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The map label for this gene is ygeA [H]

Identifier: 93004852

GI number: 93004852

Start: 25934

End: 26653

Strand: Direct

Name: ygeA [H]

Synonym: Pcryo_0021

Alternate gene names: 93004852

Gene position: 25934-26653 (Clockwise)

Preceding gene: 93004847

Following gene: 93004854

Centisome position: 0.85

GC content: 45.83

Gene sequence:

>720_bases
ATGACCGTTCAAAAGCAGCGAACCTTAGGTATCATCGGTGGAATGAGTTGGGAAAGTACCCAAAGCTATTATCGGCTGAT
TAATGAAGGTATCAAGGCTAAACTTGGCAACTTACATTCAGCAGACTTATTGATTCATAGTGTCGACTTTGCGCCAATTG
GCGAGCTACAAGCCCAAGGCAAGTGGGAAGAGTTGGGTGATATCATGGTAAACAGTGGTAAGCGCTTACAAGCGGCTGGT
GCCCAAGGTTTATTAATTGCGACCAATACCATGCATAAAGTAGCAGAGCAGGTACAAGTGGCGACGAATTTGCCACTGAT
ACATATTGCAGATACGACCGCAGATGCGATTAAGCAGCAAGGTTTAACCAAGATTGCCTTACTCGGTACACAATTCACCA
TGACTGAGGACTTTTATAAACAGTGTCTGATGGATGCGGGCTTGCAGGTGCTGATACCAGATACCGATGCGCGTGTCGAA
GTCCATCGCATCATCTATGATGAGCTGTGCCAAGGACAATTGCTTGCCAGCTCACGGCAATATTATACGCAAGTGATTAA
TGAGTTAGCGGCACAAGGCGCTGAGGGCGCGATATTAGGCTGTACCGAGATTGGACTGTTAATTAGCCAAGCAGACAGTC
CAATCCCTGTGTTTGATACCACCGCTATCCATGCAGCCGCAGCGGTACAGTTTTTATTAGGTAATGAAAATTTTAGTTAA

Upstream 100 bases:

>100_bases
TATTTCTTTTCTAATAATGAAAATATTCTAAATATTGGCAAATTAAAGCTGAACTTTTGCTACGATAAGTAAGATTGAAA
TACATATAAAGAGTAATAGT

Downstream 100 bases:

>100_bases
AGGTAAAACCAGTTTCGGTATTTGCAGTAGTAGGTAAGTATGATGAATAATGTACTCGCCCATGCTAATGAGTAAAAGCC
GCCCGACTAGGCGTTATACA

Product: aspartate racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MTVQKQRTLGIIGGMSWESTQSYYRLINEGIKAKLGNLHSADLLIHSVDFAPIGELQAQGKWEELGDIMVNSGKRLQAAG
AQGLLIATNTMHKVAEQVQVATNLPLIHIADTTADAIKQQGLTKIALLGTQFTMTEDFYKQCLMDAGLQVLIPDTDARVE
VHRIIYDELCQGQLLASSRQYYTQVINELAAQGAEGAILGCTEIGLLISQADSPIPVFDTTAIHAAAAVQFLLGNENFS

Sequences:

>Translated_239_residues
MTVQKQRTLGIIGGMSWESTQSYYRLINEGIKAKLGNLHSADLLIHSVDFAPIGELQAQGKWEELGDIMVNSGKRLQAAG
AQGLLIATNTMHKVAEQVQVATNLPLIHIADTTADAIKQQGLTKIALLGTQFTMTEDFYKQCLMDAGLQVLIPDTDARVE
VHRIIYDELCQGQLLASSRQYYTQVINELAAQGAEGAILGCTEIGLLISQADSPIPVFDTTAIHAAAAVQFLLGNENFS
>Mature_238_residues
TVQKQRTLGIIGGMSWESTQSYYRLINEGIKAKLGNLHSADLLIHSVDFAPIGELQAQGKWEELGDIMVNSGKRLQAAGA
QGLLIATNTMHKVAEQVQVATNLPLIHIADTTADAIKQQGLTKIALLGTQFTMTEDFYKQCLMDAGLQVLIPDTDARVEV
HRIIYDELCQGQLLASSRQYYTQVINELAAQGAEGAILGCTEIGLLISQADSPIPVFDTTAIHAAAAVQFLLGNENFS

Specific function: Unknown

COG id: COG1794

COG function: function code M; Aspartate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

Organism=Escherichia coli, GI1789205, Length=228, Percent_Identity=53.9473684210526, Blast_Score=262, Evalue=2e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004380 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: NA

Molecular weight: Translated: 25883; Mature: 25752

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVQKQRTLGIIGGMSWESTQSYYRLINEGIKAKLGNLHSADLLIHSVDFAPIGELQAQG
CCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHEEEEECCCCCCCCHHCCC
KWEELGDIMVNSGKRLQAAGAQGLLIATNTMHKVAEQVQVATNLPLIHIADTTADAIKQQ
CHHHHHHHHHCCCCEEECCCCCEEEEECHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHC
GLTKIALLGTQFTMTEDFYKQCLMDAGLQVLIPDTDARVEVHRIIYDELCQGQLLASSRQ
CCEEEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHH
YYTQVINELAAQGAEGAILGCTEIGLLISQADSPIPVFDTTAIHAAAAVQFLLGNENFS
HHHHHHHHHHHCCCCCEEEEHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TVQKQRTLGIIGGMSWESTQSYYRLINEGIKAKLGNLHSADLLIHSVDFAPIGELQAQG
CCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHEEEEECCCCCCCCHHCCC
KWEELGDIMVNSGKRLQAAGAQGLLIATNTMHKVAEQVQVATNLPLIHIADTTADAIKQQ
CHHHHHHHHHCCCCEEECCCCCEEEEECHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHC
GLTKIALLGTQFTMTEDFYKQCLMDAGLQVLIPDTDARVEVHRIIYDELCQGQLLASSRQ
CCEEEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHH
YYTQVINELAAQGAEGAILGCTEIGLLISQADSPIPVFDTTAIHAAAAVQFLLGNENFS
HHHHHHHHHHHCCCCCEEEEHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6350602; 2836407; 9278503 [H]