| Definition | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence. |
|---|---|
| Accession | NC_008010 |
| Length | 574,127 |
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The map label for this gene is 94972268
Identifier: 94972268
GI number: 94972268
Start: 222516
End: 223586
Strand: Direct
Name: 94972268
Synonym: Dgeo_2802
Alternate gene names: NA
Gene position: 222516-223586 (Clockwise)
Preceding gene: 94972270
Following gene: 94972267
Centisome position: 38.76
GC content: 67.79
Gene sequence:
>1071_bases GTGACGCTGAGCGAAAGGGGAAAGGACTTCCATTCCACCCTACCGAACACTTCCCCGCCAGGGGGCCACATTTCTGCACC ACCTTCCCGCCTTCCCCTAACGCCCCCACCTCTACACTCACTGCCCCTATGCTCCCGCTCGACCTTCCCTTCGCCGTTCT GCGCGTCACTCTGCGGGCGCTGGATATGGTGCATCTGCCGCCCCAAGCTCGAAGGGGCGTTCGGGCGAGCGCTCTACCGC TTGGCCTGCACGCAGCCGGGGCGAGAGACGTGTCAGGGCTGCCCCCTTCAGAGCCTCTGCCCCTACGGCCTGAGCTACAC ACCCCGACTGCCGCAAAGCCTTCAGGTGGCCTCATTGGGCACGCCGCCGCGCCCCATCATCTTCCGGGTGGCCTACGGCG AGGAACGCTCCCTGGCCCCCGGCGAGCTGCTCAGCTTCGGGCTGGTGGTGGTGGGGCGAGCAGTTGCGCAGCTCCCGTAC CTGCTGGCGGCCCTGCGTGAGGTGGGCAGGGAGGGGTTGGGACTCCGGCGGGGAAGGCTGGAGCTGGAAGAGGTGCGGAG TGTCCAGCCCTACACCGGGGAAGAGGTGACCCTGCTGCGGGGTGGAGAGCTGGGCGTGAACCTCGCACCCCTGCTGCTGG GAGCGAGCGATGGGCCGCCGGTCAGCGGCCACCGCCTGCGTCTGCAGCTGCACTCGCCCCTTCATATCAAAGCAGGCGGG GGACTGGCGCGGGAGCTGCATTTTCCGGTTCTGCTGCGCGCCTTGCAGCGGCGCATGAGCAACCTGGAGCAACTCTACGG TGGCGCACTCAGCCGGGGAGCCGACTTCACCCAGCTGCCGCTGCTGGCCCGCCGGATCGAGACCGTTCGCCAGGACCTGC ACCTCGTCTCACAACTGCGCAAGGGGAGCCGTCCACATCAGCAGACAACCATGGAAGGGCTGGTCGGTACCGTGGACTAC CGCGGCGATTTCACGCCGTTTGCGTCCCTCCTCCGCCTCGGCGAACAGCTCGGCGTGGGCAAGTGGGCGCACTTCGGCGC GGGCCTGTACGACCTGGAGGCTTTGCCATGA
Upstream 100 bases:
>100_bases GCAACTCGCGACTGATAGGCATAGGGCGGGTGTCCGAACAGAGCGGACAAGGCAGAATGAGTGTCCATACGTGCACCTTG GCAGGGGGAGGCGTCACTCA
Downstream 100 bases:
>100_bases CCCTGACCCGCAAGCGTGAGCAGGGCAGGCGGCGGCTGCAGCTGCTCGCCCTGCTCAGCGAGGCAGAGATGTCAGCCGCG AGAGGTCCAGCGAGATCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MTLSERGKDFHSTLPNTSPPGGHISAPPSRLPLTPPPLHSLPLCSRSTFPSPFCASLCGRWIWCICRPKLEGAFGRALYR LACTQPGRETCQGCPLQSLCPYGLSYTPRLPQSLQVASLGTPPRPIIFRVAYGEERSLAPGELLSFGLVVVGRAVAQLPY LLAALREVGREGLGLRRGRLELEEVRSVQPYTGEEVTLLRGGELGVNLAPLLLGASDGPPVSGHRLRLQLHSPLHIKAGG GLARELHFPVLLRALQRRMSNLEQLYGGALSRGADFTQLPLLARRIETVRQDLHLVSQLRKGSRPHQQTTMEGLVGTVDY RGDFTPFASLLRLGEQLGVGKWAHFGAGLYDLEALP
Sequences:
>Translated_356_residues MTLSERGKDFHSTLPNTSPPGGHISAPPSRLPLTPPPLHSLPLCSRSTFPSPFCASLCGRWIWCICRPKLEGAFGRALYR LACTQPGRETCQGCPLQSLCPYGLSYTPRLPQSLQVASLGTPPRPIIFRVAYGEERSLAPGELLSFGLVVVGRAVAQLPY LLAALREVGREGLGLRRGRLELEEVRSVQPYTGEEVTLLRGGELGVNLAPLLLGASDGPPVSGHRLRLQLHSPLHIKAGG GLARELHFPVLLRALQRRMSNLEQLYGGALSRGADFTQLPLLARRIETVRQDLHLVSQLRKGSRPHQQTTMEGLVGTVDY RGDFTPFASLLRLGEQLGVGKWAHFGAGLYDLEALP >Mature_355_residues TLSERGKDFHSTLPNTSPPGGHISAPPSRLPLTPPPLHSLPLCSRSTFPSPFCASLCGRWIWCICRPKLEGAFGRALYRL ACTQPGRETCQGCPLQSLCPYGLSYTPRLPQSLQVASLGTPPRPIIFRVAYGEERSLAPGELLSFGLVVVGRAVAQLPYL LAALREVGREGLGLRRGRLELEEVRSVQPYTGEEVTLLRGGELGVNLAPLLLGASDGPPVSGHRLRLQLHSPLHIKAGGG LARELHFPVLLRALQRRMSNLEQLYGGALSRGADFTQLPLLARRIETVRQDLHLVSQLRKGSRPHQQTTMEGLVGTVDYR GDFTPFASLLRLGEQLGVGKWAHFGAGLYDLEALP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38771; Mature: 38639
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSERGKDFHSTLPNTSPPGGHISAPPSRLPLTPPPLHSLPLCSRSTFPSPFCASLCGR CCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH WIWCICRPKLEGAFGRALYRLACTQPGRETCQGCPLQSLCPYGLSYTPRLPQSLQVASLG HEEEHCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCHHHHCCCCCCCCCCCCCCCCHHCCC TPPRPIIFRVAYGEERSLAPGELLSFGLVVVGRAVAQLPYLLAALREVGREGLGLRRGRL CCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC ELEEVRSVQPYTGEEVTLLRGGELGVNLAPLLLGASDGPPVSGHRLRLQLHSPLHIKAGG CHHHHHCCCCCCCCEEEEEECCCCCCCHHHHEEECCCCCCCCCCEEEEEECCCEEEECCC GLARELHFPVLLRALQRRMSNLEQLYGGALSRGADFTQLPLLARRIETVRQDLHLVSQLR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KGSRPHQQTTMEGLVGTVDYRGDFTPFASLLRLGEQLGVGKWAHFGAGLYDLEALP HCCCCCHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCCCHHHHHCCCHHHCCCCC >Mature Secondary Structure TLSERGKDFHSTLPNTSPPGGHISAPPSRLPLTPPPLHSLPLCSRSTFPSPFCASLCGR CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH WIWCICRPKLEGAFGRALYRLACTQPGRETCQGCPLQSLCPYGLSYTPRLPQSLQVASLG HEEEHCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCHHHHCCCCCCCCCCCCCCCCHHCCC TPPRPIIFRVAYGEERSLAPGELLSFGLVVVGRAVAQLPYLLAALREVGREGLGLRRGRL CCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC ELEEVRSVQPYTGEEVTLLRGGELGVNLAPLLLGASDGPPVSGHRLRLQLHSPLHIKAGG CHHHHHCCCCCCCCEEEEEECCCCCCCHHHHEEECCCCCCCCCCEEEEEECCCEEEECCC GLARELHFPVLLRALQRRMSNLEQLYGGALSRGADFTQLPLLARRIETVRQDLHLVSQLR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KGSRPHQQTTMEGLVGTVDYRGDFTPFASLLRLGEQLGVGKWAHFGAGLYDLEALP HCCCCCHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCCCHHHHHCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA