Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
---|---|
Accession | NC_007974 |
Length | 2,580,084 |
Click here to switch to the map view.
The map label for this gene is flgI [H]
Identifier: 94312673
GI number: 94312673
Start: 282788
End: 283972
Strand: Direct
Name: flgI [H]
Synonym: Rmet_3741
Alternate gene names: 94312673
Gene position: 282788-283972 (Clockwise)
Preceding gene: 94312672
Following gene: 94312674
Centisome position: 10.96
GC content: 66.58
Gene sequence:
>1185_bases ATGTTTTTGCCTCCGATGCCTTTCCACAAGCCAGGCTCGCTTTTGGGCACCCCGCCCGGCCTTCATTCCCGCTCAGGTCG TGCGGTCTTTCTTGCTGGCCTGCTGCTCGCGCTCTTCCTGGGCCTGGGCTTTGGCCACGCACATGCGGAACGCCTGAAGA ACCTGGCGACGTTCCAGGGCGTGCGCGACAACCCGCTCGTGGGCTATGGCCTGGTCGTGGGGCTGGACAATACCGGCGAC CAGACCATGCAGACGCCGTTCACCACGCAGAGCTTGCAGAACATGTTGTCGCAGCTTGGCATCACGCTGCCAGCGGGCAA GAACATGCAGCTCAAGAACGTGGCGGCGGTGATGGTGACCGCAGCGCTGCCGGCGTACGCACAGCCTGGCAGTCAGATCG ACGTGGTGGTGTCGTCGATGGGTAACGCCAAGAGCCTGCGCGGCGGCACGCTGCTGATGACGCCGCTCAAGGGTATCGAC GGGCAGGTGTACGCCGTGGCGCAGGGCAACATGCTGGTGGGCGGCGCGGGTGCATCGGCCAACGGCAGCAAGGTGCAGAT CAACCAGCTCGCCGTGGGCCGCATCGCCAACGGCGCCATCGTAGAGCGCGCCGTGCCTTCCTTCCAGCCGGAAGGCGGCT TCATGAACCTCGAGCTCAAGGACACCGACTTCGGCACCGTCGAGCGCGTGGTCGAGGCGATCAACCGCAATCTGGGCGCG GGAACGGCTGCCGCCATGGATGGCCGCGTGGTGCAGGTGCGCACGCCGCAGGCGCCATCGGCGCGCGTGGGATTCATGGC CCGGATCGAGAACCTCGACGTGACGCCGGCCAAGGCCGCCGCCAAGGTAATCCTGAATGCCCGCACGGGCTCGATCGTGA TGAACCAGGCAGTGACCGTGGAAGACTGCGCGATCGCGCACGGCAACCTGTCGGTCGTGATCAACACGCAGCCGGTCATC AGCCAGCCCGGGCCGTTCAGCCAGGGTCAGACCGTGGTGGCGCCGGTGTCGCAGATCGACATGAAGCAGGGCGGTGGATC ACTCCAGATCGTGAAGGCCGGCGCATCGCTGGCGGCAGTGGTGAAGGGCCTGAACGCGCTTGGCGCGACCCCGGCCGACT TGCAGACGATCCTGGAGGCCATGCGTGCCGCGGGCGCCCTGCGCGCCGAGCTGGAGATCATCTGA
Upstream 100 bases:
>100_bases GCGCGTATCGAGTACACCGCCAAGGGGTATATCGACGAAGCACAGAACATGGGCTGGCTGCAGCGCTTCTTCCTCAATGT CCTTCCGTTCTGATTTCGCC
Downstream 100 bases:
>100_bases TGACGGGCGCGACGCTCTCCGGGCAGTCCGATATCTCGCAGCGCTTCGCGCTCGACACGCAAGGGTTCGAGGCGCTCAAG AACCAGGCGCGCGCCGGCAA
Product: flagellar basal body P-ring protein
Products: NA
Alternate protein names: Basal body P-ring protein [H]
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MFLPPMPFHKPGSLLGTPPGLHSRSGRAVFLAGLLLALFLGLGFGHAHAERLKNLATFQGVRDNPLVGYGLVVGLDNTGD QTMQTPFTTQSLQNMLSQLGITLPAGKNMQLKNVAAVMVTAALPAYAQPGSQIDVVVSSMGNAKSLRGGTLLMTPLKGID GQVYAVAQGNMLVGGAGASANGSKVQINQLAVGRIANGAIVERAVPSFQPEGGFMNLELKDTDFGTVERVVEAINRNLGA GTAAAMDGRVVQVRTPQAPSARVGFMARIENLDVTPAKAAAKVILNARTGSIVMNQAVTVEDCAIAHGNLSVVINTQPVI SQPGPFSQGQTVVAPVSQIDMKQGGGSLQIVKAGASLAAVVKGLNALGATPADLQTILEAMRAAGALRAELEII
Sequences:
>Translated_394_residues MFLPPMPFHKPGSLLGTPPGLHSRSGRAVFLAGLLLALFLGLGFGHAHAERLKNLATFQGVRDNPLVGYGLVVGLDNTGD QTMQTPFTTQSLQNMLSQLGITLPAGKNMQLKNVAAVMVTAALPAYAQPGSQIDVVVSSMGNAKSLRGGTLLMTPLKGID GQVYAVAQGNMLVGGAGASANGSKVQINQLAVGRIANGAIVERAVPSFQPEGGFMNLELKDTDFGTVERVVEAINRNLGA GTAAAMDGRVVQVRTPQAPSARVGFMARIENLDVTPAKAAAKVILNARTGSIVMNQAVTVEDCAIAHGNLSVVINTQPVI SQPGPFSQGQTVVAPVSQIDMKQGGGSLQIVKAGASLAAVVKGLNALGATPADLQTILEAMRAAGALRAELEII >Mature_394_residues MFLPPMPFHKPGSLLGTPPGLHSRSGRAVFLAGLLLALFLGLGFGHAHAERLKNLATFQGVRDNPLVGYGLVVGLDNTGD QTMQTPFTTQSLQNMLSQLGITLPAGKNMQLKNVAAVMVTAALPAYAQPGSQIDVVVSSMGNAKSLRGGTLLMTPLKGID GQVYAVAQGNMLVGGAGASANGSKVQINQLAVGRIANGAIVERAVPSFQPEGGFMNLELKDTDFGTVERVVEAINRNLGA GTAAAMDGRVVQVRTPQAPSARVGFMARIENLDVTPAKAAAKVILNARTGSIVMNQAVTVEDCAIAHGNLSVVINTQPVI SQPGPFSQGQTVVAPVSQIDMKQGGGSLQIVKAGASLAAVVKGLNALGATPADLQTILEAMRAAGALRAELEII
Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]
COG id: COG1706
COG function: function code N; Flagellar basal-body P-ring protein
Gene ontology:
Cell location: Periplasm. Bacterial flagellum basal body (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flgI family [H]
Homologues:
Organism=Escherichia coli, GI1787320, Length=362, Percent_Identity=62.1546961325967, Blast_Score=400, Evalue=1e-112,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001782 [H]
Pfam domain/function: PF02119 FlgI [H]
EC number: NA
Molecular weight: Translated: 40562; Mature: 40562
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLPPMPFHKPGSLLGTPPGLHSRSGRAVFLAGLLLALFLGLGFGHAHAERLKNLATFQG CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC VRDNPLVGYGLVVGLDNTGDQTMQTPFTTQSLQNMLSQLGITLPAGKNMQLKNVAAVMVT CCCCCCEEEEEEEEECCCCCCCEECCCCHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHH AALPAYAQPGSQIDVVVSSMGNAKSLRGGTLLMTPLKGIDGQVYAVAQGNMLVGGAGASA HHCCHHCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEEEECCEEEEECCCCC NGSKVQINQLAVGRIANGAIVERAVPSFQPEGGFMNLELKDTDFGTVERVVEAINRNLGA CCCEEEEEEEEECCCCCCHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCC GTAAAMDGRVVQVRTPQAPSARVGFMARIENLDVTPAKAAAKVILNARTGSIVMNQAVTV CCHHHCCCEEEEEECCCCCCCHHHHEEEECCCCCCCHHHHEEEEEECCCCCEEEECCEEE EDCAIAHGNLSVVINTQPVISQPGPFSQGQTVVAPVSQIDMKQGGGSLQIVKAGASLAAV HHHEEECCCEEEEEECCCCCCCCCCCCCCCEEEECHHHHHHHCCCCEEEEEECCCHHHHH VKGLNALGATPADLQTILEAMRAAGALRAELEII HHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEEC >Mature Secondary Structure MFLPPMPFHKPGSLLGTPPGLHSRSGRAVFLAGLLLALFLGLGFGHAHAERLKNLATFQG CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC VRDNPLVGYGLVVGLDNTGDQTMQTPFTTQSLQNMLSQLGITLPAGKNMQLKNVAAVMVT CCCCCCEEEEEEEEECCCCCCCEECCCCHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHH AALPAYAQPGSQIDVVVSSMGNAKSLRGGTLLMTPLKGIDGQVYAVAQGNMLVGGAGASA HHCCHHCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEEEECCEEEEECCCCC NGSKVQINQLAVGRIANGAIVERAVPSFQPEGGFMNLELKDTDFGTVERVVEAINRNLGA CCCEEEEEEEEECCCCCCHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCC GTAAAMDGRVVQVRTPQAPSARVGFMARIENLDVTPAKAAAKVILNARTGSIVMNQAVTV CCHHHCCCEEEEEECCCCCCCHHHHEEEECCCCCCCHHHHEEEEEECCCCCEEEECCEEE EDCAIAHGNLSVVINTQPVISQPGPFSQGQTVVAPVSQIDMKQGGGSLQIVKAGASLAAV HHHEEECCCEEEEEECCCCCCCCCCCCCCCEEEECHHHHHHHCCCCEEEEEECCCHHHHH VKGLNALGATPADLQTILEAMRAAGALRAELEII HHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA