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The map label for this gene is 93005209

Identifier: 93005209

GI number: 93005209

Start: 461111

End: 461926

Strand: Reverse

Name: 93005209

Synonym: Pcryo_0379

Alternate gene names: NA

Gene position: 461926-461111 (Counterclockwise)

Preceding gene: 93005210

Following gene: 93005208

Centisome position: 15.1

GC content: 43.26

Gene sequence:

>816_bases
ATGTCACAAGCTTTTTCGTCTGACCCTATTTTGGTCTTTGATATTGAAACGGTTGCAGATACCGATGCTGCCCGCCGTAT
CTATCCGCAATTGGCTAAGCTCAACGATGCAGATACACTCAGTGCGTTAACTGCCATTCGTATACAAGAAGCCGGGCATG
ATTTTATGCGTTTGCCATTACAGCGCATTGTCTGTATCTCTGCTCTATATATTAAAGATGGCACATTTTCATTATTTTCC
CTTACTGCAGACAAATTTAGCGAAGAAGAGATTCTTGCCAAGTTTTTTCGCGCCTTTAATGATATTGCAAAACTGCCTAA
ATTGATTAGCTGGAATGGTTCAGGTTTTGACATTCCTGTACTTATTTATCGTGCCATGCAATATGACTTGGCAGCGCCTT
GGTTATTTGAAGAAGGTGAGCGTATCAAAAACATGCGTTTTGATAATTATGTCAATCGCTTTCATACCCGCCATATTGAC
TTGATGGATCGATTTAGCCAATACGGTGCCAGCCGCCGCGAGGCTATGGATGTCGTTGCTAGTCTATATGGTTTACCCGG
TAAAACAGATGTTGATGGCAGTATGGTCGGCGAGCTTGTCAGCAATAATGACTGGCAAACGCTGTCAATATATTGCGAGT
CTGATGTGATGAATACTTGGCTAATATATCTGCGTTGGCTGCGCCTGACCGGTCAGCTATCCTTGTCAGATTTTGCCATT
TGGCAGCAGCAAAGCCGTGATTATTTAACCAAATTTTCCCAAGTAGATGGCACGCCACGTCATCAGGCGTTTTTGAATGA
CTGGCTTATCAGCTAG

Upstream 100 bases:

>100_bases
TAATGTAAACTAAGATAATTTATAAATCGCTGACAATGCCGTTTATGCGGTCAGTGCGTTTAATGCAGTGTAGTAAGACA
ATAATCAGGTAGAAACCTCT

Downstream 100 bases:

>100_bases
CAATTTTAGCCAGTTGATATATTGATGAACGATACATGTAAGCGGTGATTATAGTTTTATAATCACCGCTTTTTTTACTT
TGTGAGCGCCTAATACCTTA

Product: hypothetical protein

Products: NA

Alternate protein names: Polysaccharide Biosynthesis Protein; 3-5' Exonuclease PolB-Like Protein; Propable PolB; Polysaccharide Biosynthesis Protein WlaX; Lipoprotein SmpA/OmlA Family; 3&Apos; Large-Conductance Mechanosensitive Channel

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MSQAFSSDPILVFDIETVADTDAARRIYPQLAKLNDADTLSALTAIRIQEAGHDFMRLPLQRIVCISALYIKDGTFSLFS
LTADKFSEEEILAKFFRAFNDIAKLPKLISWNGSGFDIPVLIYRAMQYDLAAPWLFEEGERIKNMRFDNYVNRFHTRHID
LMDRFSQYGASRREAMDVVASLYGLPGKTDVDGSMVGELVSNNDWQTLSIYCESDVMNTWLIYLRWLRLTGQLSLSDFAI
WQQQSRDYLTKFSQVDGTPRHQAFLNDWLIS

Sequences:

>Translated_271_residues
MSQAFSSDPILVFDIETVADTDAARRIYPQLAKLNDADTLSALTAIRIQEAGHDFMRLPLQRIVCISALYIKDGTFSLFS
LTADKFSEEEILAKFFRAFNDIAKLPKLISWNGSGFDIPVLIYRAMQYDLAAPWLFEEGERIKNMRFDNYVNRFHTRHID
LMDRFSQYGASRREAMDVVASLYGLPGKTDVDGSMVGELVSNNDWQTLSIYCESDVMNTWLIYLRWLRLTGQLSLSDFAI
WQQQSRDYLTKFSQVDGTPRHQAFLNDWLIS
>Mature_270_residues
SQAFSSDPILVFDIETVADTDAARRIYPQLAKLNDADTLSALTAIRIQEAGHDFMRLPLQRIVCISALYIKDGTFSLFSL
TADKFSEEEILAKFFRAFNDIAKLPKLISWNGSGFDIPVLIYRAMQYDLAAPWLFEEGERIKNMRFDNYVNRFHTRHIDL
MDRFSQYGASRREAMDVVASLYGLPGKTDVDGSMVGELVSNNDWQTLSIYCESDVMNTWLIYLRWLRLTGQLSLSDFAIW
QQQSRDYLTKFSQVDGTPRHQAFLNDWLIS

Specific function: Unknown

COG id: COG3298

COG function: function code L; Predicted 3'-5' exonuclease related to the exonuclease domain of PolB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31204; Mature: 31073

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQAFSSDPILVFDIETVADTDAARRIYPQLAKLNDADTLSALTAIRIQEAGHDFMRLPL
CCCCCCCCCEEEEEEHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHH
QRIVCISALYIKDGTFSLFSLTADKFSEEEILAKFFRAFNDIAKLPKLISWNGSGFDIPV
HHHHHHHHHHCCCCCEEEEEEHHHHCCHHHHHHHHHHHHHHHHHCCHHEECCCCCCCHHH
LIYRAMQYDLAAPWLFEEGERIKNMRFDNYVNRFHTRHIDLMDRFSQYGASRREAMDVVA
HHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
SLYGLPGKTDVDGSMVGELVSNNDWQTLSIYCESDVMNTWLIYLRWLRLTGQLSLSDFAI
HHHCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHH
WQQQSRDYLTKFSQVDGTPRHQAFLNDWLIS
HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
SQAFSSDPILVFDIETVADTDAARRIYPQLAKLNDADTLSALTAIRIQEAGHDFMRLPL
CCCCCCCCEEEEEEHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHH
QRIVCISALYIKDGTFSLFSLTADKFSEEEILAKFFRAFNDIAKLPKLISWNGSGFDIPV
HHHHHHHHHHCCCCCEEEEEEHHHHCCHHHHHHHHHHHHHHHHHCCHHEECCCCCCCHHH
LIYRAMQYDLAAPWLFEEGERIKNMRFDNYVNRFHTRHIDLMDRFSQYGASRREAMDVVA
HHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
SLYGLPGKTDVDGSMVGELVSNNDWQTLSIYCESDVMNTWLIYLRWLRLTGQLSLSDFAI
HHHCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHH
WQQQSRDYLTKFSQVDGTPRHQAFLNDWLIS
HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA