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The map label for this gene is rrf2 [H]

Identifier: 94313237

GI number: 94313237

Start: 906013

End: 906588

Strand: Reverse

Name: rrf2 [H]

Synonym: Rmet_4312

Alternate gene names: 94313237

Gene position: 906588-906013 (Counterclockwise)

Preceding gene: 94313238

Following gene: 94313234

Centisome position: 35.14

GC content: 61.28

Gene sequence:

>576_bases
ATGTCATTCATCAGCACCGGTGTGGAATACGGGTTGCATTGCCTCCTTTACCTGTCGCGCTCACAGGCGTCGGTGGAAAC
CGCTAGCGTGAGGGATCTCGCGGAACTGCAGGGTATCCCCGCTGACTATCTGGCGAAGTTGTTCACCAAGCTGGCGAAGG
CAAATCTCGTAGTCGCTACCGAAGGCATACGAGGCGGCTTCAGCCTGGCGCGGCCTGCAGACAAGATCACAGTGCACGAC
GTCGTCGTCGCCATCGATGGCGACAAGCCGCTGTTCGACTGTCTGGAGATCCGCGACCGCTGCGCGGTGTTCGACGAAGC
ACCACCCGCCTGGGCCACGCGCGGTGTGTGCTCGATCCATGCTGTCATGCAATCGGCGGAAAAGGCGATGCGGCATGAAC
TCAGGCAACACACGCTACTCGACATTGCCAATCGCGCCATCGACAAGGCACCCAACAGTTACGGGACGCAGGTGGTCCAA
TGGCTGACGGCCCGGTCCGTCAACCGTCGCGGCGAGAAGTCCGAAGAGTCGTTGCCGCCCGCGCGCAAGTCCGTACGGAC
GCGCAATCGTGCATAA

Upstream 100 bases:

>100_bases
ATCAGAACAAATCGCAGGTGCTCGCCAAACATACATTTGCTTGCGGATCAGCGTGTACCTGTATAACCTGACAACTACGA
TTCGATAACTCTTAGTTGCC

Downstream 100 bases:

>100_bases
AAAATCGCCTTCCAGATGGAAGGCGATTCTCATTTGACAGGCTGCTCAGAAAGCGGCACGAACCACGCCACCATCCGCAC
GCAGTGCAGCGCCATTTGTC

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MSFISTGVEYGLHCLLYLSRSQASVETASVRDLAELQGIPADYLAKLFTKLAKANLVVATEGIRGGFSLARPADKITVHD
VVVAIDGDKPLFDCLEIRDRCAVFDEAPPAWATRGVCSIHAVMQSAEKAMRHELRQHTLLDIANRAIDKAPNSYGTQVVQ
WLTARSVNRRGEKSEESLPPARKSVRTRNRA

Sequences:

>Translated_191_residues
MSFISTGVEYGLHCLLYLSRSQASVETASVRDLAELQGIPADYLAKLFTKLAKANLVVATEGIRGGFSLARPADKITVHD
VVVAIDGDKPLFDCLEIRDRCAVFDEAPPAWATRGVCSIHAVMQSAEKAMRHELRQHTLLDIANRAIDKAPNSYGTQVVQ
WLTARSVNRRGEKSEESLPPARKSVRTRNRA
>Mature_190_residues
SFISTGVEYGLHCLLYLSRSQASVETASVRDLAELQGIPADYLAKLFTKLAKANLVVATEGIRGGFSLARPADKITVHDV
VVAIDGDKPLFDCLEIRDRCAVFDEAPPAWATRGVCSIHAVMQSAEKAMRHELRQHTLLDIANRAIDKAPNSYGTQVVQW
LTARSVNRRGEKSEESLPPARKSVRTRNRA

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 21030; Mature: 20899

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFISTGVEYGLHCLLYLSRSQASVETASVRDLAELQGIPADYLAKLFTKLAKANLVVAT
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEE
EGIRGGFSLARPADKITVHDVVVAIDGDKPLFDCLEIRDRCAVFDEAPPAWATRGVCSIH
CCCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
AVMQSAEKAMRHELRQHTLLDIANRAIDKAPNSYGTQVVQWLTARSVNRRGEKSEESLPP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCH
ARKSVRTRNRA
HHHHHHHCCCC
>Mature Secondary Structure 
SFISTGVEYGLHCLLYLSRSQASVETASVRDLAELQGIPADYLAKLFTKLAKANLVVAT
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEE
EGIRGGFSLARPADKITVHDVVVAIDGDKPLFDCLEIRDRCAVFDEAPPAWATRGVCSIH
CCCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
AVMQSAEKAMRHELRQHTLLDIANRAIDKAPNSYGTQVVQWLTARSVNRRGEKSEESLPP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCH
ARKSVRTRNRA
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8335628 [H]