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The map label for this gene is flgH [H]

Identifier: 94312672

GI number: 94312672

Start: 282067

End: 282780

Strand: Direct

Name: flgH [H]

Synonym: Rmet_3740

Alternate gene names: 94312672

Gene position: 282067-282780 (Clockwise)

Preceding gene: 94312671

Following gene: 94312673

Centisome position: 10.93

GC content: 64.57

Gene sequence:

>714_bases
ATGACCATGGCCGCCACTCGCTCTGGCTCTCGCATCGTCGCATTCGTCGCGCACGCCATCGTCGGCCTGGCCGCGCTGGC
CAGCGGCGGCTGCGCGATGATGCCCAAGGAGCCGCTCGTGCAACTGCCCACCACAGCGCGCGCCGAATCGCGCCCGGTGA
GCGCACCCACGGGCTCGATCTTTGCGTCTTCCTACGCGGCGGGCAATCCGCTGTTCGAGGACCGGCGGCCACGTAATGTT
GGTGACATCCTGACCATCGTGATCACGGAGAACATCAACGCCAGCAAGAACTCGGGCTCCAACGCCAGCCGCGCCGGCAA
CAGCACGCTGAGCTTCAACGCGGTGCCGCGCGCGCTGGCTGGGCTGTTCAGCTCCGCTTCGAACGCCGACATCGGCGGTA
CCAACACGCTGAAGGCCAGCGGCGGGTCCTCCGCGAACAACACGTTCAACGGCACCATCACGGTGACCGTGCTGGAGGTG
CTGCCCAACGGCAACCTGGTGGTGTCCGGCGAAAAGCAGATGGCCATCAACCAGGGCGCGGAGTTCATTCGTTTCTCGGG
TGTAGTCAATCCGCGCACGATCACTGGCGACAATGGGGTGCTCTCCACCCAGGTGGCGGACGCGCGTATCGAGTACACCG
CCAAGGGGTATATCGACGAAGCACAGAACATGGGCTGGCTGCAGCGCTTCTTCCTCAATGTCCTTCCGTTCTGA

Upstream 100 bases:

>100_bases
GAGCATGATCCAGACCCAGCGCGCGTACGAAATCAACAGCAAGGCGGTGCAGACGTCGGATCAGATGCTGCAGCGTCTGA
CCCAGATGGGATAAATGGCA

Downstream 100 bases:

>100_bases
TTTCGCCATGTTTTTGCCTCCGATGCCTTTCCACAAGCCAGGCTCGCTTTTGGGCACCCCGCCCGGCCTTCATTCCCGCT
CAGGTCGTGCGGTCTTTCTT

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein [H]

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MTMAATRSGSRIVAFVAHAIVGLAALASGGCAMMPKEPLVQLPTTARAESRPVSAPTGSIFASSYAAGNPLFEDRRPRNV
GDILTIVITENINASKNSGSNASRAGNSTLSFNAVPRALAGLFSSASNADIGGTNTLKASGGSSANNTFNGTITVTVLEV
LPNGNLVVSGEKQMAINQGAEFIRFSGVVNPRTITGDNGVLSTQVADARIEYTAKGYIDEAQNMGWLQRFFLNVLPF

Sequences:

>Translated_237_residues
MTMAATRSGSRIVAFVAHAIVGLAALASGGCAMMPKEPLVQLPTTARAESRPVSAPTGSIFASSYAAGNPLFEDRRPRNV
GDILTIVITENINASKNSGSNASRAGNSTLSFNAVPRALAGLFSSASNADIGGTNTLKASGGSSANNTFNGTITVTVLEV
LPNGNLVVSGEKQMAINQGAEFIRFSGVVNPRTITGDNGVLSTQVADARIEYTAKGYIDEAQNMGWLQRFFLNVLPF
>Mature_236_residues
TMAATRSGSRIVAFVAHAIVGLAALASGGCAMMPKEPLVQLPTTARAESRPVSAPTGSIFASSYAAGNPLFEDRRPRNVG
DILTIVITENINASKNSGSNASRAGNSTLSFNAVPRALAGLFSSASNADIGGTNTLKASGGSSANNTFNGTITVTVLEVL
PNGNLVVSGEKQMAINQGAEFIRFSGVVNPRTITGDNGVLSTQVADARIEYTAKGYIDEAQNMGWLQRFFLNVLPF

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family [H]

Homologues:

Organism=Escherichia coli, GI1787319, Length=223, Percent_Identity=59.6412556053812, Blast_Score=240, Evalue=6e-65,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000527 [H]

Pfam domain/function: PF02107 FlgH [H]

EC number: NA

Molecular weight: Translated: 24614; Mature: 24483

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMAATRSGSRIVAFVAHAIVGLAALASGGCAMMPKEPLVQLPTTARAESRPVSAPTGSI
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCC
FASSYAAGNPLFEDRRPRNVGDILTIVITENINASKNSGSNASRAGNSTLSFNAVPRALA
EECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEECHHHHHHH
GLFSSASNADIGGTNTLKASGGSSANNTFNGTITVTVLEVLPNGNLVVSGEKQMAINQGA
HHHHCCCCCCCCCCCEEECCCCCCCCCEECCEEEEEEEEECCCCCEEEECCHHHHHHCCC
EFIRFSGVVNPRTITGDNGVLSTQVADARIEYTAKGYIDEAQNMGWLQRFFLNVLPF
CEEEECCCCCCCEEECCCCEEEEEECCCEEEEEECCCHHHHHCCHHHHHHHHHHCCC
>Mature Secondary Structure 
TMAATRSGSRIVAFVAHAIVGLAALASGGCAMMPKEPLVQLPTTARAESRPVSAPTGSI
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCC
FASSYAAGNPLFEDRRPRNVGDILTIVITENINASKNSGSNASRAGNSTLSFNAVPRALA
EECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEECHHHHHHH
GLFSSASNADIGGTNTLKASGGSSANNTFNGTITVTVLEVLPNGNLVVSGEKQMAINQGA
HHHHCCCCCCCCCCCEEECCCCCCCCCEECCEEEEEEEEECCCCCEEEECCHHHHHHCCC
EFIRFSGVVNPRTITGDNGVLSTQVADARIEYTAKGYIDEAQNMGWLQRFFLNVLPF
CEEEECCCCCCCEEECCCCEEEEEECCCEEEEEECCCHHHHHCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA