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The map label for this gene is yezE [H]

Identifier: 94313233

GI number: 94313233

Start: 901921

End: 902523

Strand: Reverse

Name: yezE [H]

Synonym: Rmet_4307

Alternate gene names: 94313233

Gene position: 902523-901921 (Counterclockwise)

Preceding gene: 94313234

Following gene: 94313232

Centisome position: 34.98

GC content: 62.19

Gene sequence:

>603_bases
ATGGCACGACCTCGCCAATTTGACGCCCAAACAGCACTTTCCGCCGCGCAGGACGCGTTCTGGGCCAAGGGCTACAACGC
CACCTCGACCCGCGAACTGACGCAGGCGATGGGACTGACTCAACCTAGCCTCTACAACGCCTTTGGCGACAAACGCACAC
TGTTCCTGCAGGCGCTTGAGGACTACCTGAATCACACGCTGCGCGAACGGATTGCTCGACTGGAAGGCACCCTTCCACCG
GCCCAGGCGTTAGAAGCATTCTTTGCCGAAAGCATCGAGCGTGGCGTCTCCGATCCGCAGCATCGTGGATGCATGCTGAT
CAATACGGCGCTCGACGCATCGGCTGACGACCCTGAACTGGCGGCGATCGTTGCAGAGGAACTGACTACACTCGGTCACT
TCTTCGAACGCACCATTCGCGCGGGCCAGGCCGACGGGACTGTCGACCCGACACTCGCTGCCAGGGACGTTTCGGCCACG
CTGCTGTCGGTACAGATCGGCCTGCGCGTGATGTCTCGCGTCATGCCGGATCGCGCACTGCTCGAGGCATCCGTCAGACC
CGTACTGGCTCTGCTCGAACGTAAGCCGCGCGGCACGACCTGA

Upstream 100 bases:

>100_bases
TCTCCACATTCCTCAGGCTCTACGCGAAAGATCGCCCTTGAATTTTGTATCGATCTATCTAAAATACGTTTCATATCATT
CGATACAGAATCTCACTGCC

Downstream 100 bases:

>100_bases
CTTCTCCCTGAATTACGCTTCGCCTCTACGCGCGGCTGCCACCTGCGTGGGGCGGCGCTCGCCCAGAGGTATCCCCCCAT
GTCACAGAACACAGTCACCA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MARPRQFDAQTALSAAQDAFWAKGYNATSTRELTQAMGLTQPSLYNAFGDKRTLFLQALEDYLNHTLRERIARLEGTLPP
AQALEAFFAESIERGVSDPQHRGCMLINTALDASADDPELAAIVAEELTTLGHFFERTIRAGQADGTVDPTLAARDVSAT
LLSVQIGLRVMSRVMPDRALLEASVRPVLALLERKPRGTT

Sequences:

>Translated_200_residues
MARPRQFDAQTALSAAQDAFWAKGYNATSTRELTQAMGLTQPSLYNAFGDKRTLFLQALEDYLNHTLRERIARLEGTLPP
AQALEAFFAESIERGVSDPQHRGCMLINTALDASADDPELAAIVAEELTTLGHFFERTIRAGQADGTVDPTLAARDVSAT
LLSVQIGLRVMSRVMPDRALLEASVRPVLALLERKPRGTT
>Mature_199_residues
ARPRQFDAQTALSAAQDAFWAKGYNATSTRELTQAMGLTQPSLYNAFGDKRTLFLQALEDYLNHTLRERIARLEGTLPPA
QALEAFFAESIERGVSDPQHRGCMLINTALDASADDPELAAIVAEELTTLGHFFERTIRAGQADGTVDPTLAARDVSATL
LSVQIGLRVMSRVMPDRALLEASVRPVLALLERKPRGTT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081833, Length=172, Percent_Identity=27.3255813953488, Blast_Score=65, Evalue=2e-12,
Organism=Escherichia coli, GI87082397, Length=107, Percent_Identity=33.6448598130841, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 21869; Mature: 21738

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARPRQFDAQTALSAAQDAFWAKGYNATSTRELTQAMGLTQPSLYNAFGDKRTLFLQALE
CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHH
DYLNHTLRERIARLEGTLPPAQALEAFFAESIERGVSDPQHRGCMLINTALDASADDPEL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHH
AAIVAEELTTLGHFFERTIRAGQADGTVDPTLAARDVSATLLSVQIGLRVMSRVMPDRAL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LEASVRPVLALLERKPRGTT
HHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ARPRQFDAQTALSAAQDAFWAKGYNATSTRELTQAMGLTQPSLYNAFGDKRTLFLQALE
CCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHH
DYLNHTLRERIARLEGTLPPAQALEAFFAESIERGVSDPQHRGCMLINTALDASADDPEL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHH
AAIVAEELTTLGHFFERTIRAGQADGTVDPTLAARDVSATLLSVQIGLRVMSRVMPDRAL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LEASVRPVLALLERKPRGTT
HHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]