Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
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Accession | NC_007974 |
Length | 2,580,084 |
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The map label for this gene is feaR [C]
Identifier: 94313234
GI number: 94313234
Start: 902674
End: 903639
Strand: Reverse
Name: feaR [C]
Synonym: Rmet_4308
Alternate gene names: 94313234
Gene position: 903639-902674 (Counterclockwise)
Preceding gene: 94313237
Following gene: 94313233
Centisome position: 35.02
GC content: 61.39
Gene sequence:
>966_bases ATGGGGAACGAGCTTGGGCAACTACAACGCTGGAGCACCGATCTGGTCCCAGCGACGCAAAGACGTGAGTACTTCCAGGC CGCCACCGAGTCGGCCATCATTCCGTTCCAGTTCGAAACGCCCTATTCGCCCGATCTGAGCGCGAAGATCGAGGCTCTGG CGCTCGGTCCCATTACCGTGATGCATGTGGCAGGCTCCCCCCATATCGCGCGGAGCACGGCCGCTGAGATTTCACGACAA CGCGCACGCTGCCTGAATCTGGTGCTCAGCCGAAACGTTCCCTGGAACCTGGGCTACCAGTCGAGAGTTTCGATGCGCCC CATGGATTCATTCATTACGGATTCCCAGCAGGCGCTAAGCCTCGATATCGCTTTCGACTACGACTTCGTCAATATCGGCT TCGATCCGCAGTGGCTAAGCGAGTGGGTCCCTCAGACAGGCACAGTGGTCGGCAGGCAGTTTGGCGCTGACTCGCGCTGG GCAGTGGCGCTGAACACATTCATCGCGGCATTGCAGCCCACCGCAATCCTCAATGCGCCGCTCCCGCCCCGGCTGATCGT GGACCAGCTCGGTGCGCTGATTCTTCTGGCGTCGAGCGGACCAGATCAGGTCGCCACGCATAAACACGAGACCTCGAAGC CGCTGAACGAGAGAATCCTCGACTGCATTCGTTCGCGATGCACCGAGTCCACGCTGGTCGCGCCGCAGGTGGCAGCAGAC CTGGGAATTTCGGTGCGATCCCTGCATCGCGTACTGGCCGCTCAAAACGAGACCTTTGGCTTCCTGCTGATGAAGGCCCG CATCGATATCGCCGTGCGCCAATTGTCATCGCCGGCGTTCAATCGCCTCACCGTGGCTGCCATTGGCCGCAGGTGCGGCT TCACTGACGACTCTCACTTCACGCGCGTTTTCCGGCGGCATGTGGGCGTGACGCCGCTAGCCTTGCGCCGGGCTCGGCTT GCATAG
Upstream 100 bases:
>100_bases TGATATGCTTTGATGGATTGACTATTCATGACAGCAACACAGAATGCGTGGACGCTACGTGCCAGCCACGCCGACGACGA TCCATGAGTGGGGAAAAAGG
Downstream 100 bases:
>100_bases CCGGGATCCAACTGGCACAACATATCGCCTGCAGATCACTGATCGAACCCTCTCCACATTCCTCAGGCTCTACGCGAAAG ATCGCCCTTGAATTTTGTAT
Product: AraC family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator AraC Family; Transcriptional Regulator; AraC/XylS Family Transcriptional Regulator; Regulatory Protein; AraC/XylS Family Transcription Factor
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MGNELGQLQRWSTDLVPATQRREYFQAATESAIIPFQFETPYSPDLSAKIEALALGPITVMHVAGSPHIARSTAAEISRQ RARCLNLVLSRNVPWNLGYQSRVSMRPMDSFITDSQQALSLDIAFDYDFVNIGFDPQWLSEWVPQTGTVVGRQFGADSRW AVALNTFIAALQPTAILNAPLPPRLIVDQLGALILLASSGPDQVATHKHETSKPLNERILDCIRSRCTESTLVAPQVAAD LGISVRSLHRVLAAQNETFGFLLMKARIDIAVRQLSSPAFNRLTVAAIGRRCGFTDDSHFTRVFRRHVGVTPLALRRARL A
Sequences:
>Translated_321_residues MGNELGQLQRWSTDLVPATQRREYFQAATESAIIPFQFETPYSPDLSAKIEALALGPITVMHVAGSPHIARSTAAEISRQ RARCLNLVLSRNVPWNLGYQSRVSMRPMDSFITDSQQALSLDIAFDYDFVNIGFDPQWLSEWVPQTGTVVGRQFGADSRW AVALNTFIAALQPTAILNAPLPPRLIVDQLGALILLASSGPDQVATHKHETSKPLNERILDCIRSRCTESTLVAPQVAAD LGISVRSLHRVLAAQNETFGFLLMKARIDIAVRQLSSPAFNRLTVAAIGRRCGFTDDSHFTRVFRRHVGVTPLALRRARL A >Mature_320_residues GNELGQLQRWSTDLVPATQRREYFQAATESAIIPFQFETPYSPDLSAKIEALALGPITVMHVAGSPHIARSTAAEISRQR ARCLNLVLSRNVPWNLGYQSRVSMRPMDSFITDSQQALSLDIAFDYDFVNIGFDPQWLSEWVPQTGTVVGRQFGADSRWA VALNTFIAALQPTAILNAPLPPRLIVDQLGALILLASSGPDQVATHKHETSKPLNERILDCIRSRCTESTLVAPQVAADL GISVRSLHRVLAAQNETFGFLLMKARIDIAVRQLSSPAFNRLTVAAIGRRCGFTDDSHFTRVFRRHVGVTPLALRRARLA
Specific function: Positive Regulator Of Tyna/Maoa And Feab/Pada, The Genes For 2-Phenylethylamine Catabolism. [C]
COG id: COG2207
COG function: function code K; AraC-type DNA-binding domain-containing proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35468; Mature: 35337
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNELGQLQRWSTDLVPATQRREYFQAATESAIIPFQFETPYSPDLSAKIEALALGPITV CCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEECCEEE MHVAGSPHIARSTAAEISRQRARCLNLVLSRNVPWNLGYQSRVSMRPMDSFITDSQQALS EEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCHHEE LDIAFDYDFVNIGFDPQWLSEWVPQTGTVVGRQFGADSRWAVALNTFIAALQPTAILNAP EEEEEECEEEECCCCHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCHHEECCC LPPRLIVDQLGALILLASSGPDQVATHKHETSKPLNERILDCIRSRCTESTLVAPQVAAD CCHHHHHHHCCCEEEEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHH LGISVRSLHRVLAAQNETFGFLLMKARIDIAVRQLSSPAFNRLTVAAIGRRCGFTDDSHF HCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHH TRVFRRHVGVTPLALRRARLA HHHHHHHCCCCHHHHHHHHCC >Mature Secondary Structure GNELGQLQRWSTDLVPATQRREYFQAATESAIIPFQFETPYSPDLSAKIEALALGPITV CCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEECCEEE MHVAGSPHIARSTAAEISRQRARCLNLVLSRNVPWNLGYQSRVSMRPMDSFITDSQQALS EEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCHHEE LDIAFDYDFVNIGFDPQWLSEWVPQTGTVVGRQFGADSRWAVALNTFIAALQPTAILNAP EEEEEECEEEECCCCHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCHHEECCC LPPRLIVDQLGALILLASSGPDQVATHKHETSKPLNERILDCIRSRCTESTLVAPQVAAD CCHHHHHHHCCCEEEEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHH LGISVRSLHRVLAAQNETFGFLLMKARIDIAVRQLSSPAFNRLTVAAIGRRCGFTDDSHF HCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHH TRVFRRHVGVTPLALRRARLA HHHHHHHCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA