The gene/protein map for NC_008044 is currently unavailable.
Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

Click here to switch to the map view.

The map label for this gene is 99080712

Identifier: 99080712

GI number: 99080712

Start: 928914

End: 929723

Strand: Direct

Name: 99080712

Synonym: TM1040_0871

Alternate gene names: NA

Gene position: 928914-929723 (Clockwise)

Preceding gene: 99080711

Following gene: 99080714

Centisome position: 29.02

GC content: 59.26

Gene sequence:

>810_bases
ATGACGCAAACCACAGAAACACCGACCGCGCCTCTTACGCGACCGCTTGGGGTGCCGGACCTCAGACCCGTGAGCGCTGG
CACCCTCAGAGACGCGCTCAGGGCAGGCTGGCGGGACTTTTGCGCCAAACCCATCTATGGGCTCATCTTTGCGGGGTTTT
ATGTGCTCGCAGGCTGGGTCATGGCCTGGGTGACGCTGCAAACGCAGACAAGTTACTGGCTGGTTCTCGCGGCCATCGGC
TTTCCGCTGATTGGTCCTTTTGCAGCGGTTGGGCTTTATGAGGTCTCGCATCGGATCGAAGCAGGGCGCAGACTGGACGC
CGGGCGGATCTTTGGCGTGATCTTCGAGCAAAGCCGCCGCCAGCTGCCGTCGATCTGCGCCATCATCATCGTTGTATTTC
TGTTCTGGTTCTTCCTCGGGCATATGATTTTTGCGCTGTTTCTGGGCCACATGCCGATGGTCAATGTCTCCACCTCGACC
GAAGTCTTCCTCACCCCGCAGGGGCTCATGATGCTCGGGGTCGGAACCGTTGTCGGTGCGCTCTTTGCACTCCTGATTTA
TATGATCACCGTACTCGGGCTGCCGCTTCTGCTGGACCGTGAGATCGACTTTGTCACCGCGATGATCACCAGTTTTACCT
ATGTGCAGGCGAACCTCCTATGGATGCTTGCCTGGGCCGTGCTGATCGCCACGCTCACCTTTGTCGCGCTTTTGCCGGGG
TTTTTCGGGCTCTTGGTGGTGCTGCCCTGGCTGGGGCATTCGAGTTGGCACCTTTACCGGCTCCTGCGCGTAGAGGAGGA
CCCTACCTGA

Upstream 100 bases:

>100_bases
CCTCGGGCTTGGGCAGGGATATCACACCGCGCGCGCCGCGCTCTAGCTCCGGCACCCGATCAGATCGCATGTGCATTGCA
TAGGGAGGCTCTGCAAGACG

Downstream 100 bases:

>100_bases
AGGGTTTGCCGAGCTGCAGAAGCCGCCGGTGAAAGGGGATGATCTCGGGTGCGGTGGTGAAACCGCAGCCTCTTGCGGCC
TTGATCGCCGCGCTTACATC

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Protein; Integral Membrane-Like Protein; Transmembrane Protein; Conserved Integral Membrane Protein; Integral Membrane Protein-Like Protein; Integral Membrane Protein-Like

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MTQTTETPTAPLTRPLGVPDLRPVSAGTLRDALRAGWRDFCAKPIYGLIFAGFYVLAGWVMAWVTLQTQTSYWLVLAAIG
FPLIGPFAAVGLYEVSHRIEAGRRLDAGRIFGVIFEQSRRQLPSICAIIIVVFLFWFFLGHMIFALFLGHMPMVNVSTST
EVFLTPQGLMMLGVGTVVGALFALLIYMITVLGLPLLLDREIDFVTAMITSFTYVQANLLWMLAWAVLIATLTFVALLPG
FFGLLVVLPWLGHSSWHLYRLLRVEEDPT

Sequences:

>Translated_269_residues
MTQTTETPTAPLTRPLGVPDLRPVSAGTLRDALRAGWRDFCAKPIYGLIFAGFYVLAGWVMAWVTLQTQTSYWLVLAAIG
FPLIGPFAAVGLYEVSHRIEAGRRLDAGRIFGVIFEQSRRQLPSICAIIIVVFLFWFFLGHMIFALFLGHMPMVNVSTST
EVFLTPQGLMMLGVGTVVGALFALLIYMITVLGLPLLLDREIDFVTAMITSFTYVQANLLWMLAWAVLIATLTFVALLPG
FFGLLVVLPWLGHSSWHLYRLLRVEEDPT
>Mature_268_residues
TQTTETPTAPLTRPLGVPDLRPVSAGTLRDALRAGWRDFCAKPIYGLIFAGFYVLAGWVMAWVTLQTQTSYWLVLAAIGF
PLIGPFAAVGLYEVSHRIEAGRRLDAGRIFGVIFEQSRRQLPSICAIIIVVFLFWFFLGHMIFALFLGHMPMVNVSTSTE
VFLTPQGLMMLGVGTVVGALFALLIYMITVLGLPLLLDREIDFVTAMITSFTYVQANLLWMLAWAVLIATLTFVALLPGF
FGLLVVLPWLGHSSWHLYRLLRVEEDPT

Specific function: Unknown

COG id: COG5473

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29942; Mature: 29811

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TQTTETPTAPLTRPLGVPDLRPVSAGTLRDALRAGWRDFCAKPIYGLIFAGFYVLAGWV
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAWVTLQTQTSYWLVLAAIGFPLIGPFAAVGLYEVSHRIEAGRRLDAGRIFGVIFEQSRR
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
QLPSICAIIIVVFLFWFFLGHMIFALFLGHMPMVNVSTSTEVFLTPQGLMMLGVGTVVGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEECCCCHHHHHHHHHHHH
LFALLIYMITVLGLPLLLDREIDFVTAMITSFTYVQANLLWMLAWAVLIATLTFVALLPG
HHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFGLLVVLPWLGHSSWHLYRLLRVEEDPT
HHHHHHHHHHCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA