The gene/protein map for NC_008044 is currently unavailable.
Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

Click here to switch to the map view.

The map label for this gene is 99080612

Identifier: 99080612

GI number: 99080612

Start: 826781

End: 827053

Strand: Reverse

Name: 99080612

Synonym: TM1040_0771

Alternate gene names: NA

Gene position: 827053-826781 (Counterclockwise)

Preceding gene: 99080613

Following gene: 99080610

Centisome position: 25.84

GC content: 60.07

Gene sequence:

>273_bases
GTGATACGGCCAGCAGTTTGGCTGATCGCAGCGAGTTTGGGGCCAAGCGCATGCATCGCCCCGCTGCCCTTGCCGGAAGA
CGCAAAGACAATTGGTATTCAGAGCGCTGCGATGGAACGTAAAGAAGCCGTAGCCCCACGCACCGTTTTTGTTGCCGACA
GCGCCGTCACTGAAATTGCCGGAGCCTCTTGTGAGGTGCGGCAGGGCGCGCGGCAACATCACAAGGTGAAGACCCCGGCC
AAACTCGCCTTTGCTGTGACACCCGGCACATAG

Upstream 100 bases:

>100_bases
TTGCATCGGTGAAAGGTGTGATCAAGTCTTCTCGCGACGCCACCAATGACAAGTTCCGCTACCCGGGCCGGATCGAGGTG
AACCTGCAGCCGGTAAAAAA

Downstream 100 bases:

>100_bases
GAGACCATTACAGTACAATGTACTGCGGTTATCAGCGCGCGACAGCAAGTGGTGAAACGTGTGGTTCGTTTTGACAAAAT
CACGGAGCCACAAGAACGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MIRPAVWLIAASLGPSACIAPLPLPEDAKTIGIQSAAMERKEAVAPRTVFVADSAVTEIAGASCEVRQGARQHHKVKTPA
KLAFAVTPGT

Sequences:

>Translated_90_residues
MIRPAVWLIAASLGPSACIAPLPLPEDAKTIGIQSAAMERKEAVAPRTVFVADSAVTEIAGASCEVRQGARQHHKVKTPA
KLAFAVTPGT
>Mature_90_residues
MIRPAVWLIAASLGPSACIAPLPLPEDAKTIGIQSAAMERKEAVAPRTVFVADSAVTEIAGASCEVRQGARQHHKVKTPA
KLAFAVTPGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9345; Mature: 9345

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRPAVWLIAASLGPSACIAPLPLPEDAKTIGIQSAAMERKEAVAPRTVFVADSAVTEIA
CCCCCEEEEEECCCCCCCCCCCCCCCCCCHHCHHHHHHHHHHCCCCEEEEEECCHHHHHC
GASCEVRQGARQHHKVKTPAKLAFAVTPGT
CCCCHHHHHHHHHCCCCCCCEEEEEECCCC
>Mature Secondary Structure
MIRPAVWLIAASLGPSACIAPLPLPEDAKTIGIQSAAMERKEAVAPRTVFVADSAVTEIA
CCCCCEEEEEECCCCCCCCCCCCCCCCCCHHCHHHHHHHHHHCCCCEEEEEECCHHHHHC
GASCEVRQGARQHHKVKTPAKLAFAVTPGT
CCCCHHHHHHHHHCCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA