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The map label for this gene is scpB [H]

Identifier: 93006576

GI number: 93006576

Start: 2168058

End: 2168618

Strand: Direct

Name: scpB [H]

Synonym: Pcryo_1752

Alternate gene names: 93006576

Gene position: 2168058-2168618 (Clockwise)

Preceding gene: 93006575

Following gene: 93006580

Centisome position: 70.85

GC content: 41.89

Gene sequence:

>561_bases
ATGGCAGATATAGACGACCCTAAAGACCACCTACTATCTATTGAAGACATAAGTAAACAGATTGAAGTTTTACTTCATGC
TTCAGAAGCACCCTTAACTACTAATCACTTAAAAAAACACTTATTCTTAACGACTAATAAGTTAGAGCAGGCACTAGAAC
TGCTAAAGCAACGCTTAAATCTTGGCGTATTAAGTTTGCATCATACTGCCAGTGGTTATCGTTTGCAAATCGCTGATAGC
CATAGCGCCTTAATACAGAATGTCTTTCCCCAGCGTCAAGAACGTCTCAGCCAAGCCTTGCTAGAGACTTTGAGCGTGAT
TGCTTACAAGCAACCGGTGACACGTAGCGATATAGAACATGTGCGCGGCGTGACGCTATCGAGCAATATATTGCGTCAAT
TGTTTGATAAAGGCTGGATTGAAGAAAATGGTTACAAAGATACTTTAGGGCGTCCGGCATTACTGCATACTACGTCTCAA
TTCTTAGATGCTTTTGGACTGAGCCATTTAGATGAGCTACCGCCCATGCCAGAGATAGACAGTATCAGAGCATCCTCTTA
A

Upstream 100 bases:

>100_bases
TAACGATTTACTCGGAAAATTGACGTTAGAATGGTTAGCATAATCCTAACTGGCTTTATAGTAAGTCTAAAATCATTAAA
CTGAAGAAGATTATATTGAA

Downstream 100 bases:

>100_bases
ATAAATCCGATAAAATACTCTTGCTCAATAAAAAAGGACACGCCTATTAGGTATGTCCTTTTTTATTATTCTAATCAGCT
AGCTTAATGAATAAAATGCT

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MADIDDPKDHLLSIEDISKQIEVLLHASEAPLTTNHLKKHLFLTTNKLEQALELLKQRLNLGVLSLHHTASGYRLQIADS
HSALIQNVFPQRQERLSQALLETLSVIAYKQPVTRSDIEHVRGVTLSSNILRQLFDKGWIEENGYKDTLGRPALLHTTSQ
FLDAFGLSHLDELPPMPEIDSIRASS

Sequences:

>Translated_186_residues
MADIDDPKDHLLSIEDISKQIEVLLHASEAPLTTNHLKKHLFLTTNKLEQALELLKQRLNLGVLSLHHTASGYRLQIADS
HSALIQNVFPQRQERLSQALLETLSVIAYKQPVTRSDIEHVRGVTLSSNILRQLFDKGWIEENGYKDTLGRPALLHTTSQ
FLDAFGLSHLDELPPMPEIDSIRASS
>Mature_185_residues
ADIDDPKDHLLSIEDISKQIEVLLHASEAPLTTNHLKKHLFLTTNKLEQALELLKQRLNLGVLSLHHTASGYRLQIADSH
SALIQNVFPQRQERLSQALLETLSVIAYKQPVTRSDIEHVRGVTLSSNILRQLFDKGWIEENGYKDTLGRPALLHTTSQF
LDAFGLSHLDELPPMPEIDSIRASS

Specific function: May participate in chromosomal partitioning during cell division (Potential) [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 20942; Mature: 20811

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADIDDPKDHLLSIEDISKQIEVLLHASEAPLTTNHLKKHLFLTTNKLEQALELLKQRLN
CCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
LGVLSLHHTASGYRLQIADSHSALIQNVFPQRQERLSQALLETLSVIAYKQPVTRSDIEH
CCHHEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
VRGVTLSSNILRQLFDKGWIEENGYKDTLGRPALLHTTSQFLDAFGLSHLDELPPMPEID
HCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SIRASS
CCCCCC
>Mature Secondary Structure 
ADIDDPKDHLLSIEDISKQIEVLLHASEAPLTTNHLKKHLFLTTNKLEQALELLKQRLN
CCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
LGVLSLHHTASGYRLQIADSHSALIQNVFPQRQERLSQALLETLSVIAYKQPVTRSDIEH
CCHHEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
VRGVTLSSNILRQLFDKGWIEENGYKDTLGRPALLHTTSQFLDAFGLSHLDELPPMPEID
HCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SIRASS
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]