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The map label for this gene is rsmC [H]

Identifier: 94985722

GI number: 94985722

Start: 1724394

End: 1725617

Strand: Reverse

Name: rsmC [H]

Synonym: Dgeo_1622

Alternate gene names: 94985722

Gene position: 1725617-1724394 (Counterclockwise)

Preceding gene: 94985728

Following gene: 94985719

Centisome position: 69.94

GC content: 71.41

Gene sequence:

>1224_bases
GTGACTGGCAGGGGCAAGCAGAAGATCAGAGTGAGTCGTTCGGCGTCCAGTCGTCCGGCACCCGGCAAACGCACCGAGGG
GTCCGGCGCGGCGGCCGGAAGGTATTTCGAGGTGCGGCCCGCTCGGCTTGGGCCACGACTGGAAGGCCTCTACGCCCTCA
CCAAGCCCGGCGTGCGCGGGTTCCCGGAAGTGGACCCCGCCCAGGCCCTCCTCGCGTGGCTGATGCGCAAAGACCGCGTC
AGGGGCGAGGTGCTCGACCTCAGCGCGCTGGGTGGCCTGCTCGCCAGCCTCCCCGGCGTGACGCTGCGCGCGGTGGAAGG
TTCGGCGGCGGCTCTGACCGTGCTGGCGCGGGCTGGCCTGGATGCCTTTGCCGCTGCGCCGGGCGACGACCTGAGCGCAC
GCTGGCCCGAGCGGGCACGCACGGTCGCGCTGGTGCTGGCCGGAGACCGGGGGAATGCCTATGCACTCTCGCAGGTGGCT
TGGGCCCACGCCTGCACCCCGCCCGGCGGCACGCTTTACCTCGCCGGGGACCGCGACAAGGGCTTTGACCGCTACGTGCG
CGCCGCCGCGAGGGCGTTTGGCACAGGGGAGACGATCGCCCGGGACGGCGGCATGCGCGTCGCAAAACTGGTTCGCCGCC
CCGGTCCTACCCCGGCGTACCCGGACCCCGAAGGCTATGAGGCATTCGGCGTGAAGGTGGTGGGTCTGCCCGGGGTCTTC
AGCGCGGCGAAGCCCGATAAGGCCACCACGCTGCTGCTGGGCACCCTAGAAGCCCTGGACCTGACTGAGCTGGACCTGAC
CGGAAAGCGCGTGCTGGACCTGGGTTGCGGCACCGGCCTCATGGGCGCCTGGGCCGCTCGCCGGGGCGCACAGGTCACGC
TGGTGGACGGTGACCTCCAGAGCGTCCGCTCGGCGCAGGCCACTCTAGCGGCGAACGGCCTCTCTGGCGACGTGTTCCTG
AGTGATGTGGACGCGGCGCTGGGCGAGCGTACCTTTGACGTGATCCTCACCAACCCGCCCTTTCACGTGGGGCGGGGCGT
GGTGCTCGACGTGGCACGGGAGTTCATCGCAGCGGCCGGGCGCCGCCTGAATCCCGGCGGAACGCTCTATCTCGTCGCCA
ATGAACCGCTGCCCTACGAGACCCCCCTGCGCTCCCTGGGTGAGCTGCGCGCGCTGCGGCGGGAAGGGGACTTCAAGGTG
CTGGCGGCCACGCGGGCGGGCTGA

Upstream 100 bases:

>100_bases
TCGAAGGCCCAGTCAGGGGACACGGCGGGGGTGACGGCAGCAGGCATAGGGGTAAGGTAGCAGCCGTTAGGGGTCCGCCA
CATGTGCCACTCTGTAGCCC

Downstream 100 bases:

>100_bases
GTCTCAGCGGGGCGGCCCTGCCTCCAGCACCTGCCGCACCCGTTCAGGCAGGGCGGCGCGGTCCTCACGCGTCAGCGGGC
GGCGGGGCTGGCGGTGCAAG

Product: rRNA (guanine-N(2)-)-methyltransferase

Products: NA

Alternate protein names: 16S rRNA m2G1207 methyltransferase; rRNA (guanine-N(2)-)-methyltransferase rsmC [H]

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MTGRGKQKIRVSRSASSRPAPGKRTEGSGAAAGRYFEVRPARLGPRLEGLYALTKPGVRGFPEVDPAQALLAWLMRKDRV
RGEVLDLSALGGLLASLPGVTLRAVEGSAAALTVLARAGLDAFAAAPGDDLSARWPERARTVALVLAGDRGNAYALSQVA
WAHACTPPGGTLYLAGDRDKGFDRYVRAAARAFGTGETIARDGGMRVAKLVRRPGPTPAYPDPEGYEAFGVKVVGLPGVF
SAAKPDKATTLLLGTLEALDLTELDLTGKRVLDLGCGTGLMGAWAARRGAQVTLVDGDLQSVRSAQATLAANGLSGDVFL
SDVDAALGERTFDVILTNPPFHVGRGVVLDVAREFIAAAGRRLNPGGTLYLVANEPLPYETPLRSLGELRALRREGDFKV
LAATRAG

Sequences:

>Translated_407_residues
MTGRGKQKIRVSRSASSRPAPGKRTEGSGAAAGRYFEVRPARLGPRLEGLYALTKPGVRGFPEVDPAQALLAWLMRKDRV
RGEVLDLSALGGLLASLPGVTLRAVEGSAAALTVLARAGLDAFAAAPGDDLSARWPERARTVALVLAGDRGNAYALSQVA
WAHACTPPGGTLYLAGDRDKGFDRYVRAAARAFGTGETIARDGGMRVAKLVRRPGPTPAYPDPEGYEAFGVKVVGLPGVF
SAAKPDKATTLLLGTLEALDLTELDLTGKRVLDLGCGTGLMGAWAARRGAQVTLVDGDLQSVRSAQATLAANGLSGDVFL
SDVDAALGERTFDVILTNPPFHVGRGVVLDVAREFIAAAGRRLNPGGTLYLVANEPLPYETPLRSLGELRALRREGDFKV
LAATRAG
>Mature_406_residues
TGRGKQKIRVSRSASSRPAPGKRTEGSGAAAGRYFEVRPARLGPRLEGLYALTKPGVRGFPEVDPAQALLAWLMRKDRVR
GEVLDLSALGGLLASLPGVTLRAVEGSAAALTVLARAGLDAFAAAPGDDLSARWPERARTVALVLAGDRGNAYALSQVAW
AHACTPPGGTLYLAGDRDKGFDRYVRAAARAFGTGETIARDGGMRVAKLVRRPGPTPAYPDPEGYEAFGVKVVGLPGVFS
AAKPDKATTLLLGTLEALDLTELDLTGKRVLDLGCGTGLMGAWAARRGAQVTLVDGDLQSVRSAQATLAANGLSGDVFLS
DVDAALGERTFDVILTNPPFHVGRGVVLDVAREFIAAAGRRLNPGGTLYLVANEPLPYETPLRSLGELRALRREGDFKVL
AATRAG

Specific function: Specifically methylates the guanosine in position 1207 of 16S rRNA in the 30S particle [H]

COG id: COG2813

COG function: function code J; 16S RNA G1207 methylase RsmC

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmC family [H]

Homologues:

Organism=Escherichia coli, GI1790830, Length=245, Percent_Identity=35.9183673469388, Blast_Score=112, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR013675
- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS; PF08468 MTS_N [H]

EC number: =2.1.1.172 [H]

Molecular weight: Translated: 42628; Mature: 42497

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGRGKQKIRVSRSASSRPAPGKRTEGSGAAAGRYFEVRPARLGPRLEGLYALTKPGVRG
CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECHHHCCCCHHCEEEECCCCCCC
FPEVDPAQALLAWLMRKDRVRGEVLDLSALGGLLASLPGVTLRAVEGSAAALTVLARAGL
CCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCC
DAFAAAPGDDLSARWPERARTVALVLAGDRGNAYALSQVAWAHACTPPGGTLYLAGDRDK
HHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEHHHHHHHHCCCCCCCEEEEECCCCC
GFDRYVRAAARAFGTGETIARDGGMRVAKLVRRPGPTPAYPDPEGYEAFGVKVVGLPGVF
CHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHCCCCCCCCCCCCCCEEECEEEEECCCCC
SAAKPDKATTLLLGTLEALDLTELDLTGKRVLDLGCGTGLMGAWAARRGAQVTLVDGDLQ
CCCCCCCCEEEEEEHHHHCCCEEECCCCCEEEEECCCCCHHHHHHHCCCCEEEEECCCHH
SVRSAQATLAANGLSGDVFLSDVDAALGERTFDVILTNPPFHVGRGVVLDVAREFIAAAG
HHHHHHHHHEECCCCCCEEEEHHHHHHCCCEEEEEECCCCCHHCCHHHHHHHHHHHHHCC
RRLNPGGTLYLVANEPLPYETPLRSLGELRALRREGDFKVLAATRAG
CEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCC
>Mature Secondary Structure 
TGRGKQKIRVSRSASSRPAPGKRTEGSGAAAGRYFEVRPARLGPRLEGLYALTKPGVRG
CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECHHHCCCCHHCEEEECCCCCCC
FPEVDPAQALLAWLMRKDRVRGEVLDLSALGGLLASLPGVTLRAVEGSAAALTVLARAGL
CCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCC
DAFAAAPGDDLSARWPERARTVALVLAGDRGNAYALSQVAWAHACTPPGGTLYLAGDRDK
HHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEHHHHHHHHCCCCCCCEEEEECCCCC
GFDRYVRAAARAFGTGETIARDGGMRVAKLVRRPGPTPAYPDPEGYEAFGVKVVGLPGVF
CHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHCCCCCCCCCCCCCCEEECEEEEECCCCC
SAAKPDKATTLLLGTLEALDLTELDLTGKRVLDLGCGTGLMGAWAARRGAQVTLVDGDLQ
CCCCCCCCEEEEEEHHHHCCCEEECCCCCEEEEECCCCCHHHHHHHCCCCEEEEECCCHH
SVRSAQATLAANGLSGDVFLSDVDAALGERTFDVILTNPPFHVGRGVVLDVAREFIAAAG
HHHHHHHHHEECCCCCCEEEEHHHHHHCCCEEEEEECCCCCHHCCHHHHHHHHHHHHHCC
RRLNPGGTLYLVANEPLPYETPLRSLGELRALRREGDFKVLAATRAG
CEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA