Definition | Ruegeria sp. TM1040, complete genome. |
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Accession | NC_008044 |
Length | 3,200,938 |
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The map label for this gene is 99080618
Identifier: 99080618
GI number: 99080618
Start: 833487
End: 833819
Strand: Reverse
Name: 99080618
Synonym: TM1040_0777
Alternate gene names: NA
Gene position: 833819-833487 (Counterclockwise)
Preceding gene: 99080619
Following gene: 99080617
Centisome position: 26.05
GC content: 56.76
Gene sequence:
>333_bases ATGGTGGCTGATATTCGAGGATGGGGGTATCTGACGGGGAAGGGCCAGGCACTTGCTTTGACAGAAAGAGAGGCAGAGCA AGCTCAGAAGAAAACCGCTCAATTCATCGCTGACGCCATGAACGAAAAGTTTGAGCGTGACACCCTCGCCAATCAGGTCG AGGACTGCGCCCGCACCTGCGCGGAACAGGCAGAGCAAATCCTAAACTTGCAGAATGCATGCAAGGCAGTCCTCCCCCTG ATGCAGGCAGCAGATCGTGAGGAAGTCACAGACGTTCAAGACTGGCACGCAGCGGAGGCGCTGATCCATGCTGCACTGGA GGGCTCGCAGTGA
Upstream 100 bases:
>100_bases ACCAAAGCTTCCAGATATTCCGACATTTGCGCGCCCTCCCTTCAAGACAGATGCGTATGGCCTGAAAATATGGGGCGTCG ATGAGTTTGGCGGTGCGTGC
Downstream 100 bases:
>100_bases GCCCGCAAACGCTCTTGCGCCAGCGCATCGAGACTCACCGTCGCGCGATACGATCCGGGGATCTCATCGAGATCAATCGC ACTTGGGACGATCTGGAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MVADIRGWGYLTGKGQALALTEREAEQAQKKTAQFIADAMNEKFERDTLANQVEDCARTCAEQAEQILNLQNACKAVLPL MQAADREEVTDVQDWHAAEALIHAALEGSQ
Sequences:
>Translated_110_residues MVADIRGWGYLTGKGQALALTEREAEQAQKKTAQFIADAMNEKFERDTLANQVEDCARTCAEQAEQILNLQNACKAVLPL MQAADREEVTDVQDWHAAEALIHAALEGSQ >Mature_110_residues MVADIRGWGYLTGKGQALALTEREAEQAQKKTAQFIADAMNEKFERDTLANQVEDCARTCAEQAEQILNLQNACKAVLPL MQAADREEVTDVQDWHAAEALIHAALEGSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12117; Mature: 12117
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVADIRGWGYLTGKGQALALTEREAEQAQKKTAQFIADAMNEKFERDTLANQVEDCARTC CCCCCCCCEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEQAEQILNLQNACKAVLPLMQAADREEVTDVQDWHAAEALIHAALEGSQ HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVADIRGWGYLTGKGQALALTEREAEQAQKKTAQFIADAMNEKFERDTLANQVEDCARTC CCCCCCCCEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEQAEQILNLQNACKAVLPLMQAADREEVTDVQDWHAAEALIHAALEGSQ HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA