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The map label for this gene is rpfG [H]

Identifier: 94310760

GI number: 94310760

Start: 1978062

End: 1979249

Strand: Reverse

Name: rpfG [H]

Synonym: Rmet_1822

Alternate gene names: 94310760

Gene position: 1979249-1978062 (Counterclockwise)

Preceding gene: 94310762

Following gene: 94310759

Centisome position: 50.39

GC content: 63.38

Gene sequence:

>1188_bases
ATGCTGAGAAGAATCAAGGCGGAACAGCTTCAGGTGGGCATGTTTGTGTCCAGGCTGGGCGGGCCATGGATCAACCATCC
ATTCTGGCGCTCGCGCTTTCTGGTCAGTAGCGACGAACAGATCGAGCAGATCCTGGCGGCCAATGTGCAGGACGTCTGGA
TCGACATCCTGAAGGGGCGCAACCTGCCGATGCAGAGCACGCCGGAAGTTGCCGATTCGGAGGTGGATGCACAGCCCGAG
TCGGGTTTCGAGGACGAACTCGAACATGCGCGCGAGCTGATCAAGTCGGGCCGGGCGGTGATCGGGTCGATTTTCAACGA
CGTGCGGATGGGGCACGCGCTCGAGACCAACGGCGCGCTGCTGCTGGTGGATTCGGCATCGACATCGCTTTCGCGCCATT
CGCAGGCGTTGCTGGCCATGGCACGGCTCAAGGCCAAGGACGACTACACGTACCTGCATTCGTACTCGGTCTGTGCGCTG
ATGATCGCCGTGGGCCGTACGCTGAAACTGCCCGACGGTGAAGTGCGCGAGCTTGGCCTGGCCGGGCTGGTCCACGATAT
CGGCAAGCTGACGCTGCCCGAGTCACTGCTGATGAAGGCGGGGGATCTGTCGCCGGCCGAGTACGAGCAGATGCGGCGGC
ACCCGTCGGCCGGGTACCGCATCCTGAACGAGGCGCGGCTGTATACGAACATTCCGCTCGACGTGTGCGTGCATCACCAT
GAGCGGGTGGACGGCAAGGGCTATCCCTTCGGTCTGTTCGAGAGTGAAATCAGCGTGCACGCCAAGATCGCGGCGATCTG
CGATACCTACGACTCGCTGACGTCGCCGCGGCCCAACCACCTGGCCTGGTCACCGGCGCGTGCGATGGAGTACATCGCGG
TGCGCGTCGACACGCTGTTCGATCGCCGTGTGTTCAAGGCGTTTACACGGACGGTCGGCATCTACCCGCTGGGCACCGTG
CTGCGGCTGCGCTCGGGACGCCTGGCGGTGGTCTGCGGGCAGAACGCGAACGAACCGCTGCGGCCCCGCGTGATGACGTT
CTACTCGGTGTCACAGTCGGCGCCGCTGCCGCATGAGGTTCTCGACCTGACTCAGAGCGAGGATTCCGTCATTGCCTTCG
AGGATGCCCGGCAGTGGGGTTTCACCGACGAGCAACTGATGGCGATGTACGCGCCACACGTGAAATAG

Upstream 100 bases:

>100_bases
TCTGCCGATATAGGCGGCAAATGACGAGGGCCTGACAAGAGCCCAAAGTTCCGGGATGGCGGGGCATCTGCTCCGCCGCA
GTTCATGTGGGGGCAAGGAC

Downstream 100 bases:

>100_bases
ACAGAAAGCGCGTGCGTCGAGCGCGGCGGACGTCGAACGCCAAATGTGGGCGGGGCGGGCAGAAATAGTAGACTTGGCGA
TTGGCAGCCCGTACCGCTTC

Product: metal-dependent phosphohydrolase, HD subdomain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MLRRIKAEQLQVGMFVSRLGGPWINHPFWRSRFLVSSDEQIEQILAANVQDVWIDILKGRNLPMQSTPEVADSEVDAQPE
SGFEDELEHARELIKSGRAVIGSIFNDVRMGHALETNGALLLVDSASTSLSRHSQALLAMARLKAKDDYTYLHSYSVCAL
MIAVGRTLKLPDGEVRELGLAGLVHDIGKLTLPESLLMKAGDLSPAEYEQMRRHPSAGYRILNEARLYTNIPLDVCVHHH
ERVDGKGYPFGLFESEISVHAKIAAICDTYDSLTSPRPNHLAWSPARAMEYIAVRVDTLFDRRVFKAFTRTVGIYPLGTV
LRLRSGRLAVVCGQNANEPLRPRVMTFYSVSQSAPLPHEVLDLTQSEDSVIAFEDARQWGFTDEQLMAMYAPHVK

Sequences:

>Translated_395_residues
MLRRIKAEQLQVGMFVSRLGGPWINHPFWRSRFLVSSDEQIEQILAANVQDVWIDILKGRNLPMQSTPEVADSEVDAQPE
SGFEDELEHARELIKSGRAVIGSIFNDVRMGHALETNGALLLVDSASTSLSRHSQALLAMARLKAKDDYTYLHSYSVCAL
MIAVGRTLKLPDGEVRELGLAGLVHDIGKLTLPESLLMKAGDLSPAEYEQMRRHPSAGYRILNEARLYTNIPLDVCVHHH
ERVDGKGYPFGLFESEISVHAKIAAICDTYDSLTSPRPNHLAWSPARAMEYIAVRVDTLFDRRVFKAFTRTVGIYPLGTV
LRLRSGRLAVVCGQNANEPLRPRVMTFYSVSQSAPLPHEVLDLTQSEDSVIAFEDARQWGFTDEQLMAMYAPHVK
>Mature_395_residues
MLRRIKAEQLQVGMFVSRLGGPWINHPFWRSRFLVSSDEQIEQILAANVQDVWIDILKGRNLPMQSTPEVADSEVDAQPE
SGFEDELEHARELIKSGRAVIGSIFNDVRMGHALETNGALLLVDSASTSLSRHSQALLAMARLKAKDDYTYLHSYSVCAL
MIAVGRTLKLPDGEVRELGLAGLVHDIGKLTLPESLLMKAGDLSPAEYEQMRRHPSAGYRILNEARLYTNIPLDVCVHHH
ERVDGKGYPFGLFESEISVHAKIAAICDTYDSLTSPRPNHLAWSPARAMEYIAVRVDTLFDRRVFKAFTRTVGIYPLGTV
LRLRSGRLAVVCGQNANEPLRPRVMTFYSVSQSAPLPHEVLDLTQSEDSVIAFEDARQWGFTDEQLMAMYAPHVK

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 44207; Mature: 44207

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRRIKAEQLQVGMFVSRLGGPWINHPFWRSRFLVSSDEQIEQILAANVQDVWIDILKGR
CCCCCCHHHHHHHHHHHHHCCCCCCCCHHHCEEECCCHHHHHHHHHCCHHHHHHHHHCCC
NLPMQSTPEVADSEVDAQPESGFEDELEHARELIKSGRAVIGSIFNDVRMGHALETNGAL
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEECCCEE
LLVDSASTSLSRHSQALLAMARLKAKDDYTYLHSYSVCALMIAVGRTLKLPDGEVRELGL
EEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEECCCCHHHHHHH
AGLVHDIGKLTLPESLLMKAGDLSPAEYEQMRRHPSAGYRILNEARLYTNIPLDVCVHHH
HHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHCCHHEECCCHHHHHHHH
ERVDGKGYPFGLFESEISVHAKIAAICDTYDSLTSPRPNHLAWSPARAMEYIAVRVDTLF
HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
DRRVFKAFTRTVGIYPLGTVLRLRSGRLAVVCGQNANEPLRPRVMTFYSVSQSAPLPHEV
HHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCHHH
LDLTQSEDSVIAFEDARQWGFTDEQLMAMYAPHVK
HHCCCCCCCEEEEECCHHCCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MLRRIKAEQLQVGMFVSRLGGPWINHPFWRSRFLVSSDEQIEQILAANVQDVWIDILKGR
CCCCCCHHHHHHHHHHHHHCCCCCCCCHHHCEEECCCHHHHHHHHHCCHHHHHHHHHCCC
NLPMQSTPEVADSEVDAQPESGFEDELEHARELIKSGRAVIGSIFNDVRMGHALETNGAL
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEECCCEE
LLVDSASTSLSRHSQALLAMARLKAKDDYTYLHSYSVCALMIAVGRTLKLPDGEVRELGL
EEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEECCCCHHHHHHH
AGLVHDIGKLTLPESLLMKAGDLSPAEYEQMRRHPSAGYRILNEARLYTNIPLDVCVHHH
HHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHCCHHEECCCHHHHHHHH
ERVDGKGYPFGLFESEISVHAKIAAICDTYDSLTSPRPNHLAWSPARAMEYIAVRVDTLF
HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
DRRVFKAFTRTVGIYPLGTVLRLRSGRLAVVCGQNANEPLRPRVMTFYSVSQSAPLPHEV
HHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCHHH
LDLTQSEDSVIAFEDARQWGFTDEQLMAMYAPHVK
HHCCCCCCCEEEEECCHHCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]