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The map label for this gene is rimK [H]

Identifier: 99080610

GI number: 99080610

Start: 823906

End: 825321

Strand: Reverse

Name: rimK [H]

Synonym: TM1040_0769

Alternate gene names: 99080610

Gene position: 825321-823906 (Counterclockwise)

Preceding gene: 99080612

Following gene: 99080609

Centisome position: 25.78

GC content: 61.79

Gene sequence:

>1416_bases
ATGTCCACAGATGACCCGAACCAGAACCTACGTCTAGGCTGGGAGGAATGGGTCAGATTGCCCGAACTCGGCCTGCCCGC
CCTGCGTGCAAAGGTCGATACCGGCGCTCGGACCTCGGCCCTTCACGCCACCGACATCGAGACCTTCGGCCCTGCGAAGG
CCCCCAAGGTCCGCTTCACCGTGCATCCGATCCCGGGGCGCGATGACCTGCTGATCCCGTGTTCCGCTGCCATCAAAGAC
CGCCGCGAAGTAACATCATCCAATGGCGATCGCGAGATGCGCTATGTCATCGAGACCAACCTGGAAATCGGCGGTCAGGT
CTGGCCGGTGGAAGTCACGCTGACGGATCGGCGCGGCATGGCGCTGCATATGCTACTGGGCCGTCAGGCGCTCACGGAGA
ATATCTCTGTGGTGCCGTCGGAACGCTACTGCCAGCCCGAACTTGACTATTCGGTCTATGCCACGCCCGCGATCCGAAAG
AAGGCCCCCAACCGCGCGCTGCGCATTGCAGTTCTGAGCCGCGAAGACAACTACTCCACCCGCCGCCTGGTCGAGGAAGG
CGAGCGGCGCGGCCATTCGGTTGAGGTGATCGACACGACGCGGTGCTACATGTCGATCAACGCTCTGGCGCCAGAGATCC
ACTATGATGGCAAACGCCTGCCGCGCTATGACGCGGTGATCCCCCGTATCGGCGCCTCGGTCACTCAATATGGCACCGCT
CTGCTGCGCCAGTTCGAGACGCTTGGGACCTATTGCGTCAACGGCAGCGACGGCATTACTGCGAGCCGAGACAAGCTGCA
TGCCCATCAGATGCTGGCCCGCCACAAGATCGGCATGCCCGCCACCGCTTTTGCTGCCTCTCCCAAGGATACAAATGCCC
TGATCGACATTGTTGGCGGCGCGCCTTTGATCGTGAAACTGCTGGAAAGCACCCAGGGCAAAGGCGTGGTGCTGGCCGAA
ACCAAGAAGGCCGCTGAATCCGTGATCACGGCTTTTCGCGGTCTCAAGGCCAACTTCCTCGTGCAGCAATTTGTCAAAGA
GGCCGCAGGCGTCGATATTCGTTGCTTTGTAGTTGGCTCCAAAGTGGTGGCGGCGATGAAACGCTCCGGCGCGGAGGGCG
ACTTCCGCTCCAACCTGCATCTGGGCGGGAGCGCGGTTTCAGTGCGTATCACCAAAGAGGAACGCGCCACGGCCATCCGC
GCCGCACGCTGCTTTGGCCTTGGTGTTGCAGGCGTTGATCTCTTGCGCTCAGAGACCGGCCCCAAGGTGCTGGAGGTCAA
TTCTTCGCCCGGTCTTGAGGGCATCGAGAAGACGTCAAAGAAAGACATTGCCGCCCTGATTCACGACGAGATCGAAGCCA
ATGTCCGTCCCACCCCGCTGCGCACGCGCAAGGCGCTGGGCGACGCCGCCGAATAG

Upstream 100 bases:

>100_bases
TGTCATTTCAAAGTTGAAAAGCTCTGCCATCTCATGTTCCTGCATCAAACTCTGCACCGCGTGTGCGGTGATTCACCCCT
AATGCCAAGGAGGCGTCCTC

Downstream 100 bases:

>100_bases
GCCATGCTACATCCCTGCGCCCTTTCCCCTTGACGCTCCGACGTTGAGGGGAAACCCTGCGCGCATCCTTTTTAGTCGCG
GAATTTTCCTATGACAGAAC

Product: SSU ribosomal protein S6P modification protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 471; Mature: 470

Protein sequence:

>471_residues
MSTDDPNQNLRLGWEEWVRLPELGLPALRAKVDTGARTSALHATDIETFGPAKAPKVRFTVHPIPGRDDLLIPCSAAIKD
RREVTSSNGDREMRYVIETNLEIGGQVWPVEVTLTDRRGMALHMLLGRQALTENISVVPSERYCQPELDYSVYATPAIRK
KAPNRALRIAVLSREDNYSTRRLVEEGERRGHSVEVIDTTRCYMSINALAPEIHYDGKRLPRYDAVIPRIGASVTQYGTA
LLRQFETLGTYCVNGSDGITASRDKLHAHQMLARHKIGMPATAFAASPKDTNALIDIVGGAPLIVKLLESTQGKGVVLAE
TKKAAESVITAFRGLKANFLVQQFVKEAAGVDIRCFVVGSKVVAAMKRSGAEGDFRSNLHLGGSAVSVRITKEERATAIR
AARCFGLGVAGVDLLRSETGPKVLEVNSSPGLEGIEKTSKKDIAALIHDEIEANVRPTPLRTRKALGDAAE

Sequences:

>Translated_471_residues
MSTDDPNQNLRLGWEEWVRLPELGLPALRAKVDTGARTSALHATDIETFGPAKAPKVRFTVHPIPGRDDLLIPCSAAIKD
RREVTSSNGDREMRYVIETNLEIGGQVWPVEVTLTDRRGMALHMLLGRQALTENISVVPSERYCQPELDYSVYATPAIRK
KAPNRALRIAVLSREDNYSTRRLVEEGERRGHSVEVIDTTRCYMSINALAPEIHYDGKRLPRYDAVIPRIGASVTQYGTA
LLRQFETLGTYCVNGSDGITASRDKLHAHQMLARHKIGMPATAFAASPKDTNALIDIVGGAPLIVKLLESTQGKGVVLAE
TKKAAESVITAFRGLKANFLVQQFVKEAAGVDIRCFVVGSKVVAAMKRSGAEGDFRSNLHLGGSAVSVRITKEERATAIR
AARCFGLGVAGVDLLRSETGPKVLEVNSSPGLEGIEKTSKKDIAALIHDEIEANVRPTPLRTRKALGDAAE
>Mature_470_residues
STDDPNQNLRLGWEEWVRLPELGLPALRAKVDTGARTSALHATDIETFGPAKAPKVRFTVHPIPGRDDLLIPCSAAIKDR
REVTSSNGDREMRYVIETNLEIGGQVWPVEVTLTDRRGMALHMLLGRQALTENISVVPSERYCQPELDYSVYATPAIRKK
APNRALRIAVLSREDNYSTRRLVEEGERRGHSVEVIDTTRCYMSINALAPEIHYDGKRLPRYDAVIPRIGASVTQYGTAL
LRQFETLGTYCVNGSDGITASRDKLHAHQMLARHKIGMPATAFAASPKDTNALIDIVGGAPLIVKLLESTQGKGVVLAET
KKAAESVITAFRGLKANFLVQQFVKEAAGVDIRCFVVGSKVVAAMKRSGAEGDFRSNLHLGGSAVSVRITKEERATAIRA
ARCFGLGVAGVDLLRSETGPKVLEVNSSPGLEGIEKTSKKDIAALIHDEIEANVRPTPLRTRKALGDAAE

Specific function: Responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6 [H]

COG id: COG0189

COG function: function code HJ; Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain [H]

Homologues:

Organism=Homo sapiens, GI164663810, Length=231, Percent_Identity=31.1688311688312, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI134254462, Length=227, Percent_Identity=30.8370044052863, Blast_Score=87, Evalue=5e-17,
Organism=Escherichia coli, GI1787076, Length=279, Percent_Identity=60.9318996415771, Blast_Score=338, Evalue=3e-94,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011761
- InterPro:   IPR013651
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR008503
- InterPro:   IPR009007
- InterPro:   IPR004666 [H]

Pfam domain/function: PF05618 DUF785; PF08443 RimK [H]

EC number: NA

Molecular weight: Translated: 51316; Mature: 51185

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTDDPNQNLRLGWEEWVRLPELGLPALRAKVDTGARTSALHATDIETFGPAKAPKVRFT
CCCCCCCCCCEECHHHHHCCCCCCCHHHHHCCCCCCCCCEEEECCCCCCCCCCCCEEEEE
VHPIPGRDDLLIPCSAAIKDRREVTSSNGDREMRYVIETNLEIGGQVWPVEVTLTDRRGM
EECCCCCCCEEEECHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEEEEEEECCCCC
ALHMLLGRQALTENISVVPSERYCQPELDYSVYATPAIRKKAPNRALRIAVLSREDNYST
EEEEHHHHHHHHCCCEECCCCCCCCCCCCCEEEECCHHHHCCCCCEEEEEEEECCCCCHH
RRLVEEGERRGHSVEVIDTTRCYMSINALAPEIHYDGKRLPRYDAVIPRIGASVTQYGTA
HHHHHHHHHCCCEEEEEECCEEEEEECCCCCCEECCCCCCCCHHHHHHHHCCHHHHHHHH
LLRQFETLGTYCVNGSDGITASRDKLHAHQMLARHKIGMPATAFAASPKDTNALIDIVGG
HHHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCHHEECCCCCCCEEEEECCC
APLIVKLLESTQGKGVVLAETKKAAESVITAFRGLKANFLVQQFVKEAAGVDIRCFVVGS
CHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECH
KVVAAMKRSGAEGDFRSNLHLGGSAVSVRITKEERATAIRAARCFGLGVAGVDLLRSETG
HHHHHHHHCCCCCCCCCCEEECCCEEEEEEECHHHHHHHHHHHHHHCCHHHHHHHHCCCC
PKVLEVNSSPGLEGIEKTSKKDIAALIHDEIEANVRPTPLRTRKALGDAAE
CEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCC
>Mature Secondary Structure 
STDDPNQNLRLGWEEWVRLPELGLPALRAKVDTGARTSALHATDIETFGPAKAPKVRFT
CCCCCCCCCEECHHHHHCCCCCCCHHHHHCCCCCCCCCEEEECCCCCCCCCCCCEEEEE
VHPIPGRDDLLIPCSAAIKDRREVTSSNGDREMRYVIETNLEIGGQVWPVEVTLTDRRGM
EECCCCCCCEEEECHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEEEEEEECCCCC
ALHMLLGRQALTENISVVPSERYCQPELDYSVYATPAIRKKAPNRALRIAVLSREDNYST
EEEEHHHHHHHHCCCEECCCCCCCCCCCCCEEEECCHHHHCCCCCEEEEEEEECCCCCHH
RRLVEEGERRGHSVEVIDTTRCYMSINALAPEIHYDGKRLPRYDAVIPRIGASVTQYGTA
HHHHHHHHHCCCEEEEEECCEEEEEECCCCCCEECCCCCCCCHHHHHHHHCCHHHHHHHH
LLRQFETLGTYCVNGSDGITASRDKLHAHQMLARHKIGMPATAFAASPKDTNALIDIVGG
HHHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCHHEECCCCCCCEEEEECCC
APLIVKLLESTQGKGVVLAETKKAAESVITAFRGLKANFLVQQFVKEAAGVDIRCFVVGS
CHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECH
KVVAAMKRSGAEGDFRSNLHLGGSAVSVRITKEERATAIRAARCFGLGVAGVDLLRSETG
HHHHHHHHCCCCCCCCCCEEECCCEEEEEEECHHHHHHHHHHHHHHCCHHHHHHHHCCCC
PKVLEVNSSPGLEGIEKTSKKDIAALIHDEIEANVRPTPLRTRKALGDAAE
CEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Glu; Ribosomal protein S6 [C]

Specific reaction: Catalyzes the addition of glutamic acids to the carboxyl end of ribosomal protein S6 [C]

General reaction: Ligases; Forming Carbon-Nitrogen Bonds; Acid-D-Amino-Acid Ligases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA