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The map label for this gene is scpA [H]

Identifier: 93006575

GI number: 93006575

Start: 2167134

End: 2168000

Strand: Direct

Name: scpA [H]

Synonym: Pcryo_1751

Alternate gene names: 93006575

Gene position: 2167134-2168000 (Clockwise)

Preceding gene: 93006574

Following gene: 93006576

Centisome position: 70.82

GC content: 42.79

Gene sequence:

>867_bases
ATGCAAAGTAAGCGATTAATTGAGTCTAGCGCAGAGATTCATGATATGTCTCTGCGTATCTATCAGACGCCTATACAGCA
TTTGCCAGAAGATTTGTATGTGCCGCCACAAGCGTTTGCTATTTGGCTTGAGCAGTTTGCAGGGCCATTAGACTTTTTAT
TGTATTTGGTTAAGAAAAACAACGTTGATTTGACACGAATGCCGATATTACCGATTACAGAGCAGTATTTGGCTTATATC
AGTGAATTGGACACCAATCATTTTGAGTTGGCCGGTGACTATCTACTAATGGCATCAACCTTGATTGCGATCAAGACTGA
GTTGTTACTTCCTAAACCAGAAAAGCCTACCGATGAGCGCGATCCAAAAGCTGAACTGATTGAGCGTCTTGAAGAATACG
CCCAAGTCAAAGCTGCCAGTCAACGTTTAGACAATTTAATTCGACTTGAGCGCGATGTGTTTTTGGCGATGGTCAGTATG
CCAAGCCAAGACATTATGAATGCTGAGCTGCCAAGCTATTCACCTACTCTATTGATTGATAGCTTGTTTAAGATGCAGCT
GCAACCCGACTATCAGATGCATAGCATCAAGGTCGATGCTGTGCCACTTGCTGATCGTATCGCTAGTATCAGTCGCCAAC
TGAGTATGGACGGCGCGCGCTCTTTTTATGAACTATTAGATAAAACTCAAGGCAAAATAGGTGTGGTTGTCAGCTTTGTC
GCGGTGCTTGAATTAATCAAGCGCCAACTGATTGGTGTGGTTGCTAATAGTACGGACAATCATGTTAACACAGCAAATAA
CGCTGATATCAGCCTGCCCACTCATAACGATTTACTCGGAAAATTGACGTTAGAATGGTTAGCATAA

Upstream 100 bases:

>100_bases
ATAGTCGTAAGCAACTAGATAAGACCCGCCGCGCTATTGGTATCCGTCCACTTGCCAAACTTAAATAAATTATTATTTAC
GATGACCATAGATTGCTATC

Downstream 100 bases:

>100_bases
TCCTAACTGGCTTTATAGTAAGTCTAAAATCATTAAACTGAAGAAGATTATATTGAAATGGCAGATATAGACGACCCTAA
AGACCACCTACTATCTATTG

Product: chromosome segregation and condensation protein ScpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MQSKRLIESSAEIHDMSLRIYQTPIQHLPEDLYVPPQAFAIWLEQFAGPLDFLLYLVKKNNVDLTRMPILPITEQYLAYI
SELDTNHFELAGDYLLMASTLIAIKTELLLPKPEKPTDERDPKAELIERLEEYAQVKAASQRLDNLIRLERDVFLAMVSM
PSQDIMNAELPSYSPTLLIDSLFKMQLQPDYQMHSIKVDAVPLADRIASISRQLSMDGARSFYELLDKTQGKIGVVVSFV
AVLELIKRQLIGVVANSTDNHVNTANNADISLPTHNDLLGKLTLEWLA

Sequences:

>Translated_288_residues
MQSKRLIESSAEIHDMSLRIYQTPIQHLPEDLYVPPQAFAIWLEQFAGPLDFLLYLVKKNNVDLTRMPILPITEQYLAYI
SELDTNHFELAGDYLLMASTLIAIKTELLLPKPEKPTDERDPKAELIERLEEYAQVKAASQRLDNLIRLERDVFLAMVSM
PSQDIMNAELPSYSPTLLIDSLFKMQLQPDYQMHSIKVDAVPLADRIASISRQLSMDGARSFYELLDKTQGKIGVVVSFV
AVLELIKRQLIGVVANSTDNHVNTANNADISLPTHNDLLGKLTLEWLA
>Mature_288_residues
MQSKRLIESSAEIHDMSLRIYQTPIQHLPEDLYVPPQAFAIWLEQFAGPLDFLLYLVKKNNVDLTRMPILPITEQYLAYI
SELDTNHFELAGDYLLMASTLIAIKTELLLPKPEKPTDERDPKAELIERLEEYAQVKAASQRLDNLIRLERDVFLAMVSM
PSQDIMNAELPSYSPTLLIDSLFKMQLQPDYQMHSIKVDAVPLADRIASISRQLSMDGARSFYELLDKTQGKIGVVVSFV
AVLELIKRQLIGVVANSTDNHVNTANNADISLPTHNDLLGKLTLEWLA

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 32618; Mature: 32618

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSKRLIESSAEIHDMSLRIYQTPIQHLPEDLYVPPQAFAIWLEQFAGPLDFLLYLVKKN
CCCCHHHHHCCHHHHHHHHHHHCHHHHCCHHCCCCHHHHHHHHHHHCCHHHHHHHHHHCC
NVDLTRMPILPITEQYLAYISELDTNHFELAGDYLLMASTLIAIKTELLLPKPEKPTDER
CCCEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
DPKAELIERLEEYAQVKAASQRLDNLIRLERDVFLAMVSMPSQDIMNAELPSYSPTLLID
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHH
SLFKMQLQPDYQMHSIKVDAVPLADRIASISRQLSMDGARSFYELLDKTQGKIGVVVSFV
HHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
AVLELIKRQLIGVVANSTDNHVNTANNADISLPTHNDLLGKLTLEWLA
HHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MQSKRLIESSAEIHDMSLRIYQTPIQHLPEDLYVPPQAFAIWLEQFAGPLDFLLYLVKKN
CCCCHHHHHCCHHHHHHHHHHHCHHHHCCHHCCCCHHHHHHHHHHHCCHHHHHHHHHHCC
NVDLTRMPILPITEQYLAYISELDTNHFELAGDYLLMASTLIAIKTELLLPKPEKPTDER
CCCEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
DPKAELIERLEEYAQVKAASQRLDNLIRLERDVFLAMVSMPSQDIMNAELPSYSPTLLID
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHH
SLFKMQLQPDYQMHSIKVDAVPLADRIASISRQLSMDGARSFYELLDKTQGKIGVVVSFV
HHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
AVLELIKRQLIGVVANSTDNHVNTANNADISLPTHNDLLGKLTLEWLA
HHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]