Definition Deinococcus geothermalis DSM 11300, complete genome.
Accession NC_008025
Length 2,467,205

Click here to switch to the map view.

The map label for this gene is 94985694

Identifier: 94985694

GI number: 94985694

Start: 1693945

End: 1695027

Strand: Reverse

Name: 94985694

Synonym: Dgeo_1594

Alternate gene names: NA

Gene position: 1695027-1693945 (Counterclockwise)

Preceding gene: 94985695

Following gene: 94985693

Centisome position: 68.7

GC content: 66.3

Gene sequence:

>1083_bases
ATGCAAGAAGCCGAGCAAAGCGGCGTGACGGAGGAACCCAAGTTCACGCTGAGTGTCTCGGACGGCAATGTGCGCGAGGT
GGAGGGACGCCGCCCGGAGGCGGAAGTCACGCCGCCCCTCCTTGAAGCTCGGCGGACAGTGGAATTCACCACGCCGCGCG
CCAAGCTGATCGAGGAAGCGCACCGCGCCATCCACGCCGATCTTGCCGAGTATCCGCGCGCGCTTGCGGCCTATGAGGCG
CTGCGCACGGACCCCGAGGCGCTGGCCTGCTGGGACATGGCGAACTACGTGACCATGCGCAAGCTGGGCTACAACGACCA
TGGGCGCGTGCACGCCTTTATCACGGGTGCGGCCAGCATGGCGATCACGGAGCTGCTGCTGGGGGCCGGGGTCCGGCCCG
ACATCATGGAAAGCGGCGTGGGCGATGCCGACGACGTCTTCCTGGCGGTGATTCTGGGTACCATGCTGCACGATATCGGC
AACCAGATTCACCGCGTCGCGCACGAGCAGTTCGGTGTGATGCTGGCCCTGCCGATCCTCGACCGCATTCTGGGGCCGCT
GTACCCCGATCCCTTCAAGCGCACCAAGGTGCGGTCTTTCATCCTGGGCGCGATCGACTGCCACGACCTCAACCCACCCC
CCCTGACCCTGGAGGGCGGCATCACGGCGGTTGCGGACGGCACCGACATCACCAAGGGGCGGGGCCGCAAAGCGTTCGCG
CTCGGCAGCGTGGATATCCACTCCATCAGTGCGCTCGCGGTGGATCAGGTGGTGATTGAGAAGGGCCGAGACAAGCCAGT
CCTGATCAGCGTGACCATGAACAACTCGGGCGGCATCTTTCAGGTGGAGGAGGTGCTGGCCCCCAAGGTGATCCGCACGC
CCATGAGCCGCTACGTGGACCTGCGCGCCACCACCCGCGAGGGGGGCGACGAGCAGATCCTGCGCCGTGTGCGGTTGGAG
GGCGATCACTTCGTGATGGACCTCGACGGCGGCGAGCGCGTGCAGGTGGAGGTGGCTGATTCCCAGAAACAGCTTGCCGA
AGCGGTGCTGGAGAACCTGGGCGTGGGGAACGAGCGGCGCTAG

Upstream 100 bases:

>100_bases
TTCGGGATGGCGGTGGCCACTCAGGATTTCCGTGAGGGCACCTCGGCGTTCCTCGCCAAGCGGCGCCCGGCGTTCAAGGG
TGAATGAGGGGGGGGACGCG

Downstream 100 bases:

>100_bases
GGAGCCGAGCGTGAGAGGCAAGTGTGCTCCGCGTTCACTTGCCAAGCCGCAAAGCTCCCTACACTGCCAGGAATGAAGTT
CTGGGTCACAGGTCTGTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MQEAEQSGVTEEPKFTLSVSDGNVREVEGRRPEAEVTPPLLEARRTVEFTTPRAKLIEEAHRAIHADLAEYPRALAAYEA
LRTDPEALACWDMANYVTMRKLGYNDHGRVHAFITGAASMAITELLLGAGVRPDIMESGVGDADDVFLAVILGTMLHDIG
NQIHRVAHEQFGVMLALPILDRILGPLYPDPFKRTKVRSFILGAIDCHDLNPPPLTLEGGITAVADGTDITKGRGRKAFA
LGSVDIHSISALAVDQVVIEKGRDKPVLISVTMNNSGGIFQVEEVLAPKVIRTPMSRYVDLRATTREGGDEQILRRVRLE
GDHFVMDLDGGERVQVEVADSQKQLAEAVLENLGVGNERR

Sequences:

>Translated_360_residues
MQEAEQSGVTEEPKFTLSVSDGNVREVEGRRPEAEVTPPLLEARRTVEFTTPRAKLIEEAHRAIHADLAEYPRALAAYEA
LRTDPEALACWDMANYVTMRKLGYNDHGRVHAFITGAASMAITELLLGAGVRPDIMESGVGDADDVFLAVILGTMLHDIG
NQIHRVAHEQFGVMLALPILDRILGPLYPDPFKRTKVRSFILGAIDCHDLNPPPLTLEGGITAVADGTDITKGRGRKAFA
LGSVDIHSISALAVDQVVIEKGRDKPVLISVTMNNSGGIFQVEEVLAPKVIRTPMSRYVDLRATTREGGDEQILRRVRLE
GDHFVMDLDGGERVQVEVADSQKQLAEAVLENLGVGNERR
>Mature_360_residues
MQEAEQSGVTEEPKFTLSVSDGNVREVEGRRPEAEVTPPLLEARRTVEFTTPRAKLIEEAHRAIHADLAEYPRALAAYEA
LRTDPEALACWDMANYVTMRKLGYNDHGRVHAFITGAASMAITELLLGAGVRPDIMESGVGDADDVFLAVILGTMLHDIG
NQIHRVAHEQFGVMLALPILDRILGPLYPDPFKRTKVRSFILGAIDCHDLNPPPLTLEGGITAVADGTDITKGRGRKAFA
LGSVDIHSISALAVDQVVIEKGRDKPVLISVTMNNSGGIFQVEEVLAPKVIRTPMSRYVDLRATTREGGDEQILRRVRLE
GDHFVMDLDGGERVQVEVADSQKQLAEAVLENLGVGNERR

Specific function: Unknown

COG id: COG3294

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39381; Mature: 39381

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEAEQSGVTEEPKFTLSVSDGNVREVEGRRPEAEVTPPLLEARRTVEFTTPRAKLIEEA
CCCCCCCCCCCCCCEEEEECCCCEEECCCCCCCCCCCCHHHHHHHHEEECCCHHHHHHHH
HRAIHADLAEYPRALAAYEALRTDPEALACWDMANYVTMRKLGYNDHGRVHAFITGAASM
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHH
AITELLLGAGVRPDIMESGVGDADDVFLAVILGTMLHDIGNQIHRVAHEQFGVMLALPIL
HHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
DRILGPLYPDPFKRTKVRSFILGAIDCHDLNPPPLTLEGGITAVADGTDITKGRGRKAFA
HHHHCCCCCCCHHHHHHHHHHHCCEECCCCCCCCEEECCCEEEEECCCCCCCCCCCEEEE
LGSVDIHSISALAVDQVVIEKGRDKPVLISVTMNNSGGIFQVEEVLAPKVIRTPMSRYVD
ECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEHHHHCCHHHHCHHHHHEE
LRATTREGGDEQILRRVRLEGDHFVMDLDGGERVQVEVADSQKQLAEAVLENLGVGNERR
EEECCCCCCHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MQEAEQSGVTEEPKFTLSVSDGNVREVEGRRPEAEVTPPLLEARRTVEFTTPRAKLIEEA
CCCCCCCCCCCCCCEEEEECCCCEEECCCCCCCCCCCCHHHHHHHHEEECCCHHHHHHHH
HRAIHADLAEYPRALAAYEALRTDPEALACWDMANYVTMRKLGYNDHGRVHAFITGAASM
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHH
AITELLLGAGVRPDIMESGVGDADDVFLAVILGTMLHDIGNQIHRVAHEQFGVMLALPIL
HHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
DRILGPLYPDPFKRTKVRSFILGAIDCHDLNPPPLTLEGGITAVADGTDITKGRGRKAFA
HHHHCCCCCCCHHHHHHHHHHHCCEECCCCCCCCEEECCCEEEEECCCCCCCCCCCEEEE
LGSVDIHSISALAVDQVVIEKGRDKPVLISVTMNNSGGIFQVEEVLAPKVIRTPMSRYVD
ECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEHHHHCCHHHHCHHHHHEE
LRATTREGGDEQILRRVRLEGDHFVMDLDGGERVQVEVADSQKQLAEAVLENLGVGNERR
EEECCCCCCHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]