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The map label for this gene is 93007288

Identifier: 93007288

GI number: 93007288

Start: 3044182

End: 3045315

Strand: Reverse

Name: 93007288

Synonym: Pcryo_2464

Alternate gene names: NA

Gene position: 3045315-3044182 (Counterclockwise)

Preceding gene: 93007289

Following gene: 93007287

Centisome position: 99.52

GC content: 44.62

Gene sequence:

>1134_bases
ATGGCGCTACCAGCGTTACATATTGTGGATATAACCATGAAGATGAGCTTAAAAAATATCGTAAAAGCGCTATTGGTGAC
AACCTTTAGTGGTGCAATGCTGATGAGCACCGCCCACGCTAATAATCCCCCGCCGACCATTAAAGCGGATGCGCCCAATC
GCTATATTGTCAAAAAAGGCGATACTTTGTGGGATATTTCAGGACGTTATCTGGATAGTCCATGGCGCTGGAAAGAGATT
TGGGCGACCAATAAGCAAATCAAAAACCCTCATCTTATTTATCCTAACGACGTTTTGATTTTATGCGTCATACAAGGTAA
AACTCTGATCGGCGTTGATACGGGCGAGGGTTGTGCAGGGATTGAAAAACAGTTAACAGGCAATGTGGTGACTACGACAG
TCGCTGTTACCTCTGCTGTCAATAGCATTCCGCCGATTCCTTGGTCTGCCATTCAGCATTGGCTTGATAAGACACTAATT
GTTAATCCGCAAGATTTTAATACCACGCCTTATATTCTAGCCTCTAAAAAAGGTAATTTAATTACGGCTAGTGGTGACAA
GGTTTATGCCAAAGGCGTGCCACTGCTTGTAGGTCAACGTTATGGTATCTACCGTGAAGGCGAGATGTATATCGAGCCAA
AAACGCAAAAAGTCATTGGTTTAGAAGTCACACAAGTGGCAACGGGATTGGTTACGTCTACGGCAACCAATGGCGTGACG
AGCTTGCAGCTTATCGACAGTTACGGTAAAGAAGTTCGTGAAGGCGATCGAGTATTTGTTGAATTAGACAATGCTATCCC
ACCAGTCTTTTATCCGACGCCTGCAACCGTTAATCGCGGTGGTATGATTGTTCGTGTGATGGATTCTATCAGCTCAGCTG
CCAAAGGTAGTGTGGTGGCAATTAACTTGGGTCGCATACATGGTGCGAAGCCGGGTGATGTGTTGACTGTTTATCAAAAA
GGCGCAGTCATACGTGATATTAAGGACAATGATACACCGGTACGTTTGCCAAGTGAGCCAAGCGGTATGGTGATGGTGTT
CAATAGTTTTGACAATATCAGTTATGCTTATGTGCTTGAGTCTGAGCTGCCACTGAGCATTGGTGATCAGCTGTTGCCAC
CTCCTTATTTATAA

Upstream 100 bases:

>100_bases
TAGACGTTATGATAAGGTGCTATAAGTCTTTATTTTTCCTTAATTCTTTGTTGTTATTTTTAAACAAAGGTAAAATAAGC
CAACTTAAGTAGCCTTTATT

Downstream 100 bases:

>100_bases
CCCTGCCTCAAGTTTTAGCGAGCAGATCTTAGATAAGCCTATAAGAGTCATACGATGATGACGGTAGCCACTTTTACTTT
ATCAGATGAGCAGCGTGCAA

Product: peptidoglycan-binding LysM

Products: NA

Alternate protein names: LysM Domain Protein; Cell Wall Degradation; LysM Motif-Containing Protein; Protein Containing LysM Domain; Signal Peptide Protein; LysM Family Cell Wall Degradation Protein; Lysin Domain-Containing Protein; Signal Peptide Protein LysM Domain Protein; Secreted Protein

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MALPALHIVDITMKMSLKNIVKALLVTTFSGAMLMSTAHANNPPPTIKADAPNRYIVKKGDTLWDISGRYLDSPWRWKEI
WATNKQIKNPHLIYPNDVLILCVIQGKTLIGVDTGEGCAGIEKQLTGNVVTTTVAVTSAVNSIPPIPWSAIQHWLDKTLI
VNPQDFNTTPYILASKKGNLITASGDKVYAKGVPLLVGQRYGIYREGEMYIEPKTQKVIGLEVTQVATGLVTSTATNGVT
SLQLIDSYGKEVREGDRVFVELDNAIPPVFYPTPATVNRGGMIVRVMDSISSAAKGSVVAINLGRIHGAKPGDVLTVYQK
GAVIRDIKDNDTPVRLPSEPSGMVMVFNSFDNISYAYVLESELPLSIGDQLLPPPYL

Sequences:

>Translated_377_residues
MALPALHIVDITMKMSLKNIVKALLVTTFSGAMLMSTAHANNPPPTIKADAPNRYIVKKGDTLWDISGRYLDSPWRWKEI
WATNKQIKNPHLIYPNDVLILCVIQGKTLIGVDTGEGCAGIEKQLTGNVVTTTVAVTSAVNSIPPIPWSAIQHWLDKTLI
VNPQDFNTTPYILASKKGNLITASGDKVYAKGVPLLVGQRYGIYREGEMYIEPKTQKVIGLEVTQVATGLVTSTATNGVT
SLQLIDSYGKEVREGDRVFVELDNAIPPVFYPTPATVNRGGMIVRVMDSISSAAKGSVVAINLGRIHGAKPGDVLTVYQK
GAVIRDIKDNDTPVRLPSEPSGMVMVFNSFDNISYAYVLESELPLSIGDQLLPPPYL
>Mature_376_residues
ALPALHIVDITMKMSLKNIVKALLVTTFSGAMLMSTAHANNPPPTIKADAPNRYIVKKGDTLWDISGRYLDSPWRWKEIW
ATNKQIKNPHLIYPNDVLILCVIQGKTLIGVDTGEGCAGIEKQLTGNVVTTTVAVTSAVNSIPPIPWSAIQHWLDKTLIV
NPQDFNTTPYILASKKGNLITASGDKVYAKGVPLLVGQRYGIYREGEMYIEPKTQKVIGLEVTQVATGLVTSTATNGVTS
LQLIDSYGKEVREGDRVFVELDNAIPPVFYPTPATVNRGGMIVRVMDSISSAAKGSVVAINLGRIHGAKPGDVLTVYQKG
AVIRDIKDNDTPVRLPSEPSGMVMVFNSFDNISYAYVLESELPLSIGDQLLPPPYL

Specific function: Unknown

COG id: COG1652

COG function: function code S; Uncharacterized protein containing LysM domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40970; Mature: 40839

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALPALHIVDITMKMSLKNIVKALLVTTFSGAMLMSTAHANNPPPTIKADAPNRYIVKKG
CCCCCEEEEEEEEHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEECCCCCEEEEECC
DTLWDISGRYLDSPWRWKEIWATNKQIKNPHLIYPNDVLILCVIQGKTLIGVDTGEGCAG
CEEEECCCCEECCCCCCHHHHCCCCCCCCCEEECCCCEEEEEEECCCEEEEEECCCCCCC
IEKQLTGNVVTTTVAVTSAVNSIPPIPWSAIQHWLDKTLIVNPQDFNTTPYILASKKGNL
CHHHHCCCEEEEEEEHHHHHHCCCCCCHHHHHHHHCCEEEECCCCCCCCCEEEEECCCCE
ITASGDKVYAKGVPLLVGQRYGIYREGEMYIEPKTQKVIGLEVTQVATGLVTSTATNGVT
EEECCCEEEECCCCEEEECCCCEEECCEEEECCCCCEEEEEEHHHHHHHHHEECCCCCCE
SLQLIDSYGKEVREGDRVFVELDNAIPPVFYPTPATVNRGGMIVRVMDSISSAAKGSVVA
EEHHHHHHHHHHHCCCEEEEEECCCCCCEEECCCCEECCCCEEEEEEHHHHHHCCCCEEE
INLGRIHGAKPGDVLTVYQKGAVIRDIKDNDTPVRLPSEPSGMVMVFNSFDNISYAYVLE
EEECCCCCCCCCCEEEEEECCCEEEECCCCCCCEECCCCCCCEEEEEECCCCCEEEEEEE
SELPLSIGDQLLPPPYL
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ALPALHIVDITMKMSLKNIVKALLVTTFSGAMLMSTAHANNPPPTIKADAPNRYIVKKG
CCCCEEEEEEEEHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEECCCCCEEEEECC
DTLWDISGRYLDSPWRWKEIWATNKQIKNPHLIYPNDVLILCVIQGKTLIGVDTGEGCAG
CEEEECCCCEECCCCCCHHHHCCCCCCCCCEEECCCCEEEEEEECCCEEEEEECCCCCCC
IEKQLTGNVVTTTVAVTSAVNSIPPIPWSAIQHWLDKTLIVNPQDFNTTPYILASKKGNL
CHHHHCCCEEEEEEEHHHHHHCCCCCCHHHHHHHHCCEEEECCCCCCCCCEEEEECCCCE
ITASGDKVYAKGVPLLVGQRYGIYREGEMYIEPKTQKVIGLEVTQVATGLVTSTATNGVT
EEECCCEEEECCCCEEEECCCCEEECCEEEECCCCCEEEEEEHHHHHHHHHEECCCCCCE
SLQLIDSYGKEVREGDRVFVELDNAIPPVFYPTPATVNRGGMIVRVMDSISSAAKGSVVA
EEHHHHHHHHHHHCCCEEEEEECCCCCCEEECCCCEECCCCEEEEEEHHHHHHCCCCEEE
INLGRIHGAKPGDVLTVYQKGAVIRDIKDNDTPVRLPSEPSGMVMVFNSFDNISYAYVLE
EEECCCCCCCCCCEEEEEECCCEEEECCCCCCCEECCCCCCCEEEEEECCCCCEEEEEEE
SELPLSIGDQLLPPPYL
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA