| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94985636
Identifier: 94985636
GI number: 94985636
Start: 1625452
End: 1625808
Strand: Reverse
Name: 94985636
Synonym: Dgeo_1536
Alternate gene names: NA
Gene position: 1625808-1625452 (Counterclockwise)
Preceding gene: 94985640
Following gene: 94985635
Centisome position: 65.9
GC content: 64.71
Gene sequence:
>357_bases ATGACGGCTATGTGTCCTGAACTGTATGACCCGCGTATGGGCTACGATCCGAGCCGCAAGCTGACCGATGGCGACGTGCT GGACCGGATGCCGGAGGGTTGGTGGGGAGACGCGGGCAAGATCGGGCGCGACTTCGGGTTTGATACTTACCAGGCGGGAG TGGATTTTGTGGTGCGGGTGGCGGCGCTGGCCGAAGCGCGCGGCCACCATCCCGACATCCACCTCTATTACCGCAGGGTC CGGCTGACCTTCTTCACCTATGAGGCAGGCGGCGTGACCCAGCTTGACCTTGACGCCGCGCGGGCTGTGAATGCCCTCTG GGACGAGCTGAGCAGCACCGGAGGGACCGGCGCTTGA
Upstream 100 bases:
>100_bases GCCACGTCTTCACGGCCCACTCTCTGGCACTGAGGGGAAGCAAGGGCTTTGGCCTGCACCGCGTCCCACGCTCCCTTGCT CTGCGCGTGTCTCCCGTAGC
Downstream 100 bases:
>100_bases AGCGTGACCTGCCGGATCTCGACGCCCTGTGGAACACGCTGCCATCCCGGCGCCGCTACGAGATCACCGTCACTGCGCAG TTCGGTGACCTCGACGACCT
Product: transcriptional coactivator/pterin dehydratase
Products: NA
Alternate protein names: PHS 2; 4-alpha-hydroxy-tetrahydropterin dehydratase 2; Pterin carbinolamine dehydratase 2; PCD 2 [H]
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MTAMCPELYDPRMGYDPSRKLTDGDVLDRMPEGWWGDAGKIGRDFGFDTYQAGVDFVVRVAALAEARGHHPDIHLYYRRV RLTFFTYEAGGVTQLDLDAARAVNALWDELSSTGGTGA
Sequences:
>Translated_118_residues MTAMCPELYDPRMGYDPSRKLTDGDVLDRMPEGWWGDAGKIGRDFGFDTYQAGVDFVVRVAALAEARGHHPDIHLYYRRV RLTFFTYEAGGVTQLDLDAARAVNALWDELSSTGGTGA >Mature_117_residues TAMCPELYDPRMGYDPSRKLTDGDVLDRMPEGWWGDAGKIGRDFGFDTYQAGVDFVVRVAALAEARGHHPDIHLYYRRVR LTFFTYEAGGVTQLDLDAARAVNALWDELSSTGGTGA
Specific function: Unknown
COG id: COG2154
COG function: function code H; Pterin-4a-carbinolamine dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pterin-4-alpha-carbinolamine dehydratase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001533 [H]
Pfam domain/function: PF01329 Pterin_4a [H]
EC number: =4.2.1.96 [H]
Molecular weight: Translated: 13091; Mature: 12960
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAMCPELYDPRMGYDPSRKLTDGDVLDRMPEGWWGDAGKIGRDFGFDTYQAGVDFVVRV CCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH AALAEARGHHPDIHLYYRRVRLTFFTYEAGGVTQLDLDAARAVNALWDELSSTGGTGA HHHHHHCCCCCCEEEEEEEEEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TAMCPELYDPRMGYDPSRKLTDGDVLDRMPEGWWGDAGKIGRDFGFDTYQAGVDFVVRV CCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH AALAEARGHHPDIHLYYRRVRLTFFTYEAGGVTQLDLDAARAVNALWDELSSTGGTGA HHHHHHCCCCCCEEEEEEEEEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14621292 [H]