| Definition | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence. |
|---|---|
| Accession | NC_008010 |
| Length | 574,127 |
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The map label for this gene is 94972267
Identifier: 94972267
GI number: 94972267
Start: 223602
End: 224441
Strand: Direct
Name: 94972267
Synonym: Dgeo_2801
Alternate gene names: NA
Gene position: 223602-224441 (Clockwise)
Preceding gene: 94972268
Following gene: 94972266
Centisome position: 38.95
GC content: 67.38
Gene sequence:
>840_bases GTGAGCAGGGCAGGCGGCGGCTGCAGCTGCTCGCCCTGCTCAGCGAGGCAGAGATGTCAGCCGCGAGAGGTCCAGCGAGA TCTCCGCCTACTCAGAAGTGAAGGCTGGGACGTACTCCAGACCAACGAACGCCCGGCCCGCTCCTTCCTGGCACGGCCCT GGTCCGCCCAAGAGGTTGCGAACGACCCGGTGAGGGCGGTCATCCACCACGCCTTGTTGCGGCTGCTGCACCACCACGCG CCGACGCCCAGCCGCCTCTACCACGAGACGCTGCTCGAACTGAGCGGCCAACTGCCCGCACGGCTGCGCGAGGTTTCCCT GCGCTCTCTTACGCTGCCGGCGGGGGACACGCCGCGTACCCTGGAAACGCTGGCCGCGGCGTGGTGCTGGGGCGAACCCG TGCGCTTCACCTACCGCAAGCCGCGCGAGGAACCGAAAACGGGCGAGGCCGACGTGGTCTTCATGGAGATCAACCGCGAC AACCTCGACTGGTACGTCTTCGCCCGCAGGCGCGGCGAGGGGCAGGTCAAGACCTTCCACCTCTCGCGCTTTCTGGACGC GGCGCGCCTGACCACAGAGACCAGCCCTGAGATTGCCTTTGACCCCCGCCGTGAGTTGGACAGCGCGTGGGGCATCATCG GGGGCCGACAGCACTGCGAGGTCGCGCTGCGGTTTGCCCCGGAAGCGGTGCCGTATGTGGCTCACTGCGTCTGGCCAGGG CAGGTCACCGGCGAGATGGACGGCGCTCACTACCTGCTCAGACTCAAAGCGCCCCTCAACCGAGAGCACCTTTCCGTCGA GGTGATGGTCTGGATTCGCAGCTGTCGATCCGCGACGTAA
Upstream 100 bases:
>100_bases CCTCCTCCGCCTCGGCGAACAGCTCGGCGTGGGCAAGTGGGCGCACTTCGGCGCGGGCCTGTACGACCTGGAGGCTTTGC CATGACCCTGACCCGCAAGC
Downstream 100 bases:
>100_bases CGGCGACGCACTATTCCAGCAACAGTTCCTCGGCTCTCTAGAGGTCAAAAGTAGGGTGGTGGCACGAGGAGTCAGCTCCT GTACGGTGTTTTCTGCGTTG
Product: putative transcriptional regulator
Products: NA
Alternate protein names: Helix-Turn-Helix Type; Metal Dependent Phosphohydrolase; Transcriptional Regulator Protein
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MSRAGGGCSCSPCSARQRCQPREVQRDLRLLRSEGWDVLQTNERPARSFLARPWSAQEVANDPVRAVIHHALLRLLHHHA PTPSRLYHETLLELSGQLPARLREVSLRSLTLPAGDTPRTLETLAAAWCWGEPVRFTYRKPREEPKTGEADVVFMEINRD NLDWYVFARRRGEGQVKTFHLSRFLDAARLTTETSPEIAFDPRRELDSAWGIIGGRQHCEVALRFAPEAVPYVAHCVWPG QVTGEMDGAHYLLRLKAPLNREHLSVEVMVWIRSCRSAT
Sequences:
>Translated_279_residues MSRAGGGCSCSPCSARQRCQPREVQRDLRLLRSEGWDVLQTNERPARSFLARPWSAQEVANDPVRAVIHHALLRLLHHHA PTPSRLYHETLLELSGQLPARLREVSLRSLTLPAGDTPRTLETLAAAWCWGEPVRFTYRKPREEPKTGEADVVFMEINRD NLDWYVFARRRGEGQVKTFHLSRFLDAARLTTETSPEIAFDPRRELDSAWGIIGGRQHCEVALRFAPEAVPYVAHCVWPG QVTGEMDGAHYLLRLKAPLNREHLSVEVMVWIRSCRSAT >Mature_278_residues SRAGGGCSCSPCSARQRCQPREVQRDLRLLRSEGWDVLQTNERPARSFLARPWSAQEVANDPVRAVIHHALLRLLHHHAP TPSRLYHETLLELSGQLPARLREVSLRSLTLPAGDTPRTLETLAAAWCWGEPVRFTYRKPREEPKTGEADVVFMEINRDN LDWYVFARRRGEGQVKTFHLSRFLDAARLTTETSPEIAFDPRRELDSAWGIIGGRQHCEVALRFAPEAVPYVAHCVWPGQ VTGEMDGAHYLLRLKAPLNREHLSVEVMVWIRSCRSAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31758; Mature: 31626
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRAGGGCSCSPCSARQRCQPREVQRDLRLLRSEGWDVLQTNERPARSFLARPWSAQEVA CCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCEEECCCCHHHHHHCCCCCHHHHC NDPVRAVIHHALLRLLHHHAPTPSRLYHETLLELSGQLPARLREVSLRSLTLPAGDTPRT CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHEEECCCCCCCHH LETLAAAWCWGEPVRFTYRKPREEPKTGEADVVFMEINRDNLDWYVFARRRGEGQVKTFH HHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEHH LSRFLDAARLTTETSPEIAFDPRRELDSAWGIIGGRQHCEVALRFAPEAVPYVAHCVWPG HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHEECCCCHHHHHHEEECCC QVTGEMDGAHYLLRLKAPLNREHLSVEVMVWIRSCRSAT CCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure SRAGGGCSCSPCSARQRCQPREVQRDLRLLRSEGWDVLQTNERPARSFLARPWSAQEVA CCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCEEECCCCHHHHHHCCCCCHHHHC NDPVRAVIHHALLRLLHHHAPTPSRLYHETLLELSGQLPARLREVSLRSLTLPAGDTPRT CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHEEECCCCCCCHH LETLAAAWCWGEPVRFTYRKPREEPKTGEADVVFMEINRDNLDWYVFARRRGEGQVKTFH HHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEHH LSRFLDAARLTTETSPEIAFDPRRELDSAWGIIGGRQHCEVALRFAPEAVPYVAHCVWPG HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHEECCCCHHHHHHEEECCC QVTGEMDGAHYLLRLKAPLNREHLSVEVMVWIRSCRSAT CCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA