Click here to switch to the map view.

The map label for this gene is 93006439

Identifier: 93006439

GI number: 93006439

Start: 1987549

End: 1988085

Strand: Direct

Name: 93006439

Synonym: Pcryo_1615

Alternate gene names: NA

Gene position: 1987549-1988085 (Clockwise)

Preceding gene: 93006438

Following gene: 93006440

Centisome position: 64.96

GC content: 41.34

Gene sequence:

>537_bases
ATGACACTCACTACTATGCTACTAATTACAATACTGCTGATATTAGCCATGCTTGTATGGGCTATACAACGGATACAATT
ACAAAATAAGGCTTTGCTACAAAGTGAACGAGATGTTGCGCAAATTAGGAACGATATGCTCGAAAGAGAAGCAGGCTTTC
AACAGCAATTAGCAAAAGACATTAAAGAGGCTCAAAAGCGTTCCAACAATATGCAGCGCAATGTGCTAAAAGGTCAAATT
GGCGAACAGTTCACGCCCTTTATTACTGACTTTCCTTACAACCCTTCAGACTGCCGATTCATGGGTGAACCGATTGACTA
CGTCATCTTCCAAAACTTGCATGAATGCGCCGATGGCAACGTGCCTATCGAGGACGTGCATCTCATTATTGCAGAAGTTA
AAACAGGGAATGCTAGGCTAAACCAACGGCAGAAGATTATTAAACAAGTAATCGAAAATGGGCAGGTTAGCTTTAAAGAG
CTTAGGATAAAACACTGTGAAGATACGGAAGATATGCGTGTGAATGTTAGTGCCTAG

Upstream 100 bases:

>100_bases
TCAAACCATTTTCAGACACCGTCTTTCAGCGACTGCAAGAAATGGACATGACCCCTACTGCTTAAATATGATTCTATTTG
ATAATACGGAGAATAAAACT

Downstream 100 bases:

>100_bases
TTCAGTCTTTCTATTCACTCCAACCTTTATATATACAGTCTCTATAATCTTCTTAAAACATATTTACTGGAAAAATAAAG
ACCATTCATTAATCTCTAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MTLTTMLLITILLILAMLVWAIQRIQLQNKALLQSERDVAQIRNDMLEREAGFQQQLAKDIKEAQKRSNNMQRNVLKGQI
GEQFTPFITDFPYNPSDCRFMGEPIDYVIFQNLHECADGNVPIEDVHLIIAEVKTGNARLNQRQKIIKQVIENGQVSFKE
LRIKHCEDTEDMRVNVSA

Sequences:

>Translated_178_residues
MTLTTMLLITILLILAMLVWAIQRIQLQNKALLQSERDVAQIRNDMLEREAGFQQQLAKDIKEAQKRSNNMQRNVLKGQI
GEQFTPFITDFPYNPSDCRFMGEPIDYVIFQNLHECADGNVPIEDVHLIIAEVKTGNARLNQRQKIIKQVIENGQVSFKE
LRIKHCEDTEDMRVNVSA
>Mature_177_residues
TLTTMLLITILLILAMLVWAIQRIQLQNKALLQSERDVAQIRNDMLEREAGFQQQLAKDIKEAQKRSNNMQRNVLKGQIG
EQFTPFITDFPYNPSDCRFMGEPIDYVIFQNLHECADGNVPIEDVHLIIAEVKTGNARLNQRQKIIKQVIENGQVSFKEL
RIKHCEDTEDMRVNVSA

Specific function: Unknown

COG id: COG4741

COG function: function code F; Predicted secreted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20539; Mature: 20408

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTTMLLITILLILAMLVWAIQRIQLQNKALLQSERDVAQIRNDMLEREAGFQQQLAKD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
IKEAQKRSNNMQRNVLKGQIGEQFTPFITDFPYNPSDCRFMGEPIDYVIFQNLHECADGN
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
VPIEDVHLIIAEVKTGNARLNQRQKIIKQVIENGQVSFKELRIKHCEDTEDMRVNVSA
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCEEECCC
>Mature Secondary Structure 
TLTTMLLITILLILAMLVWAIQRIQLQNKALLQSERDVAQIRNDMLEREAGFQQQLAKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
IKEAQKRSNNMQRNVLKGQIGEQFTPFITDFPYNPSDCRFMGEPIDYVIFQNLHECADGN
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
VPIEDVHLIIAEVKTGNARLNQRQKIIKQVIENGQVSFKELRIKHCEDTEDMRVNVSA
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA