| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is bdhA [H]
Identifier: 92113948
GI number: 92113948
Start: 2074831
End: 2075607
Strand: Direct
Name: bdhA [H]
Synonym: Csal_1825
Alternate gene names: 92113948
Gene position: 2074831-2075607 (Clockwise)
Preceding gene: 92113944
Following gene: 92113951
Centisome position: 56.13
GC content: 63.45
Gene sequence:
>777_bases ATGCCAGCCCCGTCCACTCCCGGGTCCCCCCGCGTCGCGATCGTGACCGGCAGTTCCAGCGGTATTGGCGAAGCCGTCGT CAAGCAGTTCTGCCAGGAAGGGTTGCAAGTGCTGGCGGTGGACGCCAACCCGCAAGGCGAGAATGTGGCCGATGCCGCGG GGGCGGTGTTCTATCATGCCGACCTGACGACATCCGCCGCATGTCGCGGCGCGGTGGAAGAAGCGATAAAGCGTTTCGGG CATGTCGATATTCTGATCAACAACGCCGGCATCCAGCATGTCGCGCCCCTGGAGACGTTTCCAGAGGCCAAGTGGCGCCA GATCATCGACTTGATGCTGACGGCGCCCTTTTTGCTGACACAGGCGGCATGGCCGTACATGCGCCAGTCTTCATGGGGAC GTATCGTCAACGTGGCCTCCATTCACGCCAGTGTGGCGTCGCCCGGCAAGGCGGCATACGTGAGCGCCAAGCATGGCTTG ATCGGGCTGACCAAGACCGCGGCGCTCGAGGGCGGCGAGCTGGGCATTACCGCCAATGCCATTTGCCCCGCTTATGTCAG GACGCCGCTGGTGGAAAGCCAGATCGCCGACCAGGCACGCCTCAATGGCATGCCCGAGCAGGAGGTGATCGACAATGTCA TGCTCAAGAACGCTGCGATCAAACGTCTCATCGAGCCGTCCGAGGTGGCCGCGCTGGTGAGCTACCTGGCATCGGACAAG GCCAGCGCCGTGACCGGCGCGAGCTGGAACATGGATCTGGGGTGGACGGCGCAATGA
Upstream 100 bases:
>100_bases CAGTCTTGCGCAGGGGCGTAAGCGTGTGGATGTTGCTGGCGAAGGGCGTGGCTCGCGTCTTATGCTGGATGACGAGCGTT CCGTCATCGAGGAGAGTGCC
Downstream 100 bases:
>100_bases GGCGCGCCATCCACGTCCGGGATCAGTGACGCACCGGGCGTTTCTGGAGCTTGCGCTGCAAGGTGCGACGATGCATGCCC AGGGCGCGGGCCGTGGCGGA
Product: 3-hydroxybutyrate dehydrogenase
Products: NA
Alternate protein names: BDH; 3-hydroxybutyrate dehydrogenase; 3-HBDH [H]
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MPAPSTPGSPRVAIVTGSSSGIGEAVVKQFCQEGLQVLAVDANPQGENVADAAGAVFYHADLTTSAACRGAVEEAIKRFG HVDILINNAGIQHVAPLETFPEAKWRQIIDLMLTAPFLLTQAAWPYMRQSSWGRIVNVASIHASVASPGKAAYVSAKHGL IGLTKTAALEGGELGITANAICPAYVRTPLVESQIADQARLNGMPEQEVIDNVMLKNAAIKRLIEPSEVAALVSYLASDK ASAVTGASWNMDLGWTAQ
Sequences:
>Translated_258_residues MPAPSTPGSPRVAIVTGSSSGIGEAVVKQFCQEGLQVLAVDANPQGENVADAAGAVFYHADLTTSAACRGAVEEAIKRFG HVDILINNAGIQHVAPLETFPEAKWRQIIDLMLTAPFLLTQAAWPYMRQSSWGRIVNVASIHASVASPGKAAYVSAKHGL IGLTKTAALEGGELGITANAICPAYVRTPLVESQIADQARLNGMPEQEVIDNVMLKNAAIKRLIEPSEVAALVSYLASDK ASAVTGASWNMDLGWTAQ >Mature_257_residues PAPSTPGSPRVAIVTGSSSGIGEAVVKQFCQEGLQVLAVDANPQGENVADAAGAVFYHADLTTSAACRGAVEEAIKRFGH VDILINNAGIQHVAPLETFPEAKWRQIIDLMLTAPFLLTQAAWPYMRQSSWGRIVNVASIHASVASPGKAAYVSAKHGLI GLTKTAALEGGELGITANAICPAYVRTPLVESQIADQARLNGMPEQEVIDNVMLKNAAIKRLIEPSEVAALVSYLASDKA SAVTGASWNMDLGWTAQ
Specific function: Unknown
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=251, Percent_Identity=31.4741035856574, Blast_Score=112, Evalue=4e-25, Organism=Homo sapiens, GI15277342, Length=259, Percent_Identity=30.1158301158301, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI59889578, Length=224, Percent_Identity=30.8035714285714, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI66933014, Length=229, Percent_Identity=30.5676855895196, Blast_Score=98, Evalue=7e-21, Organism=Homo sapiens, GI31542939, Length=196, Percent_Identity=29.0816326530612, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI4504505, Length=193, Percent_Identity=30.5699481865285, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI19923817, Length=265, Percent_Identity=29.811320754717, Blast_Score=86, Evalue=2e-17, Organism=Homo sapiens, GI126723750, Length=255, Percent_Identity=29.4117647058824, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI20149619, Length=206, Percent_Identity=29.6116504854369, Blast_Score=81, Evalue=9e-16, Organism=Homo sapiens, GI5031737, Length=247, Percent_Identity=29.1497975708502, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI126723191, Length=184, Percent_Identity=31.5217391304348, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI7706318, Length=207, Percent_Identity=28.0193236714976, Blast_Score=78, Evalue=6e-15, Organism=Homo sapiens, GI4758504, Length=238, Percent_Identity=28.9915966386555, Blast_Score=78, Evalue=7e-15, Organism=Homo sapiens, GI10190704, Length=254, Percent_Identity=29.5275590551181, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI40254992, Length=230, Percent_Identity=27.3913043478261, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI224922801, Length=169, Percent_Identity=27.2189349112426, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI142976729, Length=202, Percent_Identity=25.2475247524752, Blast_Score=71, Evalue=9e-13, Organism=Homo sapiens, GI33667109, Length=189, Percent_Identity=31.7460317460317, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI40807363, Length=202, Percent_Identity=25.7425742574257, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI157739938, Length=189, Percent_Identity=25.3968253968254, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI4503301, Length=197, Percent_Identity=27.4111675126904, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI210032110, Length=267, Percent_Identity=22.8464419475655, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI83715985, Length=235, Percent_Identity=27.2340425531915, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI7705925, Length=248, Percent_Identity=27.0161290322581, Blast_Score=66, Evalue=4e-11, Organism=Escherichia coli, GI87082100, Length=253, Percent_Identity=35.1778656126482, Blast_Score=141, Evalue=5e-35, Organism=Escherichia coli, GI1787335, Length=248, Percent_Identity=30.6451612903226, Blast_Score=120, Evalue=6e-29, Organism=Escherichia coli, GI1788459, Length=254, Percent_Identity=32.6771653543307, Blast_Score=118, Evalue=4e-28, Organism=Escherichia coli, GI1789208, Length=253, Percent_Identity=28.4584980237154, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI87082160, Length=250, Percent_Identity=29.6, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1790717, Length=247, Percent_Identity=26.3157894736842, Blast_Score=94, Evalue=6e-21, Organism=Escherichia coli, GI1787905, Length=242, Percent_Identity=29.7520661157025, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI2367365, Length=252, Percent_Identity=30.1587301587302, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1789057, Length=252, Percent_Identity=27.3809523809524, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1789378, Length=244, Percent_Identity=28.2786885245902, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1786812, Length=235, Percent_Identity=26.3829787234043, Blast_Score=71, Evalue=6e-14, Organism=Escherichia coli, GI2367175, Length=259, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1786701, Length=181, Percent_Identity=27.0718232044199, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1787820, Length=152, Percent_Identity=28.2894736842105, Blast_Score=63, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17555706, Length=260, Percent_Identity=32.3076923076923, Blast_Score=107, Evalue=7e-24, Organism=Caenorhabditis elegans, GI25147288, Length=256, Percent_Identity=29.296875, Blast_Score=105, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17560676, Length=268, Percent_Identity=29.1044776119403, Blast_Score=101, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17568967, Length=259, Percent_Identity=28.957528957529, Blast_Score=98, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17561402, Length=260, Percent_Identity=30.7692307692308, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71994600, Length=253, Percent_Identity=27.6679841897233, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI71994604, Length=257, Percent_Identity=28.0155642023346, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17538182, Length=243, Percent_Identity=27.5720164609054, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17564282, Length=199, Percent_Identity=28.1407035175879, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI193203117, Length=192, Percent_Identity=28.6458333333333, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI193203115, Length=190, Percent_Identity=28.4210526315789, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17538480, Length=277, Percent_Identity=29.6028880866426, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17508895, Length=199, Percent_Identity=26.1306532663317, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17560332, Length=263, Percent_Identity=27.7566539923954, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17559104, Length=268, Percent_Identity=27.6119402985075, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17562910, Length=267, Percent_Identity=29.2134831460674, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17562908, Length=277, Percent_Identity=27.0758122743682, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17544670, Length=275, Percent_Identity=27.6363636363636, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17562904, Length=261, Percent_Identity=28.735632183908, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17551412, Length=201, Percent_Identity=30.8457711442786, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17562906, Length=278, Percent_Identity=28.0575539568345, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17558006, Length=215, Percent_Identity=29.7674418604651, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17531453, Length=270, Percent_Identity=27.4074074074074, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17536651, Length=255, Percent_Identity=25.0980392156863, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17563726, Length=269, Percent_Identity=26.7657992565056, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17567345, Length=190, Percent_Identity=25.7894736842105, Blast_Score=66, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71982365, Length=188, Percent_Identity=25.531914893617, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17565030, Length=205, Percent_Identity=30.2439024390244, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17507613, Length=203, Percent_Identity=24.1379310344828, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI32563809, Length=203, Percent_Identity=24.1379310344828, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17562990, Length=271, Percent_Identity=27.6752767527675, Blast_Score=64, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17536025, Length=265, Percent_Identity=27.9245283018868, Blast_Score=64, Evalue=5e-11, Organism=Caenorhabditis elegans, GI115534694, Length=265, Percent_Identity=27.1698113207547, Blast_Score=64, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17560220, Length=213, Percent_Identity=24.8826291079812, Blast_Score=64, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=262, Percent_Identity=29.0076335877863, Blast_Score=110, Evalue=3e-25, Organism=Drosophila melanogaster, GI24639444, Length=252, Percent_Identity=32.5396825396825, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI18859837, Length=185, Percent_Identity=34.5945945945946, Blast_Score=107, Evalue=9e-24, Organism=Drosophila melanogaster, GI21355319, Length=262, Percent_Identity=32.0610687022901, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI23397609, Length=256, Percent_Identity=32.03125, Blast_Score=98, Evalue=7e-21, Organism=Drosophila melanogaster, GI24643142, Length=246, Percent_Identity=30.8943089430894, Blast_Score=97, Evalue=9e-21, Organism=Drosophila melanogaster, GI28571526, Length=257, Percent_Identity=29.9610894941634, Blast_Score=95, Evalue=4e-20, Organism=Drosophila melanogaster, GI21357041, Length=254, Percent_Identity=29.5275590551181, Blast_Score=92, Evalue=3e-19, Organism=Drosophila melanogaster, GI24644339, Length=256, Percent_Identity=29.296875, Blast_Score=91, Evalue=5e-19, Organism=Drosophila melanogaster, GI24644337, Length=178, Percent_Identity=33.7078651685393, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI17737361, Length=238, Percent_Identity=27.3109243697479, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI24641232, Length=221, Percent_Identity=27.6018099547511, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI17647419, Length=190, Percent_Identity=22.6315789473684, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI21358495, Length=194, Percent_Identity=27.8350515463918, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24649181, Length=187, Percent_Identity=24.5989304812834, Blast_Score=64, Evalue=7e-11, Organism=Drosophila melanogaster, GI21357673, Length=256, Percent_Identity=26.171875, Blast_Score=64, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011294 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.30 [H]
Molecular weight: Translated: 27100; Mature: 26969
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAPSTPGSPRVAIVTGSSSGIGEAVVKQFCQEGLQVLAVDANPQGENVADAAGAVFYHA CCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHCEEEEEC DLTTSAACRGAVEEAIKRFGHVDILINNAGIQHVAPLETFPEAKWRQIIDLMLTAPFLLT CCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHH QAAWPYMRQSSWGRIVNVASIHASVASPGKAAYVSAKHGLIGLTKTAALEGGELGITANA HHHCHHHHHCCCCCEEEHHHHHHHHCCCCCEEEEECCCCCEEEHHHHCCCCCCCCEECCC ICPAYVRTPLVESQIADQARLNGMPEQEVIDNVMLKNAAIKRLIEPSEVAALVSYLASDK CCHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC ASAVTGASWNMDLGWTAQ CCEEECCCCCCCCCCCCC >Mature Secondary Structure PAPSTPGSPRVAIVTGSSSGIGEAVVKQFCQEGLQVLAVDANPQGENVADAAGAVFYHA CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHCEEEEEC DLTTSAACRGAVEEAIKRFGHVDILINNAGIQHVAPLETFPEAKWRQIIDLMLTAPFLLT CCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHH QAAWPYMRQSSWGRIVNVASIHASVASPGKAAYVSAKHGLIGLTKTAALEGGELGITANA HHHCHHHHHCCCCCEEEHHHHHHHHCCCCCEEEEECCCCCEEEHHHHCCCCCCCCEECCC ICPAYVRTPLVESQIADQARLNGMPEQEVIDNVMLKNAAIKRLIEPSEVAALVSYLASDK CCHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC ASAVTGASWNMDLGWTAQ CCEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9922248; 11481431 [H]