Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
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Accession | NC_007963 |
Length | 3,696,649 |
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The map label for this gene is tar [H]
Identifier: 92113849
GI number: 92113849
Start: 1966985
End: 1969093
Strand: Direct
Name: tar [H]
Synonym: Csal_1726
Alternate gene names: 92113849
Gene position: 1966985-1969093 (Clockwise)
Preceding gene: 92113848
Following gene: 92113853
Centisome position: 53.21
GC content: 67.05
Gene sequence:
>2109_bases ATGAAGAAGAGTTTGAGCCTGCGGGCGATGCTGATCGGGCTGTTCGTGGCCGCCGTGCTGGGGGCGTTGATTCCGGCCGC GGCGGGATTTCTCTCCAACCAGCGGTTGATCGAGGCGCAGAGCCTGTTCACCGATGAAATACTGCCGCAGCAAGCGGCCA GCCGGGCCATGAGCGATGCGCTGACGCGCTACCGTGAGCGCCAGACGGACCTGCTCGCCGCCGAGAGCGAGGCGGCGCTG GAGGCCGCGCCCACCCAGGCCAGTGCCGACGAGCGCTTCATGGCAGGCCGCGAGCGTCTGGCATCGTTGATGCCGGACGA CGATCAGGCGCTGCTGGACGCCCTGGAGGCGGACTACGCCGACCTGAAGCAGGCCGATGCCGCCCTGGAAACGGTGCGCC GCGAGGACGTCGACTTGACCGCCTCCATGCGTACCCGCATCGCCGAGATGCAGGAAAAGATCGCCGAGGTGTTGACCGAC GCCGAGTCCATGGCCGGGCGTGCGACGCTCGCCGAAGTACGTCAGCAGCGGGCCCTGGCGCAGCGTATCCAGCGCATGCA GGAGCAGGGGCTGTCGATGGTGCCGATGTCGATGCTCGACTCGTTGATGGGGGAGCGCACCAATGTCGCGAGCCTGAGCG GCGACGTGCAGATGCTGGTGGCGCAGCTGGCCGACCAGGGGCGTCAGCTGATGCAGGTGGACAGCCATGATGCGCTGGTC GACCTGCGTTACAACCAGATCGCCCAGCAGATCTCGCGGATCGATCAGGCGCTGGCCGGCATCGAGGGCGCGATGGGCGC GACATCCGCCCAGCAGGAAAGCGCGGCACAGCTCGGCGAGGTGATCGAGGAACTCGACGCCTTGATGCTGACCGACGACA ACGCCGTCTATGCCCTGCGCGACCGTCAGCTGGCCTTGCGCGACCGCTCGAAGGAGGCGCTGGCCGGTGTCTCCCAGGCG ATGGATGGCATGCGCGAGAGTCTCGAGCGCGTCGAAGCCTATGCTACCCAGCGTGCCGACGCGGCGGCCGAGCAGGCCAC GGCCACGGCCCAGGCGGGACGCGTGCTGCAATTGGTGGTGCTGTTGATCGTCATCGTGATCCTGGCGGCCGTCGGCTGGC GCGTGATGACGCGGGTACTCAAGCCCATCGGTGAAATGCGCCGTCAGATGGAAAGCATCAGCGGCGCCGCCGGCCAGACC GGTGATCTGTCGATGCGCCTGAAGGTGCGCCATGGCGACGAGATCGGCCATACCGCGCAGGCCTTCAACCAGATGATGAT CACCTTCGAACGGCTCATCGCGCAGATTCGCGACGGTGCCGAGTCGGTGGCCTCGAGCAGCCGTCAGATCGCCTCCGGCA ATCAGGATCTGGCGCAACGCACCGACCAGCAGTCCTCGTCGCTGGCGGAAACGGCGGCAAGTCTCGAGCAGATCACGGCG ACCGTGAAACAGACCGCCGACTATGCGCATCAGGCCCGCGACATGAGCCAGCAGGTCGGGCAGCGTGCCCGCGATGCCGG GGACGTGGGCGAGCGGACGCAGCGTGCGATGCAGGAGATCCGCGAGTCCAGCGACAAGATCTCCACCATCGTGGAGGCCA TCGATGCCATCGCCTTCCAGACCAATCTGCTGGCCCTCAACGCCTCGGTCGAAGCGGCACGGGCCGGCGAGCACGGGCGC GGTTTCGCGGTGGTCGCCGACGAGGTGCGCCGTCTCGCCAGTCGCAGTGCCGATGAAGCCGAGCAGATTCGTGATCTGGT CAAGGACAGCATGACCAAGGTCGGCGAGGGCGCCGAGCTGGTCGAGGAAACCGGTGGGCATCTGCGCGAGATCGTCGGCA GCGTCGACAAGGTGACGCAGTTCGTCTCCGAGATCGCCGAGGCCACGCAGGAGCAGTCCACGGGGATCGACCAGATCAAC CAGGCCATCGCGCAGCTCGATCAGGTCACGCAGCAGAACGCTTCCCTGGTGCAGGACGCCTCGTCGGCCAGTCAGTCGCT GGACGCGCGCGCCAACGACATGCACGTACTGGTGGGACGCTTCAAGGTGAGCGAGGCGGCGTACGACGACGAGGACGAGA TCCCGCCGCGAGCGTTGCCCGCCACCTGA
Upstream 100 bases:
>100_bases GCAAACGATGCCGTGTGGGCGACACGGATTCATGACGGCCGCTTCGAGCCCGTCGATTGGTTCACCCTGCTCGATGAGCG CGCGGCCGAGGAGTAATCCC
Downstream 100 bases:
>100_bases GCGTGGCTTGCGGGGCGCGAGAGGCGCGCCCCGGTAAAGCGAAAAAAGACGGCCCCGCGGCCAAGGCAAGATGCCCTGGC CGCGGGGCCGTCTTTTTGGT
Product: methyl-accepting chemotaxis sensory transducer
Products: NA
Alternate protein names: MCP-II; Aspartate chemoreceptor protein [H]
Number of amino acids: Translated: 702; Mature: 702
Protein sequence:
>702_residues MKKSLSLRAMLIGLFVAAVLGALIPAAAGFLSNQRLIEAQSLFTDEILPQQAASRAMSDALTRYRERQTDLLAAESEAAL EAAPTQASADERFMAGRERLASLMPDDDQALLDALEADYADLKQADAALETVRREDVDLTASMRTRIAEMQEKIAEVLTD AESMAGRATLAEVRQQRALAQRIQRMQEQGLSMVPMSMLDSLMGERTNVASLSGDVQMLVAQLADQGRQLMQVDSHDALV DLRYNQIAQQISRIDQALAGIEGAMGATSAQQESAAQLGEVIEELDALMLTDDNAVYALRDRQLALRDRSKEALAGVSQA MDGMRESLERVEAYATQRADAAAEQATATAQAGRVLQLVVLLIVIVILAAVGWRVMTRVLKPIGEMRRQMESISGAAGQT GDLSMRLKVRHGDEIGHTAQAFNQMMITFERLIAQIRDGAESVASSSRQIASGNQDLAQRTDQQSSSLAETAASLEQITA TVKQTADYAHQARDMSQQVGQRARDAGDVGERTQRAMQEIRESSDKISTIVEAIDAIAFQTNLLALNASVEAARAGEHGR GFAVVADEVRRLASRSADEAEQIRDLVKDSMTKVGEGAELVEETGGHLREIVGSVDKVTQFVSEIAEATQEQSTGIDQIN QAIAQLDQVTQQNASLVQDASSASQSLDARANDMHVLVGRFKVSEAAYDDEDEIPPRALPAT
Sequences:
>Translated_702_residues MKKSLSLRAMLIGLFVAAVLGALIPAAAGFLSNQRLIEAQSLFTDEILPQQAASRAMSDALTRYRERQTDLLAAESEAAL EAAPTQASADERFMAGRERLASLMPDDDQALLDALEADYADLKQADAALETVRREDVDLTASMRTRIAEMQEKIAEVLTD AESMAGRATLAEVRQQRALAQRIQRMQEQGLSMVPMSMLDSLMGERTNVASLSGDVQMLVAQLADQGRQLMQVDSHDALV DLRYNQIAQQISRIDQALAGIEGAMGATSAQQESAAQLGEVIEELDALMLTDDNAVYALRDRQLALRDRSKEALAGVSQA MDGMRESLERVEAYATQRADAAAEQATATAQAGRVLQLVVLLIVIVILAAVGWRVMTRVLKPIGEMRRQMESISGAAGQT GDLSMRLKVRHGDEIGHTAQAFNQMMITFERLIAQIRDGAESVASSSRQIASGNQDLAQRTDQQSSSLAETAASLEQITA TVKQTADYAHQARDMSQQVGQRARDAGDVGERTQRAMQEIRESSDKISTIVEAIDAIAFQTNLLALNASVEAARAGEHGR GFAVVADEVRRLASRSADEAEQIRDLVKDSMTKVGEGAELVEETGGHLREIVGSVDKVTQFVSEIAEATQEQSTGIDQIN QAIAQLDQVTQQNASLVQDASSASQSLDARANDMHVLVGRFKVSEAAYDDEDEIPPRALPAT >Mature_702_residues MKKSLSLRAMLIGLFVAAVLGALIPAAAGFLSNQRLIEAQSLFTDEILPQQAASRAMSDALTRYRERQTDLLAAESEAAL EAAPTQASADERFMAGRERLASLMPDDDQALLDALEADYADLKQADAALETVRREDVDLTASMRTRIAEMQEKIAEVLTD AESMAGRATLAEVRQQRALAQRIQRMQEQGLSMVPMSMLDSLMGERTNVASLSGDVQMLVAQLADQGRQLMQVDSHDALV DLRYNQIAQQISRIDQALAGIEGAMGATSAQQESAAQLGEVIEELDALMLTDDNAVYALRDRQLALRDRSKEALAGVSQA MDGMRESLERVEAYATQRADAAAEQATATAQAGRVLQLVVLLIVIVILAAVGWRVMTRVLKPIGEMRRQMESISGAAGQT GDLSMRLKVRHGDEIGHTAQAFNQMMITFERLIAQIRDGAESVASSSRQIASGNQDLAQRTDQQSSSLAETAASLEQITA TVKQTADYAHQARDMSQQVGQRARDAGDVGERTQRAMQEIRESSDKISTIVEAIDAIAFQTNLLALNASVEAARAGEHGR GFAVVADEVRRLASRSADEAEQIRDLVKDSMTKVGEGAELVEETGGHLREIVGSVDKVTQFVSEIAEATQEQSTGIDQIN QAIAQLDQVTQQNASLVQDASSASQSLDARANDMHVLVGRFKVSEAAYDDEDEIPPRALPAT
Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 methyl-accepting transducer domain [H]
Homologues:
Organism=Escherichia coli, GI1788195, Length=331, Percent_Identity=43.8066465256798, Blast_Score=249, Evalue=4e-67, Organism=Escherichia coli, GI2367378, Length=294, Percent_Identity=46.5986394557823, Blast_Score=246, Evalue=4e-66, Organism=Escherichia coli, GI1787690, Length=343, Percent_Identity=41.9825072886297, Blast_Score=238, Evalue=8e-64, Organism=Escherichia coli, GI1788194, Length=344, Percent_Identity=40.9883720930233, Blast_Score=237, Evalue=2e-63, Organism=Escherichia coli, GI1789453, Length=317, Percent_Identity=35.3312302839117, Blast_Score=179, Evalue=5e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004090 - InterPro: IPR003122 - InterPro: IPR004091 - InterPro: IPR004089 - InterPro: IPR003660 [H]
Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]
EC number: NA
Molecular weight: Translated: 75935; Mature: 75935
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSLSLRAMLIGLFVAAVLGALIPAAAGFLSNQRLIEAQSLFTDEILPQQAASRAMSDA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LTRYRERQTDLLAAESEAALEAAPTQASADERFMAGRERLASLMPDDDQALLDALEADYA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH DLKQADAALETVRREDVDLTASMRTRIAEMQEKIAEVLTDAESMAGRATLAEVRQQRALA HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRIQRMQEQGLSMVPMSMLDSLMGERTNVASLSGDVQMLVAQLADQGRQLMQVDSHDALV HHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH DLRYNQIAQQISRIDQALAGIEGAMGATSAQQESAAQLGEVIEELDALMLTDDNAVYALR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEH DRQLALRDRSKEALAGVSQAMDGMRESLERVEAYATQRADAAAEQATATAQAGRVLQLVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLIVIVILAAVGWRVMTRVLKPIGEMRRQMESISGAAGQTGDLSMRLKVRHGDEIGHTAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHH AFNQMMITFERLIAQIRDGAESVASSSRQIASGNQDLAQRTDQQSSSLAETAASLEQITA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH TVKQTADYAHQARDMSQQVGQRARDAGDVGERTQRAMQEIRESSDKISTIVEAIDAIAFQ HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TNLLALNASVEAARAGEHGRGFAVVADEVRRLASRSADEAEQIRDLVKDSMTKVGEGAEL HHHHEECCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHH VEETGGHLREIVGSVDKVTQFVSEIAEATQEQSTGIDQINQAIAQLDQVTQQNASLVQDA HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH SSASQSLDARANDMHVLVGRFKVSEAAYDDEDEIPPRALPAT HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MKKSLSLRAMLIGLFVAAVLGALIPAAAGFLSNQRLIEAQSLFTDEILPQQAASRAMSDA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LTRYRERQTDLLAAESEAALEAAPTQASADERFMAGRERLASLMPDDDQALLDALEADYA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH DLKQADAALETVRREDVDLTASMRTRIAEMQEKIAEVLTDAESMAGRATLAEVRQQRALA HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRIQRMQEQGLSMVPMSMLDSLMGERTNVASLSGDVQMLVAQLADQGRQLMQVDSHDALV HHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH DLRYNQIAQQISRIDQALAGIEGAMGATSAQQESAAQLGEVIEELDALMLTDDNAVYALR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEH DRQLALRDRSKEALAGVSQAMDGMRESLERVEAYATQRADAAAEQATATAQAGRVLQLVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLIVIVILAAVGWRVMTRVLKPIGEMRRQMESISGAAGQTGDLSMRLKVRHGDEIGHTAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHH AFNQMMITFERLIAQIRDGAESVASSSRQIASGNQDLAQRTDQQSSSLAETAASLEQITA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH TVKQTADYAHQARDMSQQVGQRARDAGDVGERTQRAMQEIRESSDKISTIVEAIDAIAFQ HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TNLLALNASVEAARAGEHGRGFAVVADEVRRLASRSADEAEQIRDLVKDSMTKVGEGAEL HHHHEECCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHH VEETGGHLREIVGSVDKVTQFVSEIAEATQEQSTGIDQINQAIAQLDQVTQQNASLVQDA HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH SSASQSLDARANDMHVLVGRFKVSEAAYDDEDEIPPRALPAT HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 6305515; 9097040; 9278503; 9315712 [H]