Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
---|---|
Accession | NC_007969 |
Length | 3,059,876 |
Click here to switch to the map view.
The map label for this gene is 93006438
Identifier: 93006438
GI number: 93006438
Start: 1986617
End: 1987513
Strand: Direct
Name: 93006438
Synonym: Pcryo_1614
Alternate gene names: NA
Gene position: 1986617-1987513 (Clockwise)
Preceding gene: 93006429
Following gene: 93006439
Centisome position: 64.92
GC content: 41.47
Gene sequence:
>897_bases ATGTCAATGTCAATCGCTGTTAATGAGCAAAAGCAAATCGTCAATGTTAAGCAAGTCGAGCGAGGGCTGGCTTGTATGTG TTTTTGCTTTGAATGTGGTGAGCCTGTAGTGGCTCGTAAGGGTGACAAGAATGAGCATCATTTTGCGCATCTTAACAATA AAGAAAGCTGCACTATTCACCCTGAAAGCATCCTACACAAGTTTGCTAAGCAAGTCATTATGCAAGAGAGGTATTTAACG CTACCATCCCTACCTGATGATGAAAATAGCGAGGATAAAACTTGGGAGTTTGACCACCTAATCGAAGAGCAAGCTGTTAG CTGTATTCGACCGGATATAGTCGCAACGGTAGACGGGGAAATGATGTTTATTGAAGTTGCTGTGACTTCTTTCATCGATA CTGATAAATCAGATTTTATTAAGCAATTGGGTATCAAGACCGTTGAAATCGATTTGAGGGAAATCATCGCACAAGGTATT GAGTTGCCGAGTGAGGAAGCAAAGGTTCATATTTTAGACTGTGCCAGTAATAAACGGTGGATATTCCCAGCACCGAAATC TTTAACAATACCAGTAGCCCCTACACCATTACCTGAGCCTCTCTATAATTGCCAGAGCAGCACTGATGAGAATAGCAATG GAAGCTTTGACAAAGGCTATACGATCTATCGCTTTACCATCAATCATGCTTGGGTCGACGTCAGAGTCTTTAATTCAGGC ATGGTATCTATTAAGTGTGTGACCTACAACCATGATGTTATTGAAATACTAAAGCAATGGCGTAACGAAGGCGGTGGTCA GTACAATCAAAAATATAAGTCATGGAATTACTTCAAACCATTTTCAGACACCGTCTTTCAGCGACTGCAAGAAATGGACA TGACCCCTACTGCTTAA
Upstream 100 bases:
>100_bases GATTAAGACCCTATTATACCCCCAATAGCAGTCTGTTTTAGAGGCAGAATTCTTCTCATAATTACCTCACTCTTAACCAA CTAACAAGAGGATGGTAACT
Downstream 100 bases:
>100_bases ATATGATTCTATTTGATAATACGGAGAATAAAACTATGACACTCACTACTATGCTACTAATTACAATACTGCTGATATTA GCCATGCTTGTATGGGCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MSMSIAVNEQKQIVNVKQVERGLACMCFCFECGEPVVARKGDKNEHHFAHLNNKESCTIHPESILHKFAKQVIMQERYLT LPSLPDDENSEDKTWEFDHLIEEQAVSCIRPDIVATVDGEMMFIEVAVTSFIDTDKSDFIKQLGIKTVEIDLREIIAQGI ELPSEEAKVHILDCASNKRWIFPAPKSLTIPVAPTPLPEPLYNCQSSTDENSNGSFDKGYTIYRFTINHAWVDVRVFNSG MVSIKCVTYNHDVIEILKQWRNEGGGQYNQKYKSWNYFKPFSDTVFQRLQEMDMTPTA
Sequences:
>Translated_298_residues MSMSIAVNEQKQIVNVKQVERGLACMCFCFECGEPVVARKGDKNEHHFAHLNNKESCTIHPESILHKFAKQVIMQERYLT LPSLPDDENSEDKTWEFDHLIEEQAVSCIRPDIVATVDGEMMFIEVAVTSFIDTDKSDFIKQLGIKTVEIDLREIIAQGI ELPSEEAKVHILDCASNKRWIFPAPKSLTIPVAPTPLPEPLYNCQSSTDENSNGSFDKGYTIYRFTINHAWVDVRVFNSG MVSIKCVTYNHDVIEILKQWRNEGGGQYNQKYKSWNYFKPFSDTVFQRLQEMDMTPTA >Mature_297_residues SMSIAVNEQKQIVNVKQVERGLACMCFCFECGEPVVARKGDKNEHHFAHLNNKESCTIHPESILHKFAKQVIMQERYLTL PSLPDDENSEDKTWEFDHLIEEQAVSCIRPDIVATVDGEMMFIEVAVTSFIDTDKSDFIKQLGIKTVEIDLREIIAQGIE LPSEEAKVHILDCASNKRWIFPAPKSLTIPVAPTPLPEPLYNCQSSTDENSNGSFDKGYTIYRFTINHAWVDVRVFNSGM VSIKCVTYNHDVIEILKQWRNEGGGQYNQKYKSWNYFKPFSDTVFQRLQEMDMTPTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34124; Mature: 33993
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMSIAVNEQKQIVNVKQVERGLACMCFCFECGEPVVARKGDKNEHHFAHLNNKESCTIH CCCEEEECCHHHHHHHHHHHCCCEEEEEHHHCCCCCEECCCCCCCCEEEECCCCCCEEEC PESILHKFAKQVIMQERYLTLPSLPDDENSEDKTWEFDHLIEEQAVSCIRPDIVATVDGE HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCC MMFIEVAVTSFIDTDKSDFIKQLGIKTVEIDLREIIAQGIELPSEEAKVHILDCASNKRW EEEEEEEHHHHHCCCHHHHHHHHCCEEEEEHHHHHHHHHCCCCCCCCEEEEEEECCCCEE IFPAPKSLTIPVAPTPLPEPLYNCQSSTDENSNGSFDKGYTIYRFTINHAWVDVRVFNSG EEECCCCEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEEECCC MVSIKCVTYNHDVIEILKQWRNEGGGQYNQKYKSWNYFKPFSDTVFQRLQEMDMTPTA EEEEEEEEECCHHHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SMSIAVNEQKQIVNVKQVERGLACMCFCFECGEPVVARKGDKNEHHFAHLNNKESCTIH CCEEEECCHHHHHHHHHHHCCCEEEEEHHHCCCCCEECCCCCCCCEEEECCCCCCEEEC PESILHKFAKQVIMQERYLTLPSLPDDENSEDKTWEFDHLIEEQAVSCIRPDIVATVDGE HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCC MMFIEVAVTSFIDTDKSDFIKQLGIKTVEIDLREIIAQGIELPSEEAKVHILDCASNKRW EEEEEEEHHHHHCCCHHHHHHHHCCEEEEEHHHHHHHHHCCCCCCCCEEEEEEECCCCEE IFPAPKSLTIPVAPTPLPEPLYNCQSSTDENSNGSFDKGYTIYRFTINHAWVDVRVFNSG EEECCCCEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEEECCC MVSIKCVTYNHDVIEILKQWRNEGGGQYNQKYKSWNYFKPFSDTVFQRLQEMDMTPTA EEEEEEEEECCHHHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA