternate gene names: NA

Gene position: 975563-973041 (Counterclockwise)

Preceding gene: 99080754

Following gene: 99080752

Centisome position: 30.48

GC content: 65.99

Gene sequence:

>2523_bases
ATGCGCAAGACCGATGCGCCGCAGCCAATAAAGGGTCGCCCCATGTCCAAGTCCCCTGACGCCTTTCGCACCATCAGCGA
GGTAGCAGAATGGCTGGATGTACCGGCGCATGTGCTGCGGTTCTGGGAAAGTAAGTTCACGCAGGTCAAACCCGTCAAAC
GCGCCGGTGGACGGCGCTACTATCGCCCAACGGATATGTTGCTTCTGGGCGGTATTCAGCACCTCCTGCACGAAGAAGGT
CTGTCGATCAAAGAGGCACAAGCCCTGTTGCGCGAAGAGGGCATCCAGCATGTGCAGTCGCTCTCCAAGCCGCTCGACGG
CGACCAAGAGGACGAATCAGCGATTGAGGCCAAACCAGCGAGCAAATGGGTTGAGCCATCTGAGGTCGAAAAGCCCAAGG
CCCCGCTGGTAGACCGCGATCCCCCCGGCGCCGAAGAGCAATCGGAGCGCAAAGCGGCTCCGCCACCGCCACCGCCCTAC
CCCGCAACCCCGCCCGCGCCGACCGCTCCCGTGACGCCTGCAGCGGCTACGCCCCCCGTTGCGCCGGGCGACAGCATGGC
CCCGCCTCAGGGCCAGACACCCGCAGCCGCCTCTGCAAATGCATCCAGCGCGGCAACATCTGCCCCGGCGGAGAACGTAG
CTTCCTCGGGGCCTGCCGAGAGCCCGGCGTCCACCGAGACCCCGTCCCAGCCTACGACTCCTCCTGCGGCATCCCCTTCA
CTGGGGGCGGAGGCTGGCGCTGGTCAGGACGCGGACGCGGCCCCACTGGGCACACCGCCTTCTGTACCGCCTGCCGCGCC
GTCGCCTGCGCCCGCTGACGCAGGACCAGCCACGCCGCCCGCGCAAACGCCGCCTGCCGCTCCTGCTTCCTCCGCTGCCC
CCTCGGAGGCCGCCGCCGCATCTTTGCACCAAACACCGAGTGAGTTTGCCCCCACCAGCGATACTGCGCCAGCCGTGCGC
AGCCCTTCCACACCGGAAGGCGCTGCTGAGGATAGTGCGCCACAGGAAGGCGATCACGCGCGCGCCCATGTGGGCGGCGC
GCAGACGCCGCAGACATCCGCAGGTCAAATGGCGATGCCCATGGACCTTCCAAATGCCGCCGCACCGCAACGGGATATGG
CCTCACAGGCCCAGGCCGTGCGTGCGGCCACAACACCTTCCTCTGCCACTGTTGCCCCCTCTTCGGCATCGAATTCCGAC
CAGCAGGATTTCTTTGCCGCAGCCGCAGATGCGCAAAACGCCGGGCAAGCACCGGCGTCCGACAGCGCAGCTGTTGCCTC
CGATCCGCCTGCGCCTAACCCAACTCAGCCCGCCCCGGCGCAGCCTGATCCACTGGCGCAACAAGAGTCACAGATGTCCG
CGCCGCCTGTCGGGACGCCCCCTGCCGAGGATCTGGTTGCAGAGGCACCGGTTGCGGATGCACCTGCGGACGATCTCGCA
GGCGATCCCGTCGCGGATCAGGCGGAGACAGTTCACGGATCTGCAACCGATGCGGAGTCGACAGAGGCTGTTTCTAAGGG
ATCAACCGCGCCGGTTGCAGACGCGCGCCCCGCCAACCTTACGTCTGACCAGATTTCAACCGAGGTCTCTTTTACAGGAG
AAGCACCGCAGCAGATGGCGGCTCAGGCGTCAGCGCCAGATGCTCTCTTCGCCGGGACGACGCAAGAACCCGATACGGTT
CAAGCATCTGATTCTGTGACTGAAACCCCCGAGGCCTTGCAACCCATTGAGGGCAGTGCAGGCGTCGACGAGACGGCGAT
CCAATCTCTTGCCTCGGACGACCCCAGTTCTGAGCCCGCACTGGACGCGCCCGCATTCGACTCGCCGGGCTCTCAACACC
CGCCCGCCGACGAACCCGCGCCTGTTCAACCTGTCTCCGACGAGCCAGTGTCTTCGGACTTGGCGGCCATAGAGGAAACA
AACGCCGATCCGGCAGCGCAGATGGCCAGCGCCCTGGCAGAGGCCACCGCTCCCGTGGCTGAGACCACCGAATCCGCTCC
CTCAGATGTCGACATCACGGGCGCGGACGATAGCGATGTGTCCGCAGTAGAAGAACCCGCGTCTGAGATGCCTCACGCCG
AGGTCGAGGCGTCCGATTCGCATACCGAAACCTCGGATCAGGATCCCGCCCCCGCATTGGATGTGACCGATGCGATGACG
GACACCGCAGCCGAGGCCGCACCAGAGGCAGACCCGCAGTCCGCGCCTGATGCAGGCCCCTTTGAGGACAATGCGGAGAC
CGCCGAAGAACGTGACGCCGCTGCCCCGGTCACAGATGAGGCCGAAGACGCCGCAGCCCTGGATCAGTTCCCAGAGACAG
AGCGCACACCTTTGGCGGCTGACTCGACGCCCACAGCGGAGTCGCCGCGCCCGCGGGTGATCGAGGTTTCCGACACCCCT
GAGGGCAGCTTTGCCGCCGGACCTCTTCAGCGCCTCTCGCGCCTCGGTACACTGACGGCAGCGCAACAAGGCGCGTTGCG
CGAGATTGCAACCGCTTTGCGCGAGATCGCCTCCCGGCACTGA

Upstream 100 bases:

>100_bases
ACCTGATGAAAGATCGCGTCGCGGACGGCAACAAAAGTTAACCGTCTTCGCCGATCATACCAAATGAAGCACCGGCCCCC
GTTTGCGGGGCCATACCCAT

Downstream 100 bases:

>100_bases
TCGGGGAGCATTGGGTCCAATGAGAGGCGCATTGAAAAAGCGAGAAAAAATAAATTTCGCCTCTTGCCCCTGCCGCAAAA
AGCAGTAGAAAGCTCCCACA

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 840; Mature: 840

Protein sequence:

>840_residues
MRKTDAPQPIKGRPMSKSPDAFRTISEVAEWLDVPAHVLRFWESKFTQVKPVKRAGGRRYYRPTDMLLLGGIQHLLHEEG
LSIKEAQALLREEGIQHVQSLSKPLDGDQEDESAIEAKPASKWVEPSEVEKPKAPLVDRDPPGAEEQSERKAAPPPPPPY
PATPPAPTAPVTPAAATPPVAPGDSMAPPQGQTPAAASANASSAATSAPAENVASSGPAESPASTETPSQPTTPPAASPS
LGAEAGAGQDADAAPLGTPPSVPPAAPSPAPADAGPATPPAQTPPAAPASSAAPSEAAAASLHQTPSEFAPTSDTAPAVR
SPSTPEGAAEDSAPQEGDHARAHVGGAQTPQTSAGQMAMPMDLPNAAAPQRDMASQAQAVRAATTPSSATVAPSSASNSD
QQDFFAAAADAQNAGQAPASDSAAVASDPPAPNPTQPAPAQPDPLAQQESQMSAPPVGTPPAEDLVAEAPVADAPADDLA
GDPVADQAETVHGSATDAESTEAVSKGSTAPVADARPANLTSDQISTEVSFTGEAPQQMAAQASAPDALFAGTTQEPDTV
QASDSVTETPEALQPIEGSAGVDETAIQSLASDDPSSEPALDAPAFDSPGSQHPPADEPAPVQPVSDEPVSSDLAAIEET
NADPAAQMASALAEATAPVAETTESAPSDVDITGADDSDVSAVEEPASEMPHAEVEASDSHTETSDQDPAPALDVTDAMT
DTAAEAAPEADPQSAPDAGPFEDNAETAEERDAAAPVTDEAEDAAALDQFPETERTPLAADSTPTAESPRPRVIEVSDTP
EGSFAAGPLQRLSRLGTLTAAQQGALREIATALREIASRH

Sequences:

>Translated_840_residues
MRKTDAPQPIKGRPMSKSPDAFRTISEVAEWLDVPAHVLRFWESKFTQVKPVKRAGGRRYYRPTDMLLLGGIQHLLHEEG
LSIKEAQALLREEGIQHVQSLSKPLDGDQEDESAIEAKPASKWVEPSEVEKPKAPLVDRDPPGAEEQSERKAAPPPPPPY
PATPPAPTAPVTPAAATPPVAPGDSMAPPQGQTPAAASANASSAATSAPAENVASSGPAESPASTETPSQPTTPPAASPS
LGAEAGAGQDADAAPLGTPPSVPPAAPSPAPADAGPATPPAQTPPAAPASSAAPSEAAAASLHQTPSEFAPTSDTAPAVR
SPSTPEGAAEDSAPQEGDHARAHVGGAQTPQTSAGQMAMPMDLPNAAAPQRDMASQAQAVRAATTPSSATVAPSSASNSD
QQDFFAAAADAQNAGQAPASDSAAVASDPPAPNPTQPAPAQPDPLAQQESQMSAPPVGTPPAEDLVAEAPVADAPADDLA
GDPVADQAETVHGSATDAESTEAVSKGSTAPVADARPANLTSDQISTEVSFTGEAPQQMAAQASAPDALFAGTTQEPDTV
QASDSVTETPEALQPIEGSAGVDETAIQSLASDDPSSEPALDAPAFDSPGSQHPPADEPAPVQPVSDEPVSSDLAAIEET
NADPAAQMASALAEATAPVAETTESAPSDVDITGADDSDVSAVEEPASEMPHAEVEASDSHTETSDQDPAPALDVTDAMT
DTAAEAAPEADPQSAPDAGPFEDNAETAEERDAAAPVTDEAEDAAALDQFPETERTPLAADSTPTAESPRPRVIEVSDTP
EGSFAAGPLQRLSRLGTLTAAQQGALREIATALREIASRH
>Mature_840_residues
MRKTDAPQPIKGRPMSKSPDAFRTISEVAEWLDVPAHVLRFWESKFTQVKPVKRAGGRRYYRPTDMLLLGGIQHLLHEEG
LSIKEAQALLREEGIQHVQSLSKPLDGDQEDESAIEAKPASKWVEPSEVEKPKAPLVDRDPPGAEEQSERKAAPPPPPPY
PATPPAPTAPVTPAAATPPVAPGDSMAPPQGQTPAAASANASSAATSAPAENVASSGPAESPASTETPSQPTTPPAASPS
LGAEAGAGQDADAAPLGTPPSVPPAAPSPAPADAGPATPPAQTPPAAPASSAAPSEAAAASLHQTPSEFAPTSDTAPAVR
SPSTPEGAAEDSAPQEGDHARAHVGGAQTPQTSAGQMAMPMDLPNAAAPQRDMASQAQAVRAATTPSSATVAPSSASNSD
QQDFFAAAADAQNAGQAPASDSAAVASDPPAPNPTQPAPAQPDPLAQQESQMSAPPVGTPPAEDLVAEAPVADAPADDLA
GDPVADQAETVHGSATDAESTEAVSKGSTAPVADARPANLTSDQISTEVSFTGEAPQQMAAQASAPDALFAGTTQEPDTV
QASDSVTETPEALQPIEGSAGVDETAIQSLASDDPSSEPALDAPAFDSPGSQHPPADEPAPVQPVSDEPVSSDLAAIEET
NADPAAQMASALAEATAPVAETTESAPSDVDITGADDSDVSAVEEPASEMPHAEVEASDSHTETSDQDPAPALDVTDAMT
DTAAEAAPEADPQSAPDAGPFEDNAETAEERDAAAPVTDEAEDAAALDQFPETERTPLAADSTPTAESPRPRVIEVSDTP
EGSFAAGPLQRLSRLGTLTAAQQGALREIATALREIASRH

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551 [H]

Pfam domain/function: PF00376 MerR [H]

EC number: NA

Molecular weight: Translated: 84672; Mature: 84672

Theoretical pI: Translated: 3.80; Mature: 3.80

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKTDAPQPIKGRPMSKSPDAFRTISEVAEWLDVPAHVLRFWESKFTQVKPVKRAGGRRY
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCC
YRPTDMLLLGGIQHLLHEEGLSIKEAQALLREEGIQHVQSLSKPLDGDQEDESAIEAKPA
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCH
SKWVEPSEVEKPKAPLVDRDPPGAEEQSERKAAPPPPPPYPATPPAPTAPVTPAAATPPV
HHCCCHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APGDSMAPPQGQTPAAASANASSAATSAPAENVASSGPAESPASTETPSQPTTPPAASPS
CCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
LGAEAGAGQDADAAPLGTPPSVPPAAPSPAPADAGPATPPAQTPPAAPASSAAPSEAAAA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
SLHQTPSEFAPTSDTAPAVRSPSTPEGAAEDSAPQEGDHARAHVGGAQTPQTSAGQMAMP
HHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEECC
MDLPNAAAPQRDMASQAQAVRAATTPSSATVAPSSASNSDQQDFFAAAADAQNAGQAPAS
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHCCHHCCCCCCC
DSAAVASDPPAPNPTQPAPAQPDPLAQQESQMSAPPVGTPPAEDLVAEAPVADAPADDLA
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCHHHCC
GDPVADQAETVHGSATDAESTEAVSKGSTAPVADARPANLTSDQISTEVSFTGEAPQQMA
CCCCCCHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHCCEEEECCCCHHHHH
AQASAPDALFAGTTQEPDTVQASDSVTETPEALQPIEGSAGVDETAIQSLASDDPSSEPA
HHCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCC
LDAPAFDSPGSQHPPADEPAPVQPVSDEPVSSDLAAIEETNADPAAQMASALAEATAPVA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCHH
ETTESAPSDVDITGADDSDVSAVEEPASEMPHAEVEASDSHTETSDQDPAPALDVTDAMT
HHHCCCCCCEEEECCCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCHHHHHHH
DTAAEAAPEADPQSAPDAGPFEDNAETAEERDAAAPVTDEAEDAAALDQFPETERTPLAA
HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCC
DSTPTAESPRPRVIEVSDTPEGSFAAGPLQRLSRLGTLTAAQQGALREIATALREIASRH
CCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRKTDAPQPIKGRPMSKSPDAFRTISEVAEWLDVPAHVLRFWESKFTQVKPVKRAGGRRY
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCC
YRPTDMLLLGGIQHLLHEEGLSIKEAQALLREEGIQHVQSLSKPLDGDQEDESAIEAKPA
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCH
SKWVEPSEVEKPKAPLVDRDPPGAEEQSERKAAPPPPPPYPATPPAPTAPVTPAAATPPV
HHCCCHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APGDSMAPPQGQTPAAASANASSAATSAPAENVASSGPAESPASTETPSQPTTPPAASPS
CCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
LGAEAGAGQDADAAPLGTPPSVPPAAPSPAPADAGPATPPAQTPPAAPASSAAPSEAAAA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
SLHQTPSEFAPTSDTAPAVRSPSTPEGAAEDSAPQEGDHARAHVGGAQTPQTSAGQMAMP
HHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEECC
MDLPNAAAPQRDMASQAQAVRAATTPSSATVAPSSASNSDQQDFFAAAADAQNAGQAPAS
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHCCHHCCCCCCC
DSAAVASDPPAPNPTQPAPAQPDPLAQQESQMSAPPVGTPPAEDLVAEAPVADAPADDLA
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCHHHCC
GDPVADQAETVHGSATDAESTEAVSKGSTAPVADARPANLTSDQISTEVSFTGEAPQQMA
CCCCCCHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHCCEEEECCCCHHHHH
AQASAPDALFAGTTQEPDTVQASDSVTETPEALQPIEGSAGVDETAIQSLASDDPSSEPA
HHCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCC
LDAPAFDSPGSQHPPADEPAPVQPVSDEPVSSDLAAIEETNADPAAQMASALAEATAPVA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCHH
ETTESAPSDVDITGADDSDVSAVEEPASEMPHAEVEASDSHTETSDQDPAPALDVTDAMT
HHHCCCCCCEEEECCCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCHHHHHHH
DTAAEAAPEADPQSAPDAGPFEDNAETAEERDAAAPVTDEAEDAAALDQFPETERTPLAA
HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCC
DSTPTAESPRPRVIEVSDTPEGSFAAGPLQRLSRLGTLTAAQQGALREIATALREIASRH
CCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1961742 [H]