Definition | Deinococcus geothermalis DSM 11300, complete genome. |
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Accession | NC_008025 |
Length | 2,467,205 |
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The map label for this gene is 94985719
Identifier: 94985719
GI number: 94985719
Start: 1721507
End: 1722295
Strand: Reverse
Name: 94985719
Synonym: Dgeo_1619
Alternate gene names: NA
Gene position: 1722295-1721507 (Counterclockwise)
Preceding gene: 94985722
Following gene: 94985717
Centisome position: 69.81
GC content: 68.57
Gene sequence:
>789_bases ATGACCCCTCGCCGTGACTGCCTCCTGATCCTCGCGCCGCACGCGTCCGGAGCGCTGCCCGCCGATGTGCTGCGCGAGAT GTTGGGGGAGGATGCCTTTGATCTGAACAAGCGGGCGGCCTTCCTCACACGGCTTTTCCAGGAGGGCGACCCCTACACCG ATCTGATCTACGCGGTGCCTGGCGCGCGTTACCTGGAAGCGCCCTGGAGCCGCTTTGCCGCTGACCTCAACCGCGAGTGC AACGACCACACGGACAACGGTGTGCTCAAACTCACTGACTTCGCGCGGCGACCGCTTTATCCGGCGGGCTTTACCCTGAC GCCCGAGCGCCGCGAAGGCCGGCTGCGGCGTATCTGGGATGCTTTCGACGCGCAGGTGGGGGTGGAGCTGGAGGGTGTGG CGCTCATGATTGTGGGGCACAGCATGGCCTCGCGCGGCCCAGCCCTGGGGCCAGACACCGGCAAGCTGCGCCCCGCCCTG ACGCTGATGCTCGGGACGGAGCGTGCGCCCACCTTCCCCCCTGACCGCTGGGAGGCGCTGCAAGCCGCTTGCGCCGAAGC CTTTGCGCCGGTCCTCAGCGGTGACCTCACGCGGGTGGCGGTGGGTGACCCCTGGACCACCGATCCTCTCAGCGCTCGCT GGCATGCCCGCACCGGTGTGCCCGCCTTTGGACTGGAGATCAACGTGGCCCTCTATCTCACCGAGGAAGGGGAGCCACGG CCGAACGCCATCCGCGCCCTGGCCCGCGCTTTCGAGCACTTCGCGGACGCGGCGCTGGAACTGGTGTAG
Upstream 100 bases:
>100_bases TCTACCGGTGGGGGTGAGGAGCGGGGGTGCTTGGGCCGCAGTTGGCGACCCCGGGTTTTTCCTGCGCACCTCTGCCCGCC TCGCGCGTACCATCCTTCCC
Downstream 100 bases:
>100_bases GGGGAAGCGGGACCGTGCGCCGCCCCTACGCTTCGCGCGTCGCCAGCCCCCGCAACTGGGCCAGGAGTGCCCGCGCCGCC TGCGGGTCGGGTGCGTTCTC
Product: N-formylglutamate amidohydrolase
Products: NA
Alternate protein names: Glutamine Synthetase Catalytic Region
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MTPRRDCLLILAPHASGALPADVLREMLGEDAFDLNKRAAFLTRLFQEGDPYTDLIYAVPGARYLEAPWSRFAADLNREC NDHTDNGVLKLTDFARRPLYPAGFTLTPERREGRLRRIWDAFDAQVGVELEGVALMIVGHSMASRGPALGPDTGKLRPAL TLMLGTERAPTFPPDRWEALQAACAEAFAPVLSGDLTRVAVGDPWTTDPLSARWHARTGVPAFGLEINVALYLTEEGEPR PNAIRALARAFEHFADAALELV
Sequences:
>Translated_262_residues MTPRRDCLLILAPHASGALPADVLREMLGEDAFDLNKRAAFLTRLFQEGDPYTDLIYAVPGARYLEAPWSRFAADLNREC NDHTDNGVLKLTDFARRPLYPAGFTLTPERREGRLRRIWDAFDAQVGVELEGVALMIVGHSMASRGPALGPDTGKLRPAL TLMLGTERAPTFPPDRWEALQAACAEAFAPVLSGDLTRVAVGDPWTTDPLSARWHARTGVPAFGLEINVALYLTEEGEPR PNAIRALARAFEHFADAALELV >Mature_261_residues TPRRDCLLILAPHASGALPADVLREMLGEDAFDLNKRAAFLTRLFQEGDPYTDLIYAVPGARYLEAPWSRFAADLNRECN DHTDNGVLKLTDFARRPLYPAGFTLTPERREGRLRRIWDAFDAQVGVELEGVALMIVGHSMASRGPALGPDTGKLRPALT LMLGTERAPTFPPDRWEALQAACAEAFAPVLSGDLTRVAVGDPWTTDPLSARWHARTGVPAFGLEINVALYLTEEGEPRP NAIRALARAFEHFADAALELV
Specific function: Unknown
COG id: COG3741
COG function: function code E; N-formylglutamate amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28787; Mature: 28656
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPRRDCLLILAPHASGALPADVLREMLGEDAFDLNKRAAFLTRLFQEGDPYTDLIYAVP CCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHEEEECC GARYLEAPWSRFAADLNRECNDHTDNGVLKLTDFARRPLYPAGFTLTPERREGRLRRIWD CCHHHHCHHHHHHHHHCCCCCCCCCCCEEEEEHHHHCCCCCCCCEECCHHHCCHHHHHHH AFDAQVGVELEGVALMIVGHSMASRGPALGPDTGKLRPALTLMLGTERAPTFPPDRWEAL HHCCCCCCEECCEEEEEEECHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHH QAACAEAFAPVLSGDLTRVAVGDPWTTDPLSARWHARTGVPAFGLEINVALYLTEEGEPR HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEECCCCCCEECEEEEEEEEEECCCCCC PNAIRALARAFEHFADAALELV HHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TPRRDCLLILAPHASGALPADVLREMLGEDAFDLNKRAAFLTRLFQEGDPYTDLIYAVP CCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHEEEECC GARYLEAPWSRFAADLNRECNDHTDNGVLKLTDFARRPLYPAGFTLTPERREGRLRRIWD CCHHHHCHHHHHHHHHCCCCCCCCCCCEEEEEHHHHCCCCCCCCEECCHHHCCHHHHHHH AFDAQVGVELEGVALMIVGHSMASRGPALGPDTGKLRPALTLMLGTERAPTFPPDRWEAL HHCCCCCCEECCEEEEEEECHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHH QAACAEAFAPVLSGDLTRVAVGDPWTTDPLSARWHARTGVPAFGLEINVALYLTEEGEPR HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEECCCCCCEECEEEEEEEEEECCCCCC PNAIRALARAFEHFADAALELV HHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA