Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is 93005453
Identifier: 93005453
GI number: 93005453
Start: 742057
End: 743253
Strand: Direct
Name: 93005453
Synonym: Pcryo_0623
Alternate gene names: NA
Gene position: 742057-743253 (Clockwise)
Preceding gene: 93005452
Following gene: 93005454
Centisome position: 24.25
GC content: 35.67
Gene sequence:
>1197_bases ATGGGACATGATGTGACGGTTCTAACAACACCTAAGCCGCAAAAAAGTTCTGATATGCCTATGTCTTATGAGGGGTTTAA AGCACATGAAATACCTGTGCCTTTATTAAGTACCTATAGTTTACGTAAAGCTGAATCCTTAAAGGCCTTAGTAGGCGATG AGGTTTTAAATGAACCTACAAAAACACCATGGTTCAAACGTTCAGTATTTTTTTTAAGCCAAAAGTATGGAATGTTCTAT GGTTGTAGATTTCCTGACTTTACAGATTTATGGACACCGAACGCTACAAAGTGGGCAATAAATGAGTCTTGGGATTTAGT TGTTTCTACAGGCGGGCCCTATACTGTTCATAGGGTAGGCTTAGCTATTAAAAAGAAAAATCCTAATACTAAATGGATAG TTGATTGGAGAGATCTATGGACTGATAACCATCTGTTCCCTGGTTTCCCAATATTTGAGCATTATGAAAGAAATTTAGAA AACAGGTTCCATAAGTATGCTGATCTTATAACTACTGTTTCTAAGCCACTAGCTAACAAAATTCAAAGTAAAGTTAGAAG TAAAGTGGAGGTTGTATATAATGGCTATGATTTAGAAGATTTTGAGGCATTGAGTGATAAACCTTACTTTCCAAAAGACG ATATGATACGTATTGTGTATACTGGGTCAATTTATAAAGGCAAACAGGACCCTTCGCCTCTTTTTAGAGCAATAGCTAAT CTTAAGAAATCAATTAGACTTAACCCTGACTCTCTAAAAGTTTTTTTTGCTGGAAATAACTCGGATGTTACTTCATTGGC AAGTGAATATGATGTTGAGGAATTCTGTGAATATTTAGGTTTTTTACCACGGGAAGATGCTCTTAGGGCACAACGCGACG CCAATATTTTACTTTTTTTAGAATTTGAAGCGCCTGGTATAACAGGGGTATTGACGGGTAAGATCTTTGAATATCTTGCA ACTAAAAAATATATTTTAGGTGTGGGTGCAACTGAAGAAACTAGTACAGGTCAATTGATTGTCAGTTCAGGACATGGTTC AGTTGTAGGTAAAGATGTTAAATTAATATCCCAAACTATTAAGAATTGGATAGAATATGGGGTTCCAGATATATCTTTAT TTGGTAAAGATATAGTTGAAGAGTTTTCTAGGAAGATTCAGGCAGAGAACGTGCTTGCTTTTCTGGATAAAGCTTAA
Upstream 100 bases:
>100_bases TAAATTTTTTATGAAAATTTTAATAGTAAGTACTTTTTTTCCTCCCCAAAACTCTATTGCTTCTTTGCGACCCTATAGTT GGGCTAAATGGTGGTCTCGA
Downstream 100 bases:
>100_bases TTCAAAAATAAATAATAAGGCTCAAGTTTATATGAAATTTCTGATAACGGGCGGTGCGGGTTTCATTGGTTCTGCTGTGG TAAGGCATTTGCTACAGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MGHDVTVLTTPKPQKSSDMPMSYEGFKAHEIPVPLLSTYSLRKAESLKALVGDEVLNEPTKTPWFKRSVFFLSQKYGMFY GCRFPDFTDLWTPNATKWAINESWDLVVSTGGPYTVHRVGLAIKKKNPNTKWIVDWRDLWTDNHLFPGFPIFEHYERNLE NRFHKYADLITTVSKPLANKIQSKVRSKVEVVYNGYDLEDFEALSDKPYFPKDDMIRIVYTGSIYKGKQDPSPLFRAIAN LKKSIRLNPDSLKVFFAGNNSDVTSLASEYDVEEFCEYLGFLPREDALRAQRDANILLFLEFEAPGITGVLTGKIFEYLA TKKYILGVGATEETSTGQLIVSSGHGSVVGKDVKLISQTIKNWIEYGVPDISLFGKDIVEEFSRKIQAENVLAFLDKA
Sequences:
>Translated_398_residues MGHDVTVLTTPKPQKSSDMPMSYEGFKAHEIPVPLLSTYSLRKAESLKALVGDEVLNEPTKTPWFKRSVFFLSQKYGMFY GCRFPDFTDLWTPNATKWAINESWDLVVSTGGPYTVHRVGLAIKKKNPNTKWIVDWRDLWTDNHLFPGFPIFEHYERNLE NRFHKYADLITTVSKPLANKIQSKVRSKVEVVYNGYDLEDFEALSDKPYFPKDDMIRIVYTGSIYKGKQDPSPLFRAIAN LKKSIRLNPDSLKVFFAGNNSDVTSLASEYDVEEFCEYLGFLPREDALRAQRDANILLFLEFEAPGITGVLTGKIFEYLA TKKYILGVGATEETSTGQLIVSSGHGSVVGKDVKLISQTIKNWIEYGVPDISLFGKDIVEEFSRKIQAENVLAFLDKA >Mature_397_residues GHDVTVLTTPKPQKSSDMPMSYEGFKAHEIPVPLLSTYSLRKAESLKALVGDEVLNEPTKTPWFKRSVFFLSQKYGMFYG CRFPDFTDLWTPNATKWAINESWDLVVSTGGPYTVHRVGLAIKKKNPNTKWIVDWRDLWTDNHLFPGFPIFEHYERNLEN RFHKYADLITTVSKPLANKIQSKVRSKVEVVYNGYDLEDFEALSDKPYFPKDDMIRIVYTGSIYKGKQDPSPLFRAIANL KKSIRLNPDSLKVFFAGNNSDVTSLASEYDVEEFCEYLGFLPREDALRAQRDANILLFLEFEAPGITGVLTGKIFEYLAT KKYILGVGATEETSTGQLIVSSGHGSVVGKDVKLISQTIKNWIEYGVPDISLFGKDIVEEFSRKIQAENVLAFLDKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45192; Mature: 45061
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHDVTVLTTPKPQKSSDMPMSYEGFKAHEIPVPLLSTYSLRKAESLKALVGDEVLNEPT CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC KTPWFKRSVFFLSQKYGMFYGCRFPDFTDLWTPNATKWAINESWDLVVSTGGPYTVHRVG CCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEEECCCCEEEEECCCCEEEEEEE LAIKKKNPNTKWIVDWRDLWTDNHLFPGFPIFEHYERNLENRFHKYADLITTVSKPLANK EEEEECCCCCEEEEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IQSKVRSKVEVVYNGYDLEDFEALSDKPYFPKDDMIRIVYTGSIYKGKQDPSPLFRAIAN HHHHHHHCEEEEECCCCCHHHHHHCCCCCCCCCCEEEEEEECCEECCCCCCHHHHHHHHH LKKSIRLNPDSLKVFFAGNNSDVTSLASEYDVEEFCEYLGFLPREDALRAQRDANILLFL HHHHEEECCCCEEEEEECCCCCHHHHHHHCCHHHHHHHHCCCCCHHHHHHHCCCCEEEEE EFEAPGITGVLTGKIFEYLATKKYILGVGATEETSTGQLIVSSGHGSVVGKDVKLISQTI EECCCCCEEHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEECCCCCEEHHHHHHHHHHH KNWIEYGVPDISLFGKDIVEEFSRKIQAENVLAFLDKA HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GHDVTVLTTPKPQKSSDMPMSYEGFKAHEIPVPLLSTYSLRKAESLKALVGDEVLNEPT CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC KTPWFKRSVFFLSQKYGMFYGCRFPDFTDLWTPNATKWAINESWDLVVSTGGPYTVHRVG CCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEEECCCCEEEEECCCCEEEEEEE LAIKKKNPNTKWIVDWRDLWTDNHLFPGFPIFEHYERNLENRFHKYADLITTVSKPLANK EEEEECCCCCEEEEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IQSKVRSKVEVVYNGYDLEDFEALSDKPYFPKDDMIRIVYTGSIYKGKQDPSPLFRAIAN HHHHHHHCEEEEECCCCCHHHHHHCCCCCCCCCCEEEEEEECCEECCCCCCHHHHHHHHH LKKSIRLNPDSLKVFFAGNNSDVTSLASEYDVEEFCEYLGFLPREDALRAQRDANILLFL HHHHEEECCCCEEEEEECCCCCHHHHHHHCCHHHHHHHHCCCCCHHHHHHHCCCCEEEEE EFEAPGITGVLTGKIFEYLATKKYILGVGATEETSTGQLIVSSGHGSVVGKDVKLISQTI EECCCCCEEHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEECCCCCEEHHHHHHHHHHH KNWIEYGVPDISLFGKDIVEEFSRKIQAENVLAFLDKA HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA