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The map label for this gene is rfaB [C]

Identifier: 92113838

GI number: 92113838

Start: 1952992

End: 1954119

Strand: Direct

Name: rfaB [C]

Synonym: Csal_1715

Alternate gene names: 92113838

Gene position: 1952992-1954119 (Clockwise)

Preceding gene: 92113837

Following gene: 92113839

Centisome position: 52.83

GC content: 67.2

Gene sequence:

>1128_bases
ATGAAAGATGACGACAAGCGTATTGCAGTGTTCTTGCCTTCGCTGGCGGGCGGCGGCGCGGAACGCGTGATGGTGACGCT
CGCCAACGGGTTCGCCGCGCGCGGCGTGCCGGTGGACCTCGTCGTGGTCGCCGCCGAGGGGGCGTACCTGGAGGATGTCT
CGCCGCGCGTGCGTCTGGTGGAACTCGGTGCCTCGCGTGTGCTGTTCAGCCTGCCGGCGCTGGTGCGTTATCTGCGTCGC
GAGCGTCCTCACGCCTTATTGTCGGCGCTCAACCACGCCAACATCATCGCGCTCTGGGCGCGCAAGCTGGCGCGCACCCG
CACACGGCTGGTGGTCTCGGAGCGCAATACACTGTCGCGCGATCTGTCGAGCGACCGGTTCGAACGGGTGGTGCCGTGGC
TGATGCGTCTGAGCTATCCCACGGCGGATGCCATCGTCGCGGTCTCCGGCGGGGTGGCGGATGATCTTGCCCAGACGGCG
CGTCTGCCCCGGGAGCGCATCGATGTGGTCTACAACCCGATCAACTCCAACCTGCCTCGATTGTCCGAGGCGCCGGTCGT
GCATCCCTGGCTGGCCGAGGGCGAGCCGCCGGTGATCGTCGCGGCGGGGCGGCTGACCGTCCAGAAGGATTTCGCCACTC
TGGTCGAGGCCTTCGCGAGGGTGCGTCGAACGCACCGCGCCCGGCTGGTGATTCTTGGCGAGGGTGAACTGCGCGCCACG
CTCGAGGCCCGTATCGAAGAACTGGGGATTGCCGAGGATGTGGCCTTGCCCGGCTTCGTCGACAACCCTTATCCGTGGAT
GCGCCAGGCCTCGCTGTTCGTGCTGTCGTCGGCCTGGGAGGGATTCTGCAACGTGCTGGCCGAGGCCATGGCCTGCGGGA
CACCGGTAGTGAGCACCGATTGTCCCAGCGGCTCGGCGGAGATTCTCGAGAACGGCAAGTGGGGCCGCCTGGTGCCGGTG
GGTGATGCCTCGGCGTTGGCCCGGGCCATTGCCGCGACGCTCGATGACGAGACGCATCCCGACGTGCGCCACCGCGCACG
AAGCTTCGATCTGCATCAGGCGCTGCGCGGCTATCTTCGCGCGTTGCGCGTTCCCATGCCCATCTCTCGGAAGCAACACC
TTGGTTAG

Upstream 100 bases:

>100_bases
AACAGGTCCTGTGGGGAGCGACGGTTTATACCGTTAGCGCATTTTCGATGAACGTGGCGAACGTGCGCGATCGCGTTTTC
GCCAAGCGACGGACGGCCAA

Downstream 100 bases:

>100_bases
TCTGCTGCAGCAACGGCTCGCGCGTCGCGCGGGTGCCCGTGGGGACGAGACGCCGGGCGACGTGGCGATCGCGCTGTTTC
TGCCATCTCTGGAAGGCGGC

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MKDDDKRIAVFLPSLAGGGAERVMVTLANGFAARGVPVDLVVVAAEGAYLEDVSPRVRLVELGASRVLFSLPALVRYLRR
ERPHALLSALNHANIIALWARKLARTRTRLVVSERNTLSRDLSSDRFERVVPWLMRLSYPTADAIVAVSGGVADDLAQTA
RLPRERIDVVYNPINSNLPRLSEAPVVHPWLAEGEPPVIVAAGRLTVQKDFATLVEAFARVRRTHRARLVILGEGELRAT
LEARIEELGIAEDVALPGFVDNPYPWMRQASLFVLSSAWEGFCNVLAEAMACGTPVVSTDCPSGSAEILENGKWGRLVPV
GDASALARAIAATLDDETHPDVRHRARSFDLHQALRGYLRALRVPMPISRKQHLG

Sequences:

>Translated_375_residues
MKDDDKRIAVFLPSLAGGGAERVMVTLANGFAARGVPVDLVVVAAEGAYLEDVSPRVRLVELGASRVLFSLPALVRYLRR
ERPHALLSALNHANIIALWARKLARTRTRLVVSERNTLSRDLSSDRFERVVPWLMRLSYPTADAIVAVSGGVADDLAQTA
RLPRERIDVVYNPINSNLPRLSEAPVVHPWLAEGEPPVIVAAGRLTVQKDFATLVEAFARVRRTHRARLVILGEGELRAT
LEARIEELGIAEDVALPGFVDNPYPWMRQASLFVLSSAWEGFCNVLAEAMACGTPVVSTDCPSGSAEILENGKWGRLVPV
GDASALARAIAATLDDETHPDVRHRARSFDLHQALRGYLRALRVPMPISRKQHLG
>Mature_375_residues
MKDDDKRIAVFLPSLAGGGAERVMVTLANGFAARGVPVDLVVVAAEGAYLEDVSPRVRLVELGASRVLFSLPALVRYLRR
ERPHALLSALNHANIIALWARKLARTRTRLVVSERNTLSRDLSSDRFERVVPWLMRLSYPTADAIVAVSGGVADDLAQTA
RLPRERIDVVYNPINSNLPRLSEAPVVHPWLAEGEPPVIVAAGRLTVQKDFATLVEAFARVRRTHRARLVILGEGELRAT
LEARIEELGIAEDVALPGFVDNPYPWMRQASLFVLSSAWEGFCNVLAEAMACGTPVVSTDCPSGSAEILENGKWGRLVPV
GDASALARAIAATLDDETHPDVRHRARSFDLHQALRGYLRALRVPMPISRKQHLG

Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Escherichia coli, GI226510984, Length=382, Percent_Identity=22.2513089005236, Blast_Score=78, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 41079; Mature: 41079

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDDDKRIAVFLPSLAGGGAERVMVTLANGFAARGVPVDLVVVAAEGAYLEDVSPRVRLV
CCCCCCEEEEEECCCCCCCHHEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCEEEE
ELGASRVLFSLPALVRYLRRERPHALLSALNHANIIALWARKLARTRTRLVVSERNTLSR
HHCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEECCHHHHH
DLSSDRFERVVPWLMRLSYPTADAIVAVSGGVADDLAQTARLPRERIDVVYNPINSNLPR
HHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHCCHHHHHEEECCCCCCCCC
LSEAPVVHPWLAEGEPPVIVAAGRLTVQKDFATLVEAFARVRRTHRARLVILGEGELRAT
CCCCCCCCCHHCCCCCCEEEECCCEEEHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
LEARIEELGIAEDVALPGFVDNPYPWMRQASLFVLSSAWEGFCNVLAEAMACGTPVVSTD
HHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECC
CPSGSAEILENGKWGRLVPVGDASALARAIAATLDDETHPDVRHRARSFDLHQALRGYLR
CCCCCHHHHCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHH
ALRVPMPISRKQHLG
HHCCCCCCCCCCCCC
>Mature Secondary Structure
MKDDDKRIAVFLPSLAGGGAERVMVTLANGFAARGVPVDLVVVAAEGAYLEDVSPRVRLV
CCCCCCEEEEEECCCCCCCHHEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCEEEE
ELGASRVLFSLPALVRYLRRERPHALLSALNHANIIALWARKLARTRTRLVVSERNTLSR
HHCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEECCHHHHH
DLSSDRFERVVPWLMRLSYPTADAIVAVSGGVADDLAQTARLPRERIDVVYNPINSNLPR
HHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHCCHHHHHEEECCCCCCCCC
LSEAPVVHPWLAEGEPPVIVAAGRLTVQKDFATLVEAFARVRRTHRARLVILGEGELRAT
CCCCCCCCCHHCCCCCCEEEECCCEEEHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
LEARIEELGIAEDVALPGFVDNPYPWMRQASLFVLSSAWEGFCNVLAEAMACGTPVVSTD
HHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECC
CPSGSAEILENGKWGRLVPVGDASALARAIAATLDDETHPDVRHRARSFDLHQALRGYLR
CCCCCHHHHCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHH
ALRVPMPISRKQHLG
HHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]