Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is thiG [H]
Identifier: 93005079
GI number: 93005079
Start: 292257
End: 293081
Strand: Reverse
Name: thiG [H]
Synonym: Pcryo_0248
Alternate gene names: 93005079
Gene position: 293081-292257 (Counterclockwise)
Preceding gene: 93005081
Following gene: 93005078
Centisome position: 9.58
GC content: 46.06
Gene sequence:
>825_bases ATGTCAGATAACACTAGCACTGCCACTCAATCGACACCCCTTTTGCAAGATACTTTTACGGTAGGCAGTCGTACTTTTTC TTCTCGATTATTGGTCGGTACGGGTAAGTATAAAGATATGACTGAAACGGGTGCCGCCATCGGCGCGTCAGCAGCAGAGA TAGTGACGGTCGCTATTCGTCGTACCAATATCGGTCAAAATAGCAATGAGCCCAATTTGCTTGATGTCATTTCACCAGAT AAATACACTATTTTGCCAAATACAGCGGGTTGTTTTGATGCAGAAACGGCGATTCGTACTTGTAAGCTTGCTCGCGAGCT ATTAGGCGGGCATAATCTGGTTAAGCTTGAAGTATTAGGGGACGAAAAAACCTTATACCCTAATGTGATGGAAACACTCA AAGCTGCCAAAGTGTTGATTGATGACGGTTTTGAGGTCATGGTATATACGTCAGACGACCCTATCGTTGCTCAAGAATTA GAGAGTATGGGCTGCGTGGCAATTATGCCACTTGGTAGTCTGATTGGCTCTGGTCTTGGTTTGCTCAATCGCCATACATT AAGCTTGATTATTGAAAATGCGAAAGTACCCGTATTGGTTGATGCTGGTGTCGGTACAGCTTCTGATGCCGCGATTGCCA TGGAACTTGGCTGTGATGGCGTACTGATGAATTCAGCCATTGCTAATGCGCAAAATCCTGTGATGATGGCTCAAGCAATG AAACATGCGGTATGGGCAGGTCGTCAGGCTTTCTTGGCGGGTCGTATGCCGATGCGCAAAATGGCAACTGCCAGCTCACC ACAGACGGGATACTTTTTTCAGTAG
Upstream 100 bases:
>100_bases GTATTATTCTTAACTGGCTCAACTCAAAAAGACTGCAAGTAAGATTGCATGATTTTGTTATAATAGCATTTTGTTTTACT CGCCATTAGGATTTTCAGTT
Downstream 100 bases:
>100_bases TATTAAAGGTTAGGTGATTATATTTTTCATTATAAAAGGATTTATTATGCGACTTCTTACAGCAGTCGACCAGTTGTTTT TACTTCTTGAGTCGCGTAAA
Product: thiazole synthase
Products: 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate; 4-hydroxy-benzyl-alcohol; C1 of tyrosine; ThiS protein [C]
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MSDNTSTATQSTPLLQDTFTVGSRTFSSRLLVGTGKYKDMTETGAAIGASAAEIVTVAIRRTNIGQNSNEPNLLDVISPD KYTILPNTAGCFDAETAIRTCKLARELLGGHNLVKLEVLGDEKTLYPNVMETLKAAKVLIDDGFEVMVYTSDDPIVAQEL ESMGCVAIMPLGSLIGSGLGLLNRHTLSLIIENAKVPVLVDAGVGTASDAAIAMELGCDGVLMNSAIANAQNPVMMAQAM KHAVWAGRQAFLAGRMPMRKMATASSPQTGYFFQ
Sequences:
>Translated_274_residues MSDNTSTATQSTPLLQDTFTVGSRTFSSRLLVGTGKYKDMTETGAAIGASAAEIVTVAIRRTNIGQNSNEPNLLDVISPD KYTILPNTAGCFDAETAIRTCKLARELLGGHNLVKLEVLGDEKTLYPNVMETLKAAKVLIDDGFEVMVYTSDDPIVAQEL ESMGCVAIMPLGSLIGSGLGLLNRHTLSLIIENAKVPVLVDAGVGTASDAAIAMELGCDGVLMNSAIANAQNPVMMAQAM KHAVWAGRQAFLAGRMPMRKMATASSPQTGYFFQ >Mature_273_residues SDNTSTATQSTPLLQDTFTVGSRTFSSRLLVGTGKYKDMTETGAAIGASAAEIVTVAIRRTNIGQNSNEPNLLDVISPDK YTILPNTAGCFDAETAIRTCKLARELLGGHNLVKLEVLGDEKTLYPNVMETLKAAKVLIDDGFEVMVYTSDDPIVAQELE SMGCVAIMPLGSLIGSGLGLLNRHTLSLIIENAKVPVLVDAGVGTASDAAIAMELGCDGVLMNSAIANAQNPVMMAQAMK HAVWAGRQAFLAGRMPMRKMATASSPQTGYFFQ
Specific function: Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S [H]
COG id: COG2022
COG function: function code H; Uncharacterized enzyme of thiazole biosynthesis
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiG family [H]
Homologues:
Organism=Escherichia coli, GI48994993, Length=252, Percent_Identity=44.4444444444444, Blast_Score=197, Evalue=5e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR008867 [H]
Pfam domain/function: PF05690 ThiG [H]
EC number: NA
Molecular weight: Translated: 29006; Mature: 28875
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDNTSTATQSTPLLQDTFTVGSRTFSSRLLVGTGKYKDMTETGAAIGASAAEIVTVAIR CCCCCCCCCCCCCCHHHHHHHCCHHHCCEEEEECCCCCCHHHHCHHHCCCHHHEEEEEEE RTNIGQNSNEPNLLDVISPDKYTILPNTAGCFDAETAIRTCKLARELLGGHNLVKLEVLG ECCCCCCCCCCCEEEEECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEC DEKTLYPNVMETLKAAKVLIDDGFEVMVYTSDDPIVAQELESMGCVAIMPLGSLIGSGLG CCCCCCHHHHHHHHHHHHEEECCCEEEEEECCCCHHHHHHHHCCCEEEEEHHHHHHCCHH LLNRHTLSLIIENAKVPVLVDAGVGTASDAAIAMELGCDGVLMNSAIANAQNPVMMAQAM HHHHHEEEEEEECCCCCEEEECCCCCCCCCEEEEEECCCCEEHHHHHCCCCCHHHHHHHH KHAVWAGRQAFLAGRMPMRKMATASSPQTGYFFQ HHHHHHCCHHHHHCCCCHHHHHCCCCCCCCCCCC >Mature Secondary Structure SDNTSTATQSTPLLQDTFTVGSRTFSSRLLVGTGKYKDMTETGAAIGASAAEIVTVAIR CCCCCCCCCCCCCHHHHHHHCCHHHCCEEEEECCCCCCHHHHCHHHCCCHHHEEEEEEE RTNIGQNSNEPNLLDVISPDKYTILPNTAGCFDAETAIRTCKLARELLGGHNLVKLEVLG ECCCCCCCCCCCEEEEECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEC DEKTLYPNVMETLKAAKVLIDDGFEVMVYTSDDPIVAQELESMGCVAIMPLGSLIGSGLG CCCCCCHHHHHHHHHHHHEEECCCEEEEEECCCCHHHHHHHHCCCEEEEEHHHHHHCCHH LLNRHTLSLIIENAKVPVLVDAGVGTASDAAIAMELGCDGVLMNSAIANAQNPVMMAQAM HHHHHEEEEEEECCCCCEEEECCCCCCCCCEEEEEECCCCEEHHHHHCCCCCHHHHHHHH KHAVWAGRQAFLAGRMPMRKMATASSPQTGYFFQ HHHHHHCCHHHHHCCCCHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: deoxyxylulose-5-phosphate; ThiS-COSH; L-tyrosine [C]
Specific reaction: deoxyxylulose-5-phosphate + ThiS-COSH + L-tyrosine = 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate + 4-hydroxy-benzyl-alcohol + C1 of tyrosine + ThiS protein [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA