BacMap

Definition	Cupriavidus metallidurans CH34 chromosome, complete genome.
Accession	NC_007973
Length	3,928,089

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The map label for this gene is arp3 [C]

Identifier: 94310762

GI number: 94310762

Start: 1980654

End: 1981334

Strand: Reverse

Name: arp3 [C]

Synonym: Rmet_1824

Alternate gene names: 94310762

Gene position: 1981334-1980654 (Counterclockwise)

Preceding gene: 94310763

Following gene: 94310760

Centisome position: 50.44

GC content: 62.41

Gene sequence:

>681_bases
ATGGCCCTGATCTGCGCGGCTTGTGCGAGTGTGGCCGCTCCGGCCGACGATATGCGCAAGGCCGTCGAGTTCGATGACGC
CAACACCGTGCAGAAGCTGTTGGCGCGTGGCGTGGATCCGAATCTGGTCGACAACCGGGGCGATCCGATGCTGGTGGTGG
CGCTGCGCGAGAAATCGACCAAGGCGGCAACGGCGCTGATCAAGGCCAAGAACATTGACTTTGACAAGACCAATCCGGCG
GGTGAGAACCCGCTGATGATGGCCAGCCTTCAGGGCGAACTGGACATGGTCAAGCTGATGGTCGACGGCATGGAGGCCGA
GGTTAACAAGAAGGGCTGGGCGCCGCTGCACTACGCGGCGACGAATGGGCACAACGATGTCGTCAAGTATCTGGTCGATC
ATGCGGCCTACATCGATGCGGAAAGCCCGAACGGCACCACGCCGCTGATGATGGCTGCGCGCGGCGGGCATATCGATACC
GTCAAGCTGCTGCTCGACGAAGGCGCGGACATGCGCCTGAAGAACCAGCAGAACATGACCGTGATCGACTTTGCCGAGCA
GTACAACCAGAAAGAGATTGCCGACGGCCTCAAGTCGCGCTGGCAGAAGCTGTATGGCGCGGTGCCGCCGCCGGCACCGA
AGCCGAAGCCCTGGACGCCGCCTGCTGGTCAGGCGAAGTAG

Upstream 100 bases:

>100_bases
ACGATCGCAGAACAAACTACAGATAATTTTTTCCGCTTATTCAAGCACATAGACAGGAATTCTCATGCTTGACTTTAAGA
TCAGACGCGGGGTCGCCGCA

Downstream 100 bases:

>100_bases
TCAGGCTGTCAGGTACGCAGTCGTTTCCAGACGCCGCCCATCCGGGCGGCGTTTGCATTACGGGAATTCGCGCTCGGTGA
TCGTGACCGACCGCGACTTT

Product: ankyrin repeat-containing protein (ANK)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MALICAACASVAAPADDMRKAVEFDDANTVQKLLARGVDPNLVDNRGDPMLVVALREKSTKAATALIKAKNIDFDKTNPA
GENPLMMASLQGELDMVKLMVDGMEAEVNKKGWAPLHYAATNGHNDVVKYLVDHAAYIDAESPNGTTPLMMAARGGHIDT
VKLLLDEGADMRLKNQQNMTVIDFAEQYNQKEIADGLKSRWQKLYGAVPPPAPKPKPWTPPAGQAK

Sequences:

>Translated_226_residues
MALICAACASVAAPADDMRKAVEFDDANTVQKLLARGVDPNLVDNRGDPMLVVALREKSTKAATALIKAKNIDFDKTNPA
GENPLMMASLQGELDMVKLMVDGMEAEVNKKGWAPLHYAATNGHNDVVKYLVDHAAYIDAESPNGTTPLMMAARGGHIDT
VKLLLDEGADMRLKNQQNMTVIDFAEQYNQKEIADGLKSRWQKLYGAVPPPAPKPKPWTPPAGQAK
>Mature_225_residues
ALICAACASVAAPADDMRKAVEFDDANTVQKLLARGVDPNLVDNRGDPMLVVALREKSTKAATALIKAKNIDFDKTNPAG
ENPLMMASLQGELDMVKLMVDGMEAEVNKKGWAPLHYAATNGHNDVVKYLVDHAAYIDAESPNGTTPLMMAARGGHIDTV
KLLLDEGADMRLKNQQNMTVIDFAEQYNQKEIADGLKSRWQKLYGAVPPPAPKPKPWTPPAGQAK

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 7 ANK repeats [H]

Homologues:

Organism=Homo sapiens, GI38569428, Length=145, Percent_Identity=39.3103448275862, Blast_Score=89, Evalue=2e-18,
Organism=Homo sapiens, GI38569426, Length=145, Percent_Identity=39.3103448275862, Blast_Score=89, Evalue=2e-18,
Organism=Homo sapiens, GI70780353, Length=193, Percent_Identity=32.6424870466321, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI70780359, Length=193, Percent_Identity=32.6424870466321, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI70780355, Length=193, Percent_Identity=32.6424870466321, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI215598574, Length=193, Percent_Identity=32.6424870466321, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI70780357, Length=193, Percent_Identity=32.6424870466321, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI46519154, Length=155, Percent_Identity=35.4838709677419, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI46519151, Length=155, Percent_Identity=35.4838709677419, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI46519147, Length=163, Percent_Identity=34.3558282208589, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI37620163, Length=163, Percent_Identity=34.3558282208589, Blast_Score=82, Evalue=3e-16,
Organism=Homo sapiens, GI148596917, Length=239, Percent_Identity=25.5230125523013, Blast_Score=81, Evalue=6e-16,
Organism=Homo sapiens, GI62988328, Length=194, Percent_Identity=30.9278350515464, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI268607595, Length=194, Percent_Identity=30.9278350515464, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI30425444, Length=185, Percent_Identity=27.5675675675676, Blast_Score=79, Evalue=2e-15,
Organism=Homo sapiens, GI225543463, Length=155, Percent_Identity=32.258064516129, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI41327754, Length=185, Percent_Identity=29.7297297297297, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI188595682, Length=158, Percent_Identity=31.6455696202532, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI52426737, Length=158, Percent_Identity=31.6455696202532, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI38683816, Length=164, Percent_Identity=31.7073170731707, Blast_Score=75, Evalue=3e-14,
Organism=Homo sapiens, GI225543461, Length=155, Percent_Identity=32.258064516129, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI38683807, Length=164, Percent_Identity=31.7073170731707, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI68131557, Length=179, Percent_Identity=34.0782122905028, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI32967601, Length=169, Percent_Identity=27.810650887574, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI52426735, Length=153, Percent_Identity=32.0261437908497, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI17864094, Length=159, Percent_Identity=30.8176100628931, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI304361760, Length=139, Percent_Identity=30.2158273381295, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI304361757, Length=139, Percent_Identity=30.2158273381295, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI157266328, Length=120, Percent_Identity=35, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI55741641, Length=164, Percent_Identity=31.0975609756098, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI24233530, Length=206, Percent_Identity=30.5825242718447, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI116063534, Length=160, Percent_Identity=33.75, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI55770876, Length=211, Percent_Identity=27.4881516587678, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI121582655, Length=183, Percent_Identity=28.9617486338798, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI157739945, Length=107, Percent_Identity=34.5794392523364, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI256574792, Length=177, Percent_Identity=28.2485875706215, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI134948605, Length=132, Percent_Identity=35.6060606060606, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI134948558, Length=132, Percent_Identity=35.6060606060606, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI42734375, Length=101, Percent_Identity=34.6534653465347, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI156142184, Length=115, Percent_Identity=31.304347826087, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI71274109, Length=179, Percent_Identity=28.4916201117318, Blast_Score=68, Evalue=5e-12,
Organism=Homo sapiens, GI56550047, Length=185, Percent_Identity=28.1081081081081, Blast_Score=68, Evalue=5e-12,
Organism=Homo sapiens, GI87239981, Length=201, Percent_Identity=31.3432835820896, Blast_Score=68, Evalue=6e-12,
Organism=Homo sapiens, GI59850762, Length=185, Percent_Identity=28.1081081081081, Blast_Score=68, Evalue=6e-12,
Organism=Homo sapiens, GI30089994, Length=163, Percent_Identity=29.4478527607362, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI38176283, Length=163, Percent_Identity=29.4478527607362, Blast_Score=67, Evalue=9e-12,
Organism=Homo sapiens, GI12746412, Length=174, Percent_Identity=28.1609195402299, Blast_Score=67, Evalue=9e-12,
Organism=Homo sapiens, GI70995267, Length=158, Percent_Identity=29.746835443038, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI116875852, Length=126, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI187608777, Length=129, Percent_Identity=31.0077519379845, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI13376842, Length=199, Percent_Identity=31.1557788944724, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI224465233, Length=122, Percent_Identity=36.0655737704918, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI19924156, Length=152, Percent_Identity=28.2894736842105, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI32483404, Length=114, Percent_Identity=35.0877192982456, Blast_Score=65, Evalue=7e-11,
Organism=Homo sapiens, GI8051599, Length=114, Percent_Identity=35.0877192982456, Blast_Score=65, Evalue=7e-11,
Organism=Homo sapiens, GI8051597, Length=114, Percent_Identity=35.0877192982456, Blast_Score=65, Evalue=7e-11,
Organism=Homo sapiens, GI4506499, Length=142, Percent_Identity=29.5774647887324, Blast_Score=65, Evalue=7e-11,
Organism=Homo sapiens, GI157504499, Length=163, Percent_Identity=29.4478527607362, Blast_Score=64, Evalue=8e-11,
Organism=Homo sapiens, GI8051595, Length=114, Percent_Identity=35.0877192982456, Blast_Score=64, Evalue=9e-11,
Organism=Homo sapiens, GI8051593, Length=114, Percent_Identity=35.0877192982456, Blast_Score=64, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI212646035, Length=162, Percent_Identity=32.7160493827161, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI212646031, Length=162, Percent_Identity=32.7160493827161, Blast_Score=77, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI212646033, Length=162, Percent_Identity=32.7160493827161, Blast_Score=77, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI71981389, Length=164, Percent_Identity=32.3170731707317, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI25145251, Length=164, Percent_Identity=32.3170731707317, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17542700, Length=164, Percent_Identity=32.3170731707317, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71981414, Length=192, Percent_Identity=30.2083333333333, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71981411, Length=192, Percent_Identity=30.2083333333333, Blast_Score=73, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI212645194, Length=112, Percent_Identity=33.0357142857143, Blast_Score=67, Evalue=5e-12,
Organism=Drosophila melanogaster, GI281359521, Length=171, Percent_Identity=32.1637426900585, Blast_Score=94, Evalue=8e-20,
Organism=Drosophila melanogaster, GI281359519, Length=171, Percent_Identity=32.1637426900585, Blast_Score=94, Evalue=8e-20,
Organism=Drosophila melanogaster, GI28558752, Length=171, Percent_Identity=32.1637426900585, Blast_Score=94, Evalue=8e-20,
Organism=Drosophila melanogaster, GI28558750, Length=171, Percent_Identity=32.1637426900585, Blast_Score=94, Evalue=8e-20,
Organism=Drosophila melanogaster, GI28558756, Length=171, Percent_Identity=32.1637426900585, Blast_Score=94, Evalue=8e-20,
Organism=Drosophila melanogaster, GI28558754, Length=171, Percent_Identity=32.1637426900585, Blast_Score=94, Evalue=8e-20,
Organism=Drosophila melanogaster, GI28571867, Length=155, Percent_Identity=35.4838709677419, Blast_Score=84, Evalue=7e-17,
Organism=Drosophila melanogaster, GI28571865, Length=155, Percent_Identity=35.4838709677419, Blast_Score=84, Evalue=7e-17,
Organism=Drosophila melanogaster, GI161082085, Length=125, Percent_Identity=36.8, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI161082089, Length=125, Percent_Identity=36, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI161082099, Length=125, Percent_Identity=36.8, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI161082110, Length=169, Percent_Identity=30.1775147928994, Blast_Score=74, Evalue=6e-14,
Organism=Drosophila melanogaster, GI161082096, Length=169, Percent_Identity=30.1775147928994, Blast_Score=74, Evalue=6e-14,
Organism=Drosophila melanogaster, GI161082081, Length=169, Percent_Identity=30.1775147928994, Blast_Score=74, Evalue=7e-14,
Organism=Drosophila melanogaster, GI161082106, Length=169, Percent_Identity=30.1775147928994, Blast_Score=74, Evalue=8e-14,
Organism=Drosophila melanogaster, GI161082092, Length=125, Percent_Identity=36, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI24660357, Length=137, Percent_Identity=32.8467153284672, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI45552223, Length=130, Percent_Identity=33.8461538461538, Blast_Score=71, Evalue=5e-13,
Organism=Drosophila melanogaster, GI221472807, Length=130, Percent_Identity=33.8461538461538, Blast_Score=71, Evalue=5e-13,
Organism=Drosophila melanogaster, GI17998549, Length=130, Percent_Identity=33.8461538461538, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24581260, Length=152, Percent_Identity=29.6052631578947, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24581258, Length=152, Percent_Identity=29.6052631578947, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI20129611, Length=151, Percent_Identity=31.7880794701987, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI281363919, Length=142, Percent_Identity=29.5774647887324, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI21356741, Length=143, Percent_Identity=30.0699300699301, Blast_Score=64, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683 [H]

Pfam domain/function: PF00023 Ank [H]

EC number: NA

Molecular weight: Translated: 24464; Mature: 24333

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALICAACASVAAPADDMRKAVEFDDANTVQKLLARGVDPNLVDNRGDPMLVVALREKST
CHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCH
KAATALIKAKNIDFDKTNPAGENPLMMASLQGELDMVKLMVDGMEAEVNKKGWAPLHYAA
HHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCHHHHCCCCCCCCEEEEE
TNGHNDVVKYLVDHAAYIDAESPNGTTPLMMAARGGHIDTVKLLLDEGADMRLKNQQNMT
CCCCHHHHHHHHHHHHEEECCCCCCCCCEEEEECCCCHHHHHEEECCCCCEEECCCCCCE
VIDFAEQYNQKEIADGLKSRWQKLYGAVPPPAPKPKPWTPPAGQAK
EEEHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ALICAACASVAAPADDMRKAVEFDDANTVQKLLARGVDPNLVDNRGDPMLVVALREKST
HHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCH
KAATALIKAKNIDFDKTNPAGENPLMMASLQGELDMVKLMVDGMEAEVNKKGWAPLHYAA
HHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCHHHHCCCCCCCCEEEEE
TNGHNDVVKYLVDHAAYIDAESPNGTTPLMMAARGGHIDTVKLLLDEGADMRLKNQQNMT
CCCCHHHHHHHHHHHHEEECCCCCCCCCEEEEECCCCHHHHHEEECCCCCEEECCCCCCE
VIDFAEQYNQKEIADGLKSRWQKLYGAVPPPAPKPKPWTPPAGQAK
EEEHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12125824 [H]