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The map label for this gene is ydjA [H]

Identifier: 94985728

GI number: 94985728

Start: 1731855

End: 1732478

Strand: Reverse

Name: ydjA [H]

Synonym: Dgeo_1628

Alternate gene names: 94985728

Gene position: 1732478-1731855 (Counterclockwise)

Preceding gene: 94985737

Following gene: 94985722

Centisome position: 70.22

GC content: 67.95

Gene sequence:

>624_bases
GTGGGAAATGTGGGAAAGACTGCCTTGCCGGCACCGCTTGACCTCCTCACGGCGGTTCGCGAACGCCGCACCGTGGACCT
GAAGGCGCTCAAACCCGATCCGATTCCCAGGGAGGTGCTGCTGACGCTGCTGGAAGCCGCCAATTGGGCCCCCAGCCACG
GGCGCACCGAACCTTGGCGTTTCGTGGTGTTTACGGGAGAGGGTCGCCGGCAGCTGGCCGACACGCTCGCCATGTCGTTG
GCTCGGCTGAAGGGGGCCGCGCAGCCCGACCCCGAAGTCCAGCGTGCTCAGCGTGAACGGCAGAACCTCGCGCCGGTCTG
GATCGCCGTTGCAGCCGAACCCGCCGAGCAACCCCGGATGCCGCTGCACGAGGAGCAGTGGGCGGTGGCCTGCGCGGTGC
AGACCCTGATGCTCACGGCCCGCGCGCTGGGCATTGCCAGCAAGTGGATCACCAACGCGGCCAGCTTGCATCCGCACACC
CGCGAGGCGCTCGGGTTCGGGGAGCAGGTCAGCATGATGGGCCTGGTGTATCTGGGCTATCCGCAGGGCGAGTGGCCTGT
CGGGGAACGCCGCTCCATCGAGGACAAGGTGCGCTGGGTGGAGACGGCAGGCGAGCAGGATTAA

Upstream 100 bases:

>100_bases
TGTAACTGCCGTCAGGACTTGTCATGCTGCCGAGTACGGAGACAGCCGAGGAAAGGTTCCCGCGCTGCCGCTTTGGCCTA
CCCTGAGGGACATGAATCTT

Downstream 100 bases:

>100_bases
CCCGCGGAGCTGACCCCATCCTGTGGGAGTCCTGTTGGCGTGCGTGGGCAAGCTCCTGCCCACGCTGCTCAGACCTTCAG
GCCCCCACCACCGCGCCGAT

Product: nitroreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MGNVGKTALPAPLDLLTAVRERRTVDLKALKPDPIPREVLLTLLEAANWAPSHGRTEPWRFVVFTGEGRRQLADTLAMSL
ARLKGAAQPDPEVQRAQRERQNLAPVWIAVAAEPAEQPRMPLHEEQWAVACAVQTLMLTARALGIASKWITNAASLHPHT
REALGFGEQVSMMGLVYLGYPQGEWPVGERRSIEDKVRWVETAGEQD

Sequences:

>Translated_207_residues
MGNVGKTALPAPLDLLTAVRERRTVDLKALKPDPIPREVLLTLLEAANWAPSHGRTEPWRFVVFTGEGRRQLADTLAMSL
ARLKGAAQPDPEVQRAQRERQNLAPVWIAVAAEPAEQPRMPLHEEQWAVACAVQTLMLTARALGIASKWITNAASLHPHT
REALGFGEQVSMMGLVYLGYPQGEWPVGERRSIEDKVRWVETAGEQD
>Mature_206_residues
GNVGKTALPAPLDLLTAVRERRTVDLKALKPDPIPREVLLTLLEAANWAPSHGRTEPWRFVVFTGEGRRQLADTLAMSLA
RLKGAAQPDPEVQRAQRERQNLAPVWIAVAAEPAEQPRMPLHEEQWAVACAVQTLMLTARALGIASKWITNAASLHPHTR
EALGFGEQVSMMGLVYLGYPQGEWPVGERRSIEDKVRWVETAGEQD

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

Organism=Escherichia coli, GI1788063, Length=171, Percent_Identity=32.7485380116959, Blast_Score=81, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 22938; Mature: 22806

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNVGKTALPAPLDLLTAVRERRTVDLKALKPDPIPREVLLTLLEAANWAPSHGRTEPWR
CCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEE
FVVFTGEGRRQLADTLAMSLARLKGAAQPDPEVQRAQRERQNLAPVWIAVAAEPAEQPRM
EEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCC
PLHEEQWAVACAVQTLMLTARALGIASKWITNAASLHPHTREALGFGEQVSMMGLVYLGY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHEEEEECC
PQGEWPVGERRSIEDKVRWVETAGEQD
CCCCCCCCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GNVGKTALPAPLDLLTAVRERRTVDLKALKPDPIPREVLLTLLEAANWAPSHGRTEPWR
CCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEE
FVVFTGEGRRQLADTLAMSLARLKGAAQPDPEVQRAQRERQNLAPVWIAVAAEPAEQPRM
EEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCC
PLHEEQWAVACAVQTLMLTARALGIASKWITNAASLHPHTREALGFGEQVSMMGLVYLGY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHEEEEECC
PQGEWPVGERRSIEDKVRWVETAGEQD
CCCCCCCCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]