| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
Click here to switch to the map view.
The map label for this gene is 94985517
Identifier: 94985517
GI number: 94985517
Start: 1503561
End: 1505381
Strand: Reverse
Name: 94985517
Synonym: Dgeo_1417
Alternate gene names: NA
Gene position: 1505381-1503561 (Counterclockwise)
Preceding gene: 94985518
Following gene: 94985516
Centisome position: 61.02
GC content: 64.96
Gene sequence:
>1821_bases ATGACGGGGCCAAGTGTGAGTAGGCCGGACGAGCGCATCGGCATGGTGCTGGGCACCGAGGACGCTACCCCGGTGACCTT TTGGTTCGCGGTCAGTCCTGGCGCGAGCGTACAGATGGACGACCTGGTGGTGGTTCGCACGCAGAAACCGAACGGGCAGC CGGTCCATTTCTACGGCATCGTTGATCACGTCCGCACCCGGCATGAGGGCGTCACTTTCGACAGTGACGTGGCCGACGTG GTGGCGGGTCTGTTGCCGGCCAGCGTGAGCTATGCCGCGCGCGTGCTGGTGACGCGGGTAGACCCCGAAGACTTTATTCC GCCTCAGCCCGGCGACGAGGTGCGGCACGCGCGGGGCGACGACCTGCGCCTGGCGCTCAGCGCCGACAAGATGGACTACG CCTTTGCGGGCGGCCTCCTCGCGGACGGGCAGGTCTTGCCGGTCAATTACCAGTTCGTGAACGGGGAGCAGGGCGGCCAC ATCAACATCAGTGGGATTTCCGGTGTGGCGACCAAGACGAGTTACGCCCTTTTCCTGCTGCATTCGATCTTCCGGGGCGG CGTGCTGGCGCAGCGGCGTGAGGGGCACAACACCCGCGCCCTGATCTTCAACGTGAAGGGCGAGGACCTGCTCTTTCTGG ACAAGCCCAACGCAAAGGTGGGCCAGAAAGAGGAGGGCGTGCGGGCGCGTAAGGGTTGGCGCGAGGGCCGCTACGACCTG CTGGGCCTGCCCACCGAACCGTTCCGTGACGTGCAGTTTCTCGCGCCGCCCAAGGGGGGAGCGGGCGACGTGATCGTACC GGACGTAGAGCAGCGCTCGGAGGGCGTCATCCCCTTCGTTTTCAGCCTGCGCGAATTCTGCACGAAGCGGATGCTGCCCT ACGTCTTCTCGGACGCCGGAACCAGCCTGAACCTGGGCTTCGTGATCGGCAACATCGAGGAAAAGCTCGCGCGCCTGGCC GCCGGGGACGACGCGCCCTATCTCACGGTCGAGGACTGGCAGCCTGACACGGAAGTGCTGCTCTCCGAAAACCTGCGCTT TGATGAGATGGGCAAGACGCGCATCGAAACCTTTGGGGCGCTCGTCTCCTACCTCGAATACAAGCTGCTGGAGCAAAACG ACGGCGAGGGCGATTCCAAGTGGGTGCTCAAGCAAAACGGGGGCACCCTGCGCGCCTTTATCCGCCGCTTGCGTGGCGTG CAAAAGCACCTCTCGCCGCTGGTGCGCGGTGACCTCACACCAGCGCAGGCCGCAAAGTACCGCCCGGACATTCTGAGACA AGGGGTGCAGACCAGCGTGGTCGACATCCACAAGCTGGGCGCACACGCGCAGAGCTTTGTGGTGGGCGTGCTGCTGCGTG ACCTCTTCGAGCACAAGGAGCGCTACGGGCGGCAAGACACGGTGTTTGTTGTCCTCGATGAGCTGAACAAGTACGCGCCG CGCGAGGGAGATAGCCCAATCAAGGACGTGCTGCTGGACATCGCAGAACGCGGGCGCTCCCTCGGGATCATCCTGATCGG GGCGCAGCAGACCGCTTCGGAAGTCGAGCGGCGCATTGTCTCCAATGCAGCCATTCGTGTGGTGGGTCGCCTCGATCTCG CGGAAGCTGAGCGGCCCGAGTACCGCTTCCTCCCGCAGAGCTTCCGCGCCCGCGCGGGCATCCTTCAGCCGGGGACCATG TTGGTCTCTCAGCCCGACGTCCCCAATCCGGTCCTAGTGGGCTACCCCTTTCCCGCCTGGGCCACCCGCCGCGACGAGGT GGCCGAGAGTGTGACGGTGCAGGAGACAGAGGACACGGGCAAAGACTGGCTGGGCCTATAG
Upstream 100 bases:
>100_bases CCCTCGAGCAGGCCATGACCCGCGCGATGGGGAGTGCCGACCTCGTGATTCGTCGCCTGCGTGCGCACCTGGCCCGCGAA CTGGGCCAGCCGGTGAGCGC
Downstream 100 bases:
>100_bases ACCTGCCCAGGGCCTGATGCTGTCCTGCCTCGCCCGCCCGCTTCTGATCCGCCCGGCTGGACACGCCGCCCCGTTTCCTC ATCCTTACCCCTACACTAGG
Product: hypothetical protein
Products: NA
Alternate protein names: Cytoplasmic Protein; ATPase
Number of amino acids: Translated: 606; Mature: 605
Protein sequence:
>606_residues MTGPSVSRPDERIGMVLGTEDATPVTFWFAVSPGASVQMDDLVVVRTQKPNGQPVHFYGIVDHVRTRHEGVTFDSDVADV VAGLLPASVSYAARVLVTRVDPEDFIPPQPGDEVRHARGDDLRLALSADKMDYAFAGGLLADGQVLPVNYQFVNGEQGGH INISGISGVATKTSYALFLLHSIFRGGVLAQRREGHNTRALIFNVKGEDLLFLDKPNAKVGQKEEGVRARKGWREGRYDL LGLPTEPFRDVQFLAPPKGGAGDVIVPDVEQRSEGVIPFVFSLREFCTKRMLPYVFSDAGTSLNLGFVIGNIEEKLARLA AGDDAPYLTVEDWQPDTEVLLSENLRFDEMGKTRIETFGALVSYLEYKLLEQNDGEGDSKWVLKQNGGTLRAFIRRLRGV QKHLSPLVRGDLTPAQAAKYRPDILRQGVQTSVVDIHKLGAHAQSFVVGVLLRDLFEHKERYGRQDTVFVVLDELNKYAP REGDSPIKDVLLDIAERGRSLGIILIGAQQTASEVERRIVSNAAIRVVGRLDLAEAERPEYRFLPQSFRARAGILQPGTM LVSQPDVPNPVLVGYPFPAWATRRDEVAESVTVQETEDTGKDWLGL
Sequences:
>Translated_606_residues MTGPSVSRPDERIGMVLGTEDATPVTFWFAVSPGASVQMDDLVVVRTQKPNGQPVHFYGIVDHVRTRHEGVTFDSDVADV VAGLLPASVSYAARVLVTRVDPEDFIPPQPGDEVRHARGDDLRLALSADKMDYAFAGGLLADGQVLPVNYQFVNGEQGGH INISGISGVATKTSYALFLLHSIFRGGVLAQRREGHNTRALIFNVKGEDLLFLDKPNAKVGQKEEGVRARKGWREGRYDL LGLPTEPFRDVQFLAPPKGGAGDVIVPDVEQRSEGVIPFVFSLREFCTKRMLPYVFSDAGTSLNLGFVIGNIEEKLARLA AGDDAPYLTVEDWQPDTEVLLSENLRFDEMGKTRIETFGALVSYLEYKLLEQNDGEGDSKWVLKQNGGTLRAFIRRLRGV QKHLSPLVRGDLTPAQAAKYRPDILRQGVQTSVVDIHKLGAHAQSFVVGVLLRDLFEHKERYGRQDTVFVVLDELNKYAP REGDSPIKDVLLDIAERGRSLGIILIGAQQTASEVERRIVSNAAIRVVGRLDLAEAERPEYRFLPQSFRARAGILQPGTM LVSQPDVPNPVLVGYPFPAWATRRDEVAESVTVQETEDTGKDWLGL >Mature_605_residues TGPSVSRPDERIGMVLGTEDATPVTFWFAVSPGASVQMDDLVVVRTQKPNGQPVHFYGIVDHVRTRHEGVTFDSDVADVV AGLLPASVSYAARVLVTRVDPEDFIPPQPGDEVRHARGDDLRLALSADKMDYAFAGGLLADGQVLPVNYQFVNGEQGGHI NISGISGVATKTSYALFLLHSIFRGGVLAQRREGHNTRALIFNVKGEDLLFLDKPNAKVGQKEEGVRARKGWREGRYDLL GLPTEPFRDVQFLAPPKGGAGDVIVPDVEQRSEGVIPFVFSLREFCTKRMLPYVFSDAGTSLNLGFVIGNIEEKLARLAA GDDAPYLTVEDWQPDTEVLLSENLRFDEMGKTRIETFGALVSYLEYKLLEQNDGEGDSKWVLKQNGGTLRAFIRRLRGVQ KHLSPLVRGDLTPAQAAKYRPDILRQGVQTSVVDIHKLGAHAQSFVVGVLLRDLFEHKERYGRQDTVFVVLDELNKYAPR EGDSPIKDVLLDIAERGRSLGIILIGAQQTASEVERRIVSNAAIRVVGRLDLAEAERPEYRFLPQSFRARAGILQPGTML VSQPDVPNPVLVGYPFPAWATRRDEVAESVTVQETEDTGKDWLGL
Specific function: Unknown
COG id: COG0433
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66872; Mature: 66741
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGPSVSRPDERIGMVLGTEDATPVTFWFAVSPGASVQMDDLVVVRTQKPNGQPVHFYGI CCCCCCCCCHHHEEEEEECCCCCCEEEEEEECCCCCEEECCEEEEEECCCCCCEEEEEEE VDHVRTRHEGVTFDSDVADVVAGLLPASVSYAARVLVTRVDPEDFIPPQPGDEVRHARGD HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCHHHCCCCCCCHHHHHCCCC DLRLALSADKMDYAFAGGLLADGQVLPVNYQFVNGEQGGHINISGISGVATKTSYALFLL CEEEEEECCCCCHHHCCCEEECCEEEEEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHH HSIFRGGVLAQRREGHNTRALIFNVKGEDLLFLDKPNAKVGQKEEGVRARKGWREGRYDL HHHHHCCCHHHHHCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCHHHCCCCCCCCEE LGLPTEPFRDVQFLAPPKGGAGDVIVPDVEQRSEGVIPFVFSLREFCTKRMLPYVFSDAG ECCCCCCCCCCEEECCCCCCCCCEEECCHHHHCCCCCHHHHHHHHHHHHHCCCHHCCCCC TSLNLGFVIGNIEEKLARLAAGDDAPYLTVEDWQPDTEVLLSENLRFDEMGKTRIETFGA CEEEEEEEECCHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHCCCCHHHCCHHHHHHHHH LVSYLEYKLLEQNDGEGDSKWVLKQNGGTLRAFIRRLRGVQKHLSPLVRGDLTPAQAAKY HHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCC RPDILRQGVQTSVVDIHKLGAHAQSFVVGVLLRDLFEHKERYGRQDTVFVVLDELNKYAP CHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHCC REGDSPIKDVLLDIAERGRSLGIILIGAQQTASEVERRIVSNAAIRVVGRLDLAEAERPE CCCCCHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCC YRFLPQSFRARAGILQPGTMLVSQPDVPNPVLVGYPFPAWATRRDEVAESVTVQETEDTG CCCCCHHHHHHCCCCCCCCEEEECCCCCCCEEEECCCCCCCCCHHHHHHCCEEEECCCCC KDWLGL CHHCCC >Mature Secondary Structure TGPSVSRPDERIGMVLGTEDATPVTFWFAVSPGASVQMDDLVVVRTQKPNGQPVHFYGI CCCCCCCCHHHEEEEEECCCCCCEEEEEEECCCCCEEECCEEEEEECCCCCCEEEEEEE VDHVRTRHEGVTFDSDVADVVAGLLPASVSYAARVLVTRVDPEDFIPPQPGDEVRHARGD HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCHHHCCCCCCCHHHHHCCCC DLRLALSADKMDYAFAGGLLADGQVLPVNYQFVNGEQGGHINISGISGVATKTSYALFLL CEEEEEECCCCCHHHCCCEEECCEEEEEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHH HSIFRGGVLAQRREGHNTRALIFNVKGEDLLFLDKPNAKVGQKEEGVRARKGWREGRYDL HHHHHCCCHHHHHCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCHHHCCCCCCCCEE LGLPTEPFRDVQFLAPPKGGAGDVIVPDVEQRSEGVIPFVFSLREFCTKRMLPYVFSDAG ECCCCCCCCCCEEECCCCCCCCCEEECCHHHHCCCCCHHHHHHHHHHHHHCCCHHCCCCC TSLNLGFVIGNIEEKLARLAAGDDAPYLTVEDWQPDTEVLLSENLRFDEMGKTRIETFGA CEEEEEEEECCHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHCCCCHHHCCHHHHHHHHH LVSYLEYKLLEQNDGEGDSKWVLKQNGGTLRAFIRRLRGVQKHLSPLVRGDLTPAQAAKY HHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCC RPDILRQGVQTSVVDIHKLGAHAQSFVVGVLLRDLFEHKERYGRQDTVFVVLDELNKYAP CHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHCC REGDSPIKDVLLDIAERGRSLGIILIGAQQTASEVERRIVSNAAIRVVGRLDLAEAERPE CCCCCHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCC YRFLPQSFRARAGILQPGTMLVSQPDVPNPVLVGYPFPAWATRRDEVAESVTVQETEDTG CCCCCHHHHHHCCCCCCCCEEEECCCCCCCEEEECCCCCCCCCHHHHHHCCEEEECCCCC KDWLGL CHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA