Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is hemH [H]
Identifier: 93005245
GI number: 93005245
Start: 505119
End: 506138
Strand: Direct
Name: hemH [H]
Synonym: Pcryo_0415
Alternate gene names: 93005245
Gene position: 505119-506138 (Clockwise)
Preceding gene: 93005240
Following gene: 93005252
Centisome position: 16.51
GC content: 48.43
Gene sequence:
>1020_bases ATGAAACCTGACCTGCCTCCCCGTATTGCCGTTTTACTTGTCAACCTTGGTACGCCAGATGAACCGACCGCGCCAGCTGT CCGTCGTTATCTCAAACAGTTTTTGTCCGATCCGCGCGTGATTGAAATCCCAAAATTCTTATGGGCGATTATCCTCAATC TGTTTGTGCTGCCAAGTCGCCCGAAACGGGTAGCAGAAGCATATGCCAGTATTTGGGATGGCGATTCGCCGATGCGCAAT ATTCTTAACGCGCAAGTTGAGATGTTAGACAAGCGTTTGGCTGACCGTGCTGCGCCATTTCGCGTGTCTGTTCATGCCGC GATGAGCTACGGTAATCCGGGTTTGCCTGATGTCATGGATCAATTGCGTAGCGAAGGGGTTGACCATTTCGTCATGTTAC CCGTGTTTCCGCAGTATTCGGCGACTTCAACAGGTGCGGTTTATGATGCGATTACTAAGTGGTCGCTGAAGCAGCGTAAT TTGCCCAATATAACGATAGTCAAAGATTACTTTGCTCATCCTTTATATATTAAAGCATTAGCAGATAGCATCCGTCGTTT TCAAGCGGTACATGGCAAGCCTGAAAAGCTCATGTTTAGCTTTCACGGTATTCCGCAGCCTTATGCTGATAAAGGCGACC CGTACCCCAAACGCTGTAAATGTACGGCGGCACAAGTGGCTCATGAGCTTGGGCTAAAACCAGATGAATGGATTATCAGT TTCCAGTCACGCTTTGGTAAGCAAGAATGGATTAAGCCCTATACCGATGTGGTACTCAAAGAGTGGGGCAGCTCAGGTGT GCGCTCGGTACAAATTCTGAGTCCTGCGTTTTCGGCAGATTGCCTAGAAACCTTGGAAGAATTGGCTATCGAAAACCGCG AGACTTTCCTGCATGCTGGCGGGCAAGAATACCATTATATTCCAGCGCTCAACGCTGATGAAGCACATATAGACTTGTTA GAGGCAATGAGTGCACCATTGGTAAAAGGTTGGGCAGGGACTCTGGATGGTTGGGCATAA
Upstream 100 bases:
>100_bases AAGGGTTAAAATGCTACACTAACGGCGTGCTCATTGAATACTGTCTTAACAATCTTTTGTAGAGCTTCCTTCATCAACTT AACCATAAAACAGTGCTGCT
Downstream 100 bases:
>100_bases ACGTTTTTAATATCAAATGAATATTCAAAAAAATACCGAACATCATGTTCGGTATTTTTTTATCAATAATTTTCTAAAAG TACTATTTAAAAGTCATTGT
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase [H]
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MKPDLPPRIAVLLVNLGTPDEPTAPAVRRYLKQFLSDPRVIEIPKFLWAIILNLFVLPSRPKRVAEAYASIWDGDSPMRN ILNAQVEMLDKRLADRAAPFRVSVHAAMSYGNPGLPDVMDQLRSEGVDHFVMLPVFPQYSATSTGAVYDAITKWSLKQRN LPNITIVKDYFAHPLYIKALADSIRRFQAVHGKPEKLMFSFHGIPQPYADKGDPYPKRCKCTAAQVAHELGLKPDEWIIS FQSRFGKQEWIKPYTDVVLKEWGSSGVRSVQILSPAFSADCLETLEELAIENRETFLHAGGQEYHYIPALNADEAHIDLL EAMSAPLVKGWAGTLDGWA
Sequences:
>Translated_339_residues MKPDLPPRIAVLLVNLGTPDEPTAPAVRRYLKQFLSDPRVIEIPKFLWAIILNLFVLPSRPKRVAEAYASIWDGDSPMRN ILNAQVEMLDKRLADRAAPFRVSVHAAMSYGNPGLPDVMDQLRSEGVDHFVMLPVFPQYSATSTGAVYDAITKWSLKQRN LPNITIVKDYFAHPLYIKALADSIRRFQAVHGKPEKLMFSFHGIPQPYADKGDPYPKRCKCTAAQVAHELGLKPDEWIIS FQSRFGKQEWIKPYTDVVLKEWGSSGVRSVQILSPAFSADCLETLEELAIENRETFLHAGGQEYHYIPALNADEAHIDLL EAMSAPLVKGWAGTLDGWA >Mature_339_residues MKPDLPPRIAVLLVNLGTPDEPTAPAVRRYLKQFLSDPRVIEIPKFLWAIILNLFVLPSRPKRVAEAYASIWDGDSPMRN ILNAQVEMLDKRLADRAAPFRVSVHAAMSYGNPGLPDVMDQLRSEGVDHFVMLPVFPQYSATSTGAVYDAITKWSLKQRN LPNITIVKDYFAHPLYIKALADSIRRFQAVHGKPEKLMFSFHGIPQPYADKGDPYPKRCKCTAAQVAHELGLKPDEWIIS FQSRFGKQEWIKPYTDVVLKEWGSSGVRSVQILSPAFSADCLETLEELAIENRETFLHAGGQEYHYIPALNADEAHIDLL EAMSAPLVKGWAGTLDGWA
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499025, Length=308, Percent_Identity=25.974025974026, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI60499021, Length=308, Percent_Identity=25.974025974026, Blast_Score=97, Evalue=2e-20, Organism=Escherichia coli, GI1786681, Length=319, Percent_Identity=46.7084639498433, Blast_Score=307, Evalue=7e-85, Organism=Saccharomyces cerevisiae, GI6324750, Length=289, Percent_Identity=23.1833910034602, Blast_Score=68, Evalue=2e-12, Organism=Drosophila melanogaster, GI17864156, Length=294, Percent_Identity=26.1904761904762, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI24651774, Length=263, Percent_Identity=25.4752851711027, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI45552018, Length=143, Percent_Identity=28.6713286713287, Blast_Score=68, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 - InterPro: IPR019772 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 38051; Mature: 38051
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPDLPPRIAVLLVNLGTPDEPTAPAVRRYLKQFLSDPRVIEIPKFLWAIILNLFVLPSR CCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCC PKRVAEAYASIWDGDSPMRNILNAQVEMLDKRLADRAAPFRVSVHAAMSYGNPGLPDVMD HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCHHHHH QLRSEGVDHFVMLPVFPQYSATSTGAVYDAITKWSLKQRNLPNITIVKDYFAHPLYIKAL HHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHCCHHHHHHH ADSIRRFQAVHGKPEKLMFSFHGIPQPYADKGDPYPKRCKCTAAQVAHELGLKPDEWIIS HHHHHHHHHHCCCCHHEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH FQSRFGKQEWIKPYTDVVLKEWGSSGVRSVQILSPAFSADCLETLEELAIENRETFLHAG HHHHCCHHHHCCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHEECC GQEYHYIPALNADEAHIDLLEAMSAPLVKGWAGTLDGWA CCCEEEECCCCCCHHHHHHHHHHCCCHHHCCCCCCCCCC >Mature Secondary Structure MKPDLPPRIAVLLVNLGTPDEPTAPAVRRYLKQFLSDPRVIEIPKFLWAIILNLFVLPSR CCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCC PKRVAEAYASIWDGDSPMRNILNAQVEMLDKRLADRAAPFRVSVHAAMSYGNPGLPDVMD HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCHHHHH QLRSEGVDHFVMLPVFPQYSATSTGAVYDAITKWSLKQRNLPNITIVKDYFAHPLYIKAL HHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHCCHHHHHHH ADSIRRFQAVHGKPEKLMFSFHGIPQPYADKGDPYPKRCKCTAAQVAHELGLKPDEWIIS HHHHHHHHHHCCCCHHEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH FQSRFGKQEWIKPYTDVVLKEWGSSGVRSVQILSPAFSADCLETLEELAIENRETFLHAG HHHHCCHHHHCCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHEECC GQEYHYIPALNADEAHIDLLEAMSAPLVKGWAGTLDGWA CCCEEEECCCCCCHHHHHHHHHHCCCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA