| Definition | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence. |
|---|---|
| Accession | NC_008010 |
| Length | 574,127 |
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The map label for this gene is 94972270
Identifier: 94972270
GI number: 94972270
Start: 220667
End: 221380
Strand: Direct
Name: 94972270
Synonym: Dgeo_2805
Alternate gene names: NA
Gene position: 220667-221380 (Clockwise)
Preceding gene: 94972271
Following gene: 94972268
Centisome position: 38.44
GC content: 63.87
Gene sequence:
>714_bases GTGGTGCTGTACGCGGTGTACGGGGACCTGAAGTTTCCTGTGGGCTACCGAGTGTACCGGGGGAAGGGGACCCCTTCCCC CGTCCGGCTCGCCCTGGAACTGCTGGCCACCGTGCCTGCCGAAGTGAGCCGTCGCTTTGACGTGTGGGTGCTGGCGGACA GCGGGTTTGAGTCATCCGCGTTCCTGCAAGGCGTGCGGGACCTGGGCTTCGAGTTCGTGGTCGGCGTCCGCTCAACTCGC CGCACTGACCATCCCGGTCACGTCACGGTGGAGGACTGCGAACACGGGAGCTGGGTGAATCTCGCCAACTGGCCCTGGGA CACCCTGACGCTGGCCCGGATTCACCGAGGAGAGCGCACCTTTTTCTCGGTGGCATCACAACTGCTCCCGGGCGACCTCG TCGCCCGGGAGGGAGCACGGCGCTGGGCTATTGAGTCGTTTTTCAAGGAGGCCAAGCATGGCTTCGGGTTGAATCGGTTC GCGTTGCGAACCGCTCAAGGGCTGGACCGCTGGGTGCTGCTGGTCTTCGCTGCCTTTACCTTGTCCATGCTCTGCCGAAC CGATGCCTTGTCCCTGGAACAGGCAGCGGAAGTTGCCGCTCGGGTGGCTCTGCCACTGCTGGTCGTTCAGCGACTCGCGG TCCAGGTCTGGCGAGAGGAAGAATTCCTGCGCCAGCACGGCTATTCACTGACCCTATCCAGGTGCAAGACCTAA
Upstream 100 bases:
>100_bases TCCTCGTTTGCGTCTGTGCGTGGACCTGACCAGCATCCCGAAAACGGGACGCGAGCTGCCCTTCGTTCGCGTCTATCACT AGGTCTACGGGATTCATCTG
Downstream 100 bases:
>100_bases GATTTCCTTTCCTGGACATGCTCGGCGTGATTCCAGCGGACCGCCAGCGGTCCACGTACACCCGGCTCGCATACTGCACG CCCTGGTCCGAATGGTGCAG
Product: transposase, IS4
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MVLYAVYGDLKFPVGYRVYRGKGTPSPVRLALELLATVPAEVSRRFDVWVLADSGFESSAFLQGVRDLGFEFVVGVRSTR RTDHPGHVTVEDCEHGSWVNLANWPWDTLTLARIHRGERTFFSVASQLLPGDLVAREGARRWAIESFFKEAKHGFGLNRF ALRTAQGLDRWVLLVFAAFTLSMLCRTDALSLEQAAEVAARVALPLLVVQRLAVQVWREEEFLRQHGYSLTLSRCKT
Sequences:
>Translated_237_residues MVLYAVYGDLKFPVGYRVYRGKGTPSPVRLALELLATVPAEVSRRFDVWVLADSGFESSAFLQGVRDLGFEFVVGVRSTR RTDHPGHVTVEDCEHGSWVNLANWPWDTLTLARIHRGERTFFSVASQLLPGDLVAREGARRWAIESFFKEAKHGFGLNRF ALRTAQGLDRWVLLVFAAFTLSMLCRTDALSLEQAAEVAARVALPLLVVQRLAVQVWREEEFLRQHGYSLTLSRCKT >Mature_237_residues MVLYAVYGDLKFPVGYRVYRGKGTPSPVRLALELLATVPAEVSRRFDVWVLADSGFESSAFLQGVRDLGFEFVVGVRSTR RTDHPGHVTVEDCEHGSWVNLANWPWDTLTLARIHRGERTFFSVASQLLPGDLVAREGARRWAIESFFKEAKHGFGLNRF ALRTAQGLDRWVLLVFAAFTLSMLCRTDALSLEQAAEVAARVALPLLVVQRLAVQVWREEEFLRQHGYSLTLSRCKT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26754; Mature: 26754
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLYAVYGDLKFPVGYRVYRGKGTPSPVRLALELLATVPAEVSRRFDVWVLADSGFESSA CEEEEEECCEECCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHCCCEEEEEECCCCCHHH FLQGVRDLGFEFVVGVRSTRRTDHPGHVTVEDCEHGSWVNLANWPWDTLTLARIHRGERT HHHHHHHCCHHEEEECHHCCCCCCCCCEEEECCCCCCEECCCCCCCHHHHHHHHHCCCHH FFSVASQLLPGDLVAREGARRWAIESFFKEAKHGFGLNRFALRTAQGLDRWVLLVFAAFT HHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH LSMLCRTDALSLEQAAEVAARVALPLLVVQRLAVQVWREEEFLRQHGYSLTLSRCKT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHCCCC >Mature Secondary Structure MVLYAVYGDLKFPVGYRVYRGKGTPSPVRLALELLATVPAEVSRRFDVWVLADSGFESSA CEEEEEECCEECCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHCCCEEEEEECCCCCHHH FLQGVRDLGFEFVVGVRSTRRTDHPGHVTVEDCEHGSWVNLANWPWDTLTLARIHRGERT HHHHHHHCCHHEEEECHHCCCCCCCCCEEEECCCCCCEECCCCCCCHHHHHHHHHCCCHH FFSVASQLLPGDLVAREGARRWAIESFFKEAKHGFGLNRFALRTAQGLDRWVLLVFAAFT HHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH LSMLCRTDALSLEQAAEVAARVALPLLVVQRLAVQVWREEEFLRQHGYSLTLSRCKT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA