| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94985518
Identifier: 94985518
GI number: 94985518
Start: 1505378
End: 1506418
Strand: Reverse
Name: 94985518
Synonym: Dgeo_1418
Alternate gene names: NA
Gene position: 1506418-1505378 (Counterclockwise)
Preceding gene: 94985519
Following gene: 94985517
Centisome position: 61.06
GC content: 66.19
Gene sequence:
>1041_bases ATGCCCGCCATGCGGATTCGCCTGGACCCCTGGCCCGTGGATATCGAGGGCGGACAACTGAGCCTAGAGCGGTTCGAGGG TGAGCTGATCGACCTGGAGACGCCGCGCTGGGCCGCTCTTCCAGCCCGGCCCATTCCGCGGCGTCTGGGTACGGTCTATG TGGTGGACGGCAAACGGCGCATGGAGTCGCGCGTTTTTATCGAAGACGACCAGGGCGAGGTGGGCATGGGCGGTTTTGGC GCCTTTGTGGTCGGGGCGGTCGAACTCTGTCCACACGGCACCCGGCCCGCGCGGCTCACCGACGTGAAGGCACAGCGGCT CTTGGCCCACGCGCCTGGACTGCGGGTGGATCCCTGCCGCCTCTCGCCGCGTGACCCCCACACCGGGCAGCTCGAATACC AACCGGTCCCTGCCGACAGCGCCGAGCCGCTTGCGCCGCTGCACAAGCTGCAACAGACCATGCTGGCTGCCGAGCAACAG CTCTCGCACGGCCTGGCCACCGCGGTTCCCTTTGATGAGACGGACCCGCACGAGGCACTGACTGCGCTCACCTTGCAAGA CGGCACCTTGCGCTCTCAGAACCTGGGGGGCGCCGTGGTGGGGTATGTCAAGACCATGCAAACCCAGTATTTGCCGCCTG ACCGGGTGGGCCTGCTTTCCGAACTGAAGCCGGGTGAGCGGACCCCCATCATGCACATGCGCTACGCCAATGGTCGGTAC ACCCGCTTCATCTGGTATGTGCGGCTGTGCAAGGCGGCTTTCTATCAGCACCCCATGTCCGGCGTGATGCGCCTAGAAAT GTACGCACCCGACGAACCCGACTTCCTGCCTCCTATCGTGCGTGAGGTGGCCAACATCAGTGGCACGCTGCTGTGTCGAC TGGCCAGCCAGGCCCACAAGGATCCCCGCGCCCCCCAAAACCTGATTCCGACTGCCGCCCTCGAGCAGGCCATGACCCGC GCGATGGGGAGTGCCGACCTCGTGATTCGTCGCCTGCGTGCGCACCTGGCCCGCGAACTGGGCCAGCCGGTGAGCGCATG A
Upstream 100 bases:
>100_bases GGGCTGCGGGCGTTGGCAGGGTACGACGGGGTGTAGAGCGCGCCGTGGGTGAAGCGCTGTTTCACATTTTGCGCGCCACG TTCCGGCTGCGCCCTCTAGA
Downstream 100 bases:
>100_bases CGGGGCCAAGTGTGAGTAGGCCGGACGAGCGCATCGGCATGGTGCTGGGCACCGAGGACGCTACCCCGGTGACCTTTTGG TTCGCGGTCAGTCCTGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 346; Mature: 345
Protein sequence:
>346_residues MPAMRIRLDPWPVDIEGGQLSLERFEGELIDLETPRWAALPARPIPRRLGTVYVVDGKRRMESRVFIEDDQGEVGMGGFG AFVVGAVELCPHGTRPARLTDVKAQRLLAHAPGLRVDPCRLSPRDPHTGQLEYQPVPADSAEPLAPLHKLQQTMLAAEQQ LSHGLATAVPFDETDPHEALTALTLQDGTLRSQNLGGAVVGYVKTMQTQYLPPDRVGLLSELKPGERTPIMHMRYANGRY TRFIWYVRLCKAAFYQHPMSGVMRLEMYAPDEPDFLPPIVREVANISGTLLCRLASQAHKDPRAPQNLIPTAALEQAMTR AMGSADLVIRRLRAHLARELGQPVSA
Sequences:
>Translated_346_residues MPAMRIRLDPWPVDIEGGQLSLERFEGELIDLETPRWAALPARPIPRRLGTVYVVDGKRRMESRVFIEDDQGEVGMGGFG AFVVGAVELCPHGTRPARLTDVKAQRLLAHAPGLRVDPCRLSPRDPHTGQLEYQPVPADSAEPLAPLHKLQQTMLAAEQQ LSHGLATAVPFDETDPHEALTALTLQDGTLRSQNLGGAVVGYVKTMQTQYLPPDRVGLLSELKPGERTPIMHMRYANGRY TRFIWYVRLCKAAFYQHPMSGVMRLEMYAPDEPDFLPPIVREVANISGTLLCRLASQAHKDPRAPQNLIPTAALEQAMTR AMGSADLVIRRLRAHLARELGQPVSA >Mature_345_residues PAMRIRLDPWPVDIEGGQLSLERFEGELIDLETPRWAALPARPIPRRLGTVYVVDGKRRMESRVFIEDDQGEVGMGGFGA FVVGAVELCPHGTRPARLTDVKAQRLLAHAPGLRVDPCRLSPRDPHTGQLEYQPVPADSAEPLAPLHKLQQTMLAAEQQL SHGLATAVPFDETDPHEALTALTLQDGTLRSQNLGGAVVGYVKTMQTQYLPPDRVGLLSELKPGERTPIMHMRYANGRYT RFIWYVRLCKAAFYQHPMSGVMRLEMYAPDEPDFLPPIVREVANISGTLLCRLASQAHKDPRAPQNLIPTAALEQAMTRA MGSADLVIRRLRAHLARELGQPVSA
Specific function: Unknown
COG id: COG2380
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38333; Mature: 38202
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAMRIRLDPWPVDIEGGQLSLERFEGELIDLETPRWAALPARPIPRRLGTVYVVDGKRR CCCEEEEECCCCEECCCCEEEHHHHCCCEEECCCCCEECCCCCCCHHHCCEEEEECCHHH MESRVFIEDDQGEVGMGGFGAFVVGAVELCPHGTRPARLTDVKAQRLLAHAPGLRVDPCR HCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCC LSPRDPHTGQLEYQPVPADSAEPLAPLHKLQQTMLAAEQQLSHGLATAVPFDETDPHEAL CCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHH TALTLQDGTLRSQNLGGAVVGYVKTMQTQYLPPDRVGLLSELKPGERTPIMHMRYANGRY EEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEEECCCCH TRFIWYVRLCKAAFYQHPMSGVMRLEMYAPDEPDFLPPIVREVANISGTLLCRLASQAHK HHHHHHHHHHHHHHHHCCHHHEEEEEEECCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCC DPRAPQNLIPTAALEQAMTRAMGSADLVIRRLRAHLARELGQPVSA CCCCCHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PAMRIRLDPWPVDIEGGQLSLERFEGELIDLETPRWAALPARPIPRRLGTVYVVDGKRR CCEEEEECCCCEECCCCEEEHHHHCCCEEECCCCCEECCCCCCCHHHCCEEEEECCHHH MESRVFIEDDQGEVGMGGFGAFVVGAVELCPHGTRPARLTDVKAQRLLAHAPGLRVDPCR HCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCC LSPRDPHTGQLEYQPVPADSAEPLAPLHKLQQTMLAAEQQLSHGLATAVPFDETDPHEAL CCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHH TALTLQDGTLRSQNLGGAVVGYVKTMQTQYLPPDRVGLLSELKPGERTPIMHMRYANGRY EEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEEECCCCH TRFIWYVRLCKAAFYQHPMSGVMRLEMYAPDEPDFLPPIVREVANISGTLLCRLASQAHK HHHHHHHHHHHHHHHHCCHHHEEEEEEECCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCC DPRAPQNLIPTAALEQAMTRAMGSADLVIRRLRAHLARELGQPVSA CCCCCHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA