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The map label for this gene is 94985640

Identifier: 94985640

GI number: 94985640

Start: 1631973

End: 1633103

Strand: Reverse

Name: 94985640

Synonym: Dgeo_1540

Alternate gene names: NA

Gene position: 1633103-1631973 (Counterclockwise)

Preceding gene: 94985646

Following gene: 94985636

Centisome position: 66.19

GC content: 68.52

Gene sequence:

>1131_bases
ATGCTTTTCGCGGGTTTGACTCTGGCAACCGCCGCTACCGCTGCTGCCCCCCTTCCCACCCTCGTGCAGACCGTCAACCA
CCCGAACGCCCGGTGGGCCGTCCATGTAGACCGACAACGCACCCTGGCCGTGGACGACGACGGCGCAGCCGCCGTGCTCC
TTCCCTGGCAAGGCCCGCCCCGCACCGTGAAGTTCCCCGGCAACAGCAAATTGCGTTCGCCGCTGGTCACGCCGGAAGGC
CGGGTGCTGGCCGTGCAACTGGACTTCAGAGCGTGTCAGGTGGTGGTCTGGGACGTGACGGCGGGAAGGGCCACCACGCC
CCTGAAGGGCGACTTCACGCGGTTGTTCGGCTGCGACCGGCCGGAAGGAACCGAGTTCATCTTCGACATCGGCTTCACAC
CTGATGGCCGCTTCCTGCTGACCGCCGACCAGACGGGCCTGCGCCGCTGGGATGCGCGGACGGGCAGGCTGCTGAGAGCC
GTTCCGGGAAAGTTCCTCAGCCAGCACGTCAGCCCGGATGGCCGCAGCGTAGCAACTGTCGGGGACCGATACCGGGTGGA
GCTGTGGGCTACCGACCTCTCGCGCCGCCTGAAAGCTCTGCCGCCACAGCCCAAGGACTGCCTGCGCGGGCCGGGTGCCT
GGTCCACCGGGATAACCTGGAGTGCCGACAGCACACGCCTCGCCTTTTCCTGCAACCGCGAGGTGCGGGTGTGGAACCTC
GCCGCTGGAGGCGTGCAGAGCCTGAAGCGGGGGGGCAAACACGAGTACCCCGACGCCCCGACCTTCAGCCCCGACGGACG
CTTCGTGGTAGCCGACGAGGACCAGTTCGGGGCCGGCGTCTGGGACGTGGGGAACGGCCAGCGGGTCGCGCAACTCCGCC
TGGACGCCCCGAACGCGCAGGTCACCGATGTGGAGTTCACGCCGGGAAATCTGCTGCTCGCCGCGTTGAGCGATGGCCGA
CTCGCCCGGCTGGACCTGAACAGGCCCGCACAGGTGCTGCCGCCGCTCCCCCTGTTTTCCAAAGGAGACAGATTCCTCTG
GCCCACCCTTGCCGTCAGTCGGGAGGGGGACCGCCTGGCCGTGGCTTCGGGCGACGGCAGGCTGAACATCTACGCGCTGC
CGGGGAAGTGA

Upstream 100 bases:

>100_bases
TCCTCCTCAAAGCTGCTCTTTGAGCGCATTGTAGCCGTCCCCTGCCCGCTGGAATCTTCAGGCACAGGTCACCCGGACAG
TTCAGGCTGGGAGGATGCGA

Downstream 100 bases:

>100_bases
ACCCTATCCGCCCCGCGCTGCCCGCTCCACCCGCGCCACCACGCGCTCCTGGCCGAGCACCTCCAGCAGCTCGAACATGC
CGGGGCTTTCGCTCGTCCCG

Product: WD-40 repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MLFAGLTLATAATAAAPLPTLVQTVNHPNARWAVHVDRQRTLAVDDDGAAAVLLPWQGPPRTVKFPGNSKLRSPLVTPEG
RVLAVQLDFRACQVVVWDVTAGRATTPLKGDFTRLFGCDRPEGTEFIFDIGFTPDGRFLLTADQTGLRRWDARTGRLLRA
VPGKFLSQHVSPDGRSVATVGDRYRVELWATDLSRRLKALPPQPKDCLRGPGAWSTGITWSADSTRLAFSCNREVRVWNL
AAGGVQSLKRGGKHEYPDAPTFSPDGRFVVADEDQFGAGVWDVGNGQRVAQLRLDAPNAQVTDVEFTPGNLLLAALSDGR
LARLDLNRPAQVLPPLPLFSKGDRFLWPTLAVSREGDRLAVASGDGRLNIYALPGK

Sequences:

>Translated_376_residues
MLFAGLTLATAATAAAPLPTLVQTVNHPNARWAVHVDRQRTLAVDDDGAAAVLLPWQGPPRTVKFPGNSKLRSPLVTPEG
RVLAVQLDFRACQVVVWDVTAGRATTPLKGDFTRLFGCDRPEGTEFIFDIGFTPDGRFLLTADQTGLRRWDARTGRLLRA
VPGKFLSQHVSPDGRSVATVGDRYRVELWATDLSRRLKALPPQPKDCLRGPGAWSTGITWSADSTRLAFSCNREVRVWNL
AAGGVQSLKRGGKHEYPDAPTFSPDGRFVVADEDQFGAGVWDVGNGQRVAQLRLDAPNAQVTDVEFTPGNLLLAALSDGR
LARLDLNRPAQVLPPLPLFSKGDRFLWPTLAVSREGDRLAVASGDGRLNIYALPGK
>Mature_376_residues
MLFAGLTLATAATAAAPLPTLVQTVNHPNARWAVHVDRQRTLAVDDDGAAAVLLPWQGPPRTVKFPGNSKLRSPLVTPEG
RVLAVQLDFRACQVVVWDVTAGRATTPLKGDFTRLFGCDRPEGTEFIFDIGFTPDGRFLLTADQTGLRRWDARTGRLLRA
VPGKFLSQHVSPDGRSVATVGDRYRVELWATDLSRRLKALPPQPKDCLRGPGAWSTGITWSADSTRLAFSCNREVRVWNL
AAGGVQSLKRGGKHEYPDAPTFSPDGRFVVADEDQFGAGVWDVGNGQRVAQLRLDAPNAQVTDVEFTPGNLLLAALSDGR
LARLDLNRPAQVLPPLPLFSKGDRFLWPTLAVSREGDRLAVASGDGRLNIYALPGK

Specific function: Unknown

COG id: COG2319

COG function: function code R; FOG: WD40 repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 15 WD repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000767
- InterPro:   IPR020472
- InterPro:   IPR002182
- InterPro:   IPR015943
- InterPro:   IPR001680
- InterPro:   IPR011046
- InterPro:   IPR019782
- InterPro:   IPR019775
- InterPro:   IPR017986
- InterPro:   IPR019781 [H]

Pfam domain/function: PF00931 NB-ARC; PF00400 WD40 [H]

EC number: NA

Molecular weight: Translated: 40841; Mature: 40841

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: PS50294 WD_REPEATS_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFAGLTLATAATAAAPLPTLVQTVNHPNARWAVHVDRQRTLAVDDDGAAAVLLPWQGPP
CEEECEEHHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCEEEEECCCCCEEEEEECCCCC
RTVKFPGNSKLRSPLVTPEGRVLAVQLDFRACQVVVWDVTAGRATTPLKGDFTRLFGCDR
CEEECCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEEECCCCCCCCCCCCCCEEECCCC
PEGTEFIFDIGFTPDGRFLLTADQTGLRRWDARTGRLLRAVPGKFLSQHVSPDGRSVATV
CCCCEEEEEECCCCCCCEEEEECCCCCHHHCCCCCHHHHHCCHHHHHHHCCCCCCEEEEE
GDRYRVELWATDLSRRLKALPPQPKDCLRGPGAWSTGITWSADSTRLAFSCNREVRVWNL
CCEEEEEEEECCHHHHHHCCCCCCHHHHCCCCCCCCCEEECCCCCEEEEEECCEEEEEEE
AAGGVQSLKRGGKHEYPDAPTFSPDGRFVVADEDQFGAGVWDVGNGQRVAQLRLDAPNAQ
CCCCHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEECCCCCEEEEEEECCCCCE
VTDVEFTPGNLLLAALSDGRLARLDLNRPAQVLPPLPLFSKGDRFLWPTLAVSREGDRLA
EEEEEECCCCEEEEEECCCCEEEEECCCCHHHCCCCCCCCCCCEEEEEEEEEECCCCEEE
VASGDGRLNIYALPGK
EECCCCEEEEEECCCC
>Mature Secondary Structure
MLFAGLTLATAATAAAPLPTLVQTVNHPNARWAVHVDRQRTLAVDDDGAAAVLLPWQGPP
CEEECEEHHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCEEEEECCCCCEEEEEECCCCC
RTVKFPGNSKLRSPLVTPEGRVLAVQLDFRACQVVVWDVTAGRATTPLKGDFTRLFGCDR
CEEECCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEEECCCCCCCCCCCCCCEEECCCC
PEGTEFIFDIGFTPDGRFLLTADQTGLRRWDARTGRLLRAVPGKFLSQHVSPDGRSVATV
CCCCEEEEEECCCCCCCEEEEECCCCCHHHCCCCCHHHHHCCHHHHHHHCCCCCCEEEEE
GDRYRVELWATDLSRRLKALPPQPKDCLRGPGAWSTGITWSADSTRLAFSCNREVRVWNL
CCEEEEEEEECCHHHHHHCCCCCCHHHHCCCCCCCCCEEECCCCCEEEEEECCEEEEEEE
AAGGVQSLKRGGKHEYPDAPTFSPDGRFVVADEDQFGAGVWDVGNGQRVAQLRLDAPNAQ
CCCCHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEECCCCCEEEEEEECCCCCE
VTDVEFTPGNLLLAALSDGRLARLDLNRPAQVLPPLPLFSKGDRFLWPTLAVSREGDRLA
EEEEEECCCCEEEEEECCCCEEEEECCCCHHHCCCCCCCCCCCEEEEEEEEEECCCCEEE
VASGDGRLNIYALPGK
EECCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]