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The map label for this gene is yoaR [H]

Identifier: 94985693

GI number: 94985693

Start: 1692175

End: 1693872

Strand: Reverse

Name: yoaR [H]

Synonym: Dgeo_1593

Alternate gene names: 94985693

Gene position: 1693872-1692175 (Counterclockwise)

Preceding gene: 94985694

Following gene: 94985687

Centisome position: 68.66

GC content: 67.2

Gene sequence:

>1698_bases
ATGAAGTTCTGGGTCACAGGTCTGTCTGCCGCCGTCTTGCTGGGCGGCGCACTTGCGATGGGGGTAGCCGCGCAGGATGA
CGGCAAGCTTGCTCCGGGGTTCCACGTGGCGGGTGTGGACCTGAGCGGTTTGACCCGCGAGGAGGCGCTCGCAGCCCTGC
AAGCCCATCTTCCAGCGCCGCCGCAGGTCACCGTCACGGCGGGGCCGCACGCCTGGACGGTGAGCGCCGACACGCTGGGC
TGGCGGGCCGATCCCCAGGCCAGCGTCGATGCCGCTTTGCGCGCCAGTGCCGGGCGCAACCTGCTGGAGCGGGTGGAGGG
CCTGCTCGGCCAGGTCAGCGTCCAGGAGCTGCCGCTGGTGACGCGGGTGGATGTCGCGACCGCGCTGCAAACGCTCAAGA
CCCTCACCGGCGACCTGCAAGCCCAGCCAAAGGACGCGGCGGTCATCTTCGACAAGGCGGCGAAAAAGTACGCGGTGCAG
CCGGACAGCCCAGGTCGCCGCGTGAATGCTGCGGCGGCAGCCAACGCGTATGCCGCCAACCCCGATCTCACCACCCTGAC
GGTCCCGGTGACCGAGTGGAAGGCGGGGCTGACGGCAGAGGCGCTCCAGCCGCAGGTGGACCTGGGGAACCGCTTGATGC
GCCCGTTGACTGTGCAGCTGGAGGGCACTGGGCGCACCGGCACGCTGACCCCCCTGCAGGTGGCCAACCTGTATTGGGTG
CGTGAAGGCGGCATCGTTCCCGACGAGCAGACCCTCCGGACAACCTTTGGGCGCCTGACGGATATGGTGGATCAGCCCGC
ACAGAATGCCCGCTACGCCTTTGAGAACGGCAAGCCGGTGAAGGTGAAGGAGCGGGCGGGGCGCGTGACCGACCGGCAGG
CGGCGCTGGCCGCGTTCCGCAAGGCCGTGTTCGACCCTGCGGTGAAGACCGTGGTCTTTCCGAGCAAGGTCAGTCAGCCT
ACCCTGACGGTGGCGGCGTTGCCCGATCCCAAGAAGCTGGAGTTGATTGCCACCGGCACCAGCACCTACTTCGGGAGCAG
CCCCGAGCGGCGCACCAATGTTGCCAACGCGGCGGCCAAGATCAGCGGGGTGGTGGTGCCCGCTGGGGAAACCTTTAGCT
TCCTGCAGGCTCTCGGCGGCATCACGCCCGATAACGGCTTTGTCGGCGGGCTGATCATCAGCGGGGGCCGCACCGTGGAC
GGCTTGGGTGGCGGCGTCTGCCAGGTGTCTACCACCACCTTCCGCGCGTTGTACCAGGCCGGGCTGCCGGTGGTGGAGCG
CAATCAGCACTCCTACCGGGTGGGATACTACGAGCCGCAGGTGGGTTTTGAGGCCGCGGTGTACGACCCCGGCGTAGATC
TCAAGATGAAGAATGACACCGGCGCGCCGATTCTGATCAAGACGATCAACGACAATGCGAAAAGCCGCCTAGAAGTGCAG
GTATGGGGCATCAAACCCAAGCGCACCGTGACGGTCAGTCCTGCCGTGATCCTCTCGCGGACACCGCACCCGCCCGCCCA
GTATGTCGTTAACCCCAACCTGCCCGCCGGAGCGGTGCGGCAGGTGGACTGGGCGCAGGACGGGTACAGTCTCTATATCA
CCCGCACCATCCAAGACGCGCAGGGCATCCGCACCGACAAGGTGAGCACGGTCTACAAGCCCTGGCGCGCCGTCTACGAG
ATCGGTCCGCGCGGCTGA

Upstream 100 bases:

>100_bases
CCTGGGCGTGGGGAACGAGCGGCGCTAGGGAGCCGAGCGTGAGAGGCAAGTGTGCTCCGCGTTCACTTGCCAAGCCGCAA
AGCTCCCTACACTGCCAGGA

Downstream 100 bases:

>100_bases
TCTGGTGGTTGGTCACCACCAGTGGCCTTACTGCGGTTTGCGCAGGGCGGCGAAGATCAGGCCGAACAGAAGGCAGGTGA
TCACCACGGCCATCAGCGAC

Product: VanW

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 565; Mature: 565

Protein sequence:

>565_residues
MKFWVTGLSAAVLLGGALAMGVAAQDDGKLAPGFHVAGVDLSGLTREEALAALQAHLPAPPQVTVTAGPHAWTVSADTLG
WRADPQASVDAALRASAGRNLLERVEGLLGQVSVQELPLVTRVDVATALQTLKTLTGDLQAQPKDAAVIFDKAAKKYAVQ
PDSPGRRVNAAAAANAYAANPDLTTLTVPVTEWKAGLTAEALQPQVDLGNRLMRPLTVQLEGTGRTGTLTPLQVANLYWV
REGGIVPDEQTLRTTFGRLTDMVDQPAQNARYAFENGKPVKVKERAGRVTDRQAALAAFRKAVFDPAVKTVVFPSKVSQP
TLTVAALPDPKKLELIATGTSTYFGSSPERRTNVANAAAKISGVVVPAGETFSFLQALGGITPDNGFVGGLIISGGRTVD
GLGGGVCQVSTTTFRALYQAGLPVVERNQHSYRVGYYEPQVGFEAAVYDPGVDLKMKNDTGAPILIKTINDNAKSRLEVQ
VWGIKPKRTVTVSPAVILSRTPHPPAQYVVNPNLPAGAVRQVDWAQDGYSLYITRTIQDAQGIRTDKVSTVYKPWRAVYE
IGPRG

Sequences:

>Translated_565_residues
MKFWVTGLSAAVLLGGALAMGVAAQDDGKLAPGFHVAGVDLSGLTREEALAALQAHLPAPPQVTVTAGPHAWTVSADTLG
WRADPQASVDAALRASAGRNLLERVEGLLGQVSVQELPLVTRVDVATALQTLKTLTGDLQAQPKDAAVIFDKAAKKYAVQ
PDSPGRRVNAAAAANAYAANPDLTTLTVPVTEWKAGLTAEALQPQVDLGNRLMRPLTVQLEGTGRTGTLTPLQVANLYWV
REGGIVPDEQTLRTTFGRLTDMVDQPAQNARYAFENGKPVKVKERAGRVTDRQAALAAFRKAVFDPAVKTVVFPSKVSQP
TLTVAALPDPKKLELIATGTSTYFGSSPERRTNVANAAAKISGVVVPAGETFSFLQALGGITPDNGFVGGLIISGGRTVD
GLGGGVCQVSTTTFRALYQAGLPVVERNQHSYRVGYYEPQVGFEAAVYDPGVDLKMKNDTGAPILIKTINDNAKSRLEVQ
VWGIKPKRTVTVSPAVILSRTPHPPAQYVVNPNLPAGAVRQVDWAQDGYSLYITRTIQDAQGIRTDKVSTVYKPWRAVYE
IGPRG
>Mature_565_residues
MKFWVTGLSAAVLLGGALAMGVAAQDDGKLAPGFHVAGVDLSGLTREEALAALQAHLPAPPQVTVTAGPHAWTVSADTLG
WRADPQASVDAALRASAGRNLLERVEGLLGQVSVQELPLVTRVDVATALQTLKTLTGDLQAQPKDAAVIFDKAAKKYAVQ
PDSPGRRVNAAAAANAYAANPDLTTLTVPVTEWKAGLTAEALQPQVDLGNRLMRPLTVQLEGTGRTGTLTPLQVANLYWV
REGGIVPDEQTLRTTFGRLTDMVDQPAQNARYAFENGKPVKVKERAGRVTDRQAALAAFRKAVFDPAVKTVVFPSKVSQP
TLTVAALPDPKKLELIATGTSTYFGSSPERRTNVANAAAKISGVVVPAGETFSFLQALGGITPDNGFVGGLIISGGRTVD
GLGGGVCQVSTTTFRALYQAGLPVVERNQHSYRVGYYEPQVGFEAAVYDPGVDLKMKNDTGAPILIKTINDNAKSRLEVQ
VWGIKPKRTVTVSPAVILSRTPHPPAQYVVNPNLPAGAVRQVDWAQDGYSLYITRTIQDAQGIRTDKVSTVYKPWRAVYE
IGPRG

Specific function: Unknown

COG id: COG2720

COG function: function code V; Uncharacterized vancomycin resistance protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022029
- InterPro:   IPR007391 [H]

Pfam domain/function: PF12229 PG_binding_4; PF04294 VanW [H]

EC number: NA

Molecular weight: Translated: 59991; Mature: 59991

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFWVTGLSAAVLLGGALAMGVAAQDDGKLAPGFHVAGVDLSGLTREEALAALQAHLPAP
CEEEECHHHHHHHHHHHHHHCEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCC
PQVTVTAGPHAWTVSADTLGWRADPQASVDAALRASAGRNLLERVEGLLGQVSVQELPLV
CEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHCCCE
TRVDVATALQTLKTLTGDLQAQPKDAAVIFDKAAKKYAVQPDSPGRRVNAAAAANAYAAN
EEHHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHEECCCCCCCCEEEHHHHCCCEECC
PDLTTLTVPVTEWKAGLTAEALQPQVDLGNRLMRPLTVQLEGTGRTGTLTPLQVANLYWV
CCCEEEEEEHHHHCCCCCHHHCCCCHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEEEEE
REGGIVPDEQTLRTTFGRLTDMVDQPAQNARYAFENGKPVKVKERAGRVTDRQAALAAFR
ECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEHHHCCCCCHHHHHHHHHH
KAVFDPAVKTVVFPSKVSQPTLTVAALPDPKKLELIATGTSTYFGSSPERRTNVANAAAK
HHHHCCHHHEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHH
ISGVVVPAGETFSFLQALGGITPDNGFVGGLIISGGRTVDGLGGGVCQVSTTTFRALYQA
HCEEEEECCCHHHHHHHHCCCCCCCCEEEEEEEECCCEECCCCCCEEEEEHHHHHHHHHC
GLPVVERNQHSYRVGYYEPQVGFEAAVYDPGVDLKMKNDTGAPILIKTINDNAKSRLEVQ
CCCEEECCCCCEEEEEECCCCCCEEEEECCCCCEEECCCCCCEEEEEEECCCCCCEEEEE
VWGIKPKRTVTVSPAVILSRTPHPPAQYVVNPNLPAGAVRQVDWAQDGYSLYITRTIQDA
EEECCCCCEEEECCEEEEECCCCCCCCEEECCCCCCCHHEEEEECCCCEEEEEEEEECCC
QGIRTDKVSTVYKPWRAVYEIGPRG
CCCCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKFWVTGLSAAVLLGGALAMGVAAQDDGKLAPGFHVAGVDLSGLTREEALAALQAHLPAP
CEEEECHHHHHHHHHHHHHHCEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCC
PQVTVTAGPHAWTVSADTLGWRADPQASVDAALRASAGRNLLERVEGLLGQVSVQELPLV
CEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHCCCE
TRVDVATALQTLKTLTGDLQAQPKDAAVIFDKAAKKYAVQPDSPGRRVNAAAAANAYAAN
EEHHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHEECCCCCCCCEEEHHHHCCCEECC
PDLTTLTVPVTEWKAGLTAEALQPQVDLGNRLMRPLTVQLEGTGRTGTLTPLQVANLYWV
CCCEEEEEEHHHHCCCCCHHHCCCCHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEEEEE
REGGIVPDEQTLRTTFGRLTDMVDQPAQNARYAFENGKPVKVKERAGRVTDRQAALAAFR
ECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEHHHCCCCCHHHHHHHHHH
KAVFDPAVKTVVFPSKVSQPTLTVAALPDPKKLELIATGTSTYFGSSPERRTNVANAAAK
HHHHCCHHHEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHH
ISGVVVPAGETFSFLQALGGITPDNGFVGGLIISGGRTVDGLGGGVCQVSTTTFRALYQA
HCEEEEECCCHHHHHHHHCCCCCCCCEEEEEEEECCCEECCCCCCEEEEEHHHHHHHHHC
GLPVVERNQHSYRVGYYEPQVGFEAAVYDPGVDLKMKNDTGAPILIKTINDNAKSRLEVQ
CCCEEECCCCCEEEEEECCCCCCEEEEECCCCCEEECCCCCCEEEEEEECCCCCCEEEEE
VWGIKPKRTVTVSPAVILSRTPHPPAQYVVNPNLPAGAVRQVDWAQDGYSLYITRTIQDA
EEECCCCCEEEECCEEEEECCCCCCCCEEECCCCCCCHHEEEEECCCCEEEEEEEEECCC
QGIRTDKVSTVYKPWRAVYEIGPRG
CCCCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]