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The map label for this gene is ntcA [H]

Identifier: 94985519

GI number: 94985519

Start: 1506483

End: 1507109

Strand: Reverse

Name: ntcA [H]

Synonym: Dgeo_1419

Alternate gene names: 94985519

Gene position: 1507109-1506483 (Counterclockwise)

Preceding gene: 94985520

Following gene: 94985518

Centisome position: 61.09

GC content: 66.99

Gene sequence:

>627_bases
ATGACCCTGCACCTCCACCCACCGTCTCTGCCTGATTTTGGTCACCGTTCTCTCCGCCGAGGCGATACGCTCTATCACGT
GGGCGATCCCGCTTCCAGCTTGTACCGCCTAGAGAGCGGTCTGCTGCGGGCCGTGCGGCTGACGCCCCAGGGCCGGACCC
TGACGGTTCGGCACATTCGGCCGGGTGACATTTTTGGCGAGGAACTCCTGCATGGCGCGGTGCGCGGGCAGCAGGTCACC
GCCCTGACCGATGCCACCCTCACGCCGCTGCACCTCCAGCAGCTCGGCCTGCAGGAGTTGTGGGAGGTGACACGCAGCCT
GAGCGTACAGCTCCAGCGAATGATGAGTGACGGCGTGCACATCCAGGACGGCGACCTGCGCGAGCGCATCGCCCGCTATC
TGCTGAGCCTCGCGGACAGCAGCCTGGGTGGCGCGCACCGTGACGGCACGCGCTATGTGCGCGTCACCCATGAGCTGATT
GCGGAAGGCACCGGCGCTACCCGCGAGAGCGTCTCCAAGCTGATCGGTGAGCTGCGGGATGACGGCTTGCTCACGCCTGC
CTACCGCTGCCTGACCTTGACGGATGAGGCGGGGCTGCGGGCGTTGGCAGGGTACGACGGGGTGTAG

Upstream 100 bases:

>100_bases
ATGTTCTGCCGCGCTTTGGCCTTTCGCTCCGCTCGGGGAGATGGCGGCATCCCCCGCCAGCGCCTGAGGGATGTGTCCCT
CTGTCTTTGTCAGGAGTACC

Downstream 100 bases:

>100_bases
AGCGCGCCGTGGGTGAAGCGCTGTTTCACATTTTGCGCGCCACGTTCCGGCTGCGCCCTCTAGAATGCCCGCCATGCGGA
TTCGCCTGGACCCCTGGCCC

Product: Crp/FNR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MTLHLHPPSLPDFGHRSLRRGDTLYHVGDPASSLYRLESGLLRAVRLTPQGRTLTVRHIRPGDIFGEELLHGAVRGQQVT
ALTDATLTPLHLQQLGLQELWEVTRSLSVQLQRMMSDGVHIQDGDLRERIARYLLSLADSSLGGAHRDGTRYVRVTHELI
AEGTGATRESVSKLIGELRDDGLLTPAYRCLTLTDEAGLRALAGYDGV

Sequences:

>Translated_208_residues
MTLHLHPPSLPDFGHRSLRRGDTLYHVGDPASSLYRLESGLLRAVRLTPQGRTLTVRHIRPGDIFGEELLHGAVRGQQVT
ALTDATLTPLHLQQLGLQELWEVTRSLSVQLQRMMSDGVHIQDGDLRERIARYLLSLADSSLGGAHRDGTRYVRVTHELI
AEGTGATRESVSKLIGELRDDGLLTPAYRCLTLTDEAGLRALAGYDGV
>Mature_207_residues
TLHLHPPSLPDFGHRSLRRGDTLYHVGDPASSLYRLESGLLRAVRLTPQGRTLTVRHIRPGDIFGEELLHGAVRGQQVTA
LTDATLTPLHLQQLGLQELWEVTRSLSVQLQRMMSDGVHIQDGDLRERIARYLLSLADSSLGGAHRDGTRYVRVTHELIA
EGTGATRESVSKLIGELRDDGLLTPAYRCLTLTDEAGLRALAGYDGV

Specific function: Required for full expression of proteins subject to ammonium repression. Transcriptional activator of genes subject to nitrogen control [H]

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH crp-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018490
- InterPro:   IPR000595
- InterPro:   IPR001808
- InterPro:   IPR012318
- InterPro:   IPR014710
- InterPro:   IPR018335
- InterPro:   IPR022299
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00027 cNMP_binding; PF00325 Crp [H]

EC number: NA

Molecular weight: Translated: 22915; Mature: 22784

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLHLHPPSLPDFGHRSLRRGDTLYHVGDPASSLYRLESGLLRAVRLTPQGRTLTVRHIR
CEEECCCCCCCCCCHHHHHCCCCEEECCCCHHHHHHHHHHHHHHEEECCCCCEEEEEECC
PGDIFGEELLHGAVRGQQVTALTDATLTPLHLQQLGLQELWEVTRSLSVQLQRMMSDGVH
CCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCE
IQDGDLRERIARYLLSLADSSLGGAHRDGTRYVRVTHELIAEGTGATRESVSKLIGELRD
EECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
DGLLTPAYRCLTLTDEAGLRALAGYDGV
CCCCCCHHHEEEECCHHCHHHHCCCCCC
>Mature Secondary Structure 
TLHLHPPSLPDFGHRSLRRGDTLYHVGDPASSLYRLESGLLRAVRLTPQGRTLTVRHIR
EEECCCCCCCCCCHHHHHCCCCEEECCCCHHHHHHHHHHHHHHEEECCCCCEEEEEECC
PGDIFGEELLHGAVRGQQVTALTDATLTPLHLQQLGLQELWEVTRSLSVQLQRMMSDGVH
CCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCE
IQDGDLRERIARYLLSLADSSLGGAHRDGTRYVRVTHELIAEGTGATRESVSKLIGELRD
EECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
DGLLTPAYRCLTLTDEAGLRALAGYDGV
CCCCCCHHHEEEECCHHCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1630321 [H]