Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
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Accession | NC_007963 |
Length | 3,696,649 |
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The map label for this gene is 92113837
Identifier: 92113837
GI number: 92113837
Start: 1951544
End: 1952995
Strand: Direct
Name: 92113837
Synonym: Csal_1714
Alternate gene names: NA
Gene position: 1951544-1952995 (Clockwise)
Preceding gene: 92113836
Following gene: 92113838
Centisome position: 52.79
GC content: 64.12
Gene sequence:
>1452_bases ATGCGAGACGCGTTCGAGGAGTCAACCTTGCTGATTCGCTATACCGCTTATTACGGCTTGGCGCGGGGTGTGCCGGGGCT GCTGAATTTCCTGGCGATCGCGATCTACACCCGGCTGCTGTCCCCCAGCGACTACGGGATCTACGCCCTGGTCGTGGTGT GGGTGGGGTTGGTCAATGTGGTGTGTTTTCAGTGGATCCGGCTGTCGCTGCTGCGCTTCTTTCCGGCACATCTGGAAGCG CCGCAGCGCCTGTTGAGTACCTTGCTGCTGGCCTATACCAGCGTGGCGTTGCTCACCGGTGTGGCGGGTGTAGGCGTGTT GCTGACGGTGAGCGATCCCGCGCTGCGTTCGCTGGTGTTCATCGCGGTACCGCTGGTGTGGGTGCAGGCCGGCTTCGAAC TCAGTCTCGAACTGATGCGCAGTCAGCTCAACCCGTTGCGCTACGGCCTGATGGCGGGCGTGCGGGCGATCATCGCGCTG GGCCTGGGCGTGTTGTTGATCACCTGGGGCTTCGGCGCCTTCGGGCCTTTGGTAGCGATGCTGGTGGGCATGCTCGTCGC CGTGGTGACGCTGGGAGCGTCGCTGTGGCGGGGAGCGCGCCCATCGCTGACGCTGATGCCGGACTTGAAGCCGCTGCTGG TCTACGGGCTGCCGCTGACCGCGACCTTCGCGCTGGAATTCGTGGTCTCCAGCTCGGATCGCTTTCTGCTCGCGGCGTTG CTGAACAACGAAGCGGTAGGGATCTACACCGCCGGCTATGACCTGGTTGCGCATGTCATCAATCTCTTGCTGGTGACGGT GAACCTGGCGGCGTATCCGCTGGTGGTGCGCGCGTTCGAGCAGCATGGTCGCGAGGCCGCCCACGAACAGCTCGATCGCA ACGGCAGCCTGCTGCTGCTGATCGCGATTCCGGTGACGCTCGGTTTCATCGTGCTGGCGCCGCAGATCGTCGCCCTGATG CTGGGCGAGGCGTTCCATGCCGGGGCCACGCAGCTGGTGCCGTGGGTCGCCCTGGCGATCTTCATGTGCTGCATTCGCGC CTTCCATTTTGATCTGGCGTTCCAGTTGAGCGAGAAGACCTTCTATCAGGTGTGGATCAACGGCGGGGCGGCGCTGGTCA ACGTGGCGCTCAACCTGCTGCTGATCCCGGCGTTCGGCCTGGTGGGAGCGGCCTACGCCACGGTGATCGCGTACGGCGTG GCGCTGGCGTTGAGCGTGTTGCTGGGACGACGGCTGTTCGCGATCTCGCTGATCACGCGCGACAACCTCAAGGTGCTGCT GAGCGGCGCCATCATGGTGGCCTGCCTGTGGCCGCTGCGCGAGGCGAGTGGTGCCTTGGCCCTGATGGAACAGGTCCTGT GGGGAGCGACGGTTTATACCGTTAGCGCATTTTCGATGAACGTGGCGAACGTGCGCGATCGCGTTTTCGCCAAGCGACGG ACGGCCAAATGA
Upstream 100 bases:
>100_bases CCACGGCGTACACCTATGGTTACTACAACTATTCCTACCGCTAATCCTTTCCTGATGCTGACCTTGCGTTCCGCCGAGCG GCCCTTGGGGGCCGTGAGGC
Downstream 100 bases:
>100_bases AAGATGACGACAAGCGTATTGCAGTGTTCTTGCCTTCGCTGGCGGGCGGCGGCGCGGAACGCGTGATGGTGACGCTCGCC AACGGGTTCGCCGCGCGCGG
Product: polysaccharide biosynthesis protein
Products: NA
Alternate protein names: Polysaccharide Export Protein
Number of amino acids: Translated: 483; Mature: 483
Protein sequence:
>483_residues MRDAFEESTLLIRYTAYYGLARGVPGLLNFLAIAIYTRLLSPSDYGIYALVVVWVGLVNVVCFQWIRLSLLRFFPAHLEA PQRLLSTLLLAYTSVALLTGVAGVGVLLTVSDPALRSLVFIAVPLVWVQAGFELSLELMRSQLNPLRYGLMAGVRAIIAL GLGVLLITWGFGAFGPLVAMLVGMLVAVVTLGASLWRGARPSLTLMPDLKPLLVYGLPLTATFALEFVVSSSDRFLLAAL LNNEAVGIYTAGYDLVAHVINLLLVTVNLAAYPLVVRAFEQHGREAAHEQLDRNGSLLLLIAIPVTLGFIVLAPQIVALM LGEAFHAGATQLVPWVALAIFMCCIRAFHFDLAFQLSEKTFYQVWINGGAALVNVALNLLLIPAFGLVGAAYATVIAYGV ALALSVLLGRRLFAISLITRDNLKVLLSGAIMVACLWPLREASGALALMEQVLWGATVYTVSAFSMNVANVRDRVFAKRR TAK
Sequences:
>Translated_483_residues MRDAFEESTLLIRYTAYYGLARGVPGLLNFLAIAIYTRLLSPSDYGIYALVVVWVGLVNVVCFQWIRLSLLRFFPAHLEA PQRLLSTLLLAYTSVALLTGVAGVGVLLTVSDPALRSLVFIAVPLVWVQAGFELSLELMRSQLNPLRYGLMAGVRAIIAL GLGVLLITWGFGAFGPLVAMLVGMLVAVVTLGASLWRGARPSLTLMPDLKPLLVYGLPLTATFALEFVVSSSDRFLLAAL LNNEAVGIYTAGYDLVAHVINLLLVTVNLAAYPLVVRAFEQHGREAAHEQLDRNGSLLLLIAIPVTLGFIVLAPQIVALM LGEAFHAGATQLVPWVALAIFMCCIRAFHFDLAFQLSEKTFYQVWINGGAALVNVALNLLLIPAFGLVGAAYATVIAYGV ALALSVLLGRRLFAISLITRDNLKVLLSGAIMVACLWPLREASGALALMEQVLWGATVYTVSAFSMNVANVRDRVFAKRR TAK >Mature_483_residues MRDAFEESTLLIRYTAYYGLARGVPGLLNFLAIAIYTRLLSPSDYGIYALVVVWVGLVNVVCFQWIRLSLLRFFPAHLEA PQRLLSTLLLAYTSVALLTGVAGVGVLLTVSDPALRSLVFIAVPLVWVQAGFELSLELMRSQLNPLRYGLMAGVRAIIAL GLGVLLITWGFGAFGPLVAMLVGMLVAVVTLGASLWRGARPSLTLMPDLKPLLVYGLPLTATFALEFVVSSSDRFLLAAL LNNEAVGIYTAGYDLVAHVINLLLVTVNLAAYPLVVRAFEQHGREAAHEQLDRNGSLLLLIAIPVTLGFIVLAPQIVALM LGEAFHAGATQLVPWVALAIFMCCIRAFHFDLAFQLSEKTFYQVWINGGAALVNVALNLLLIPAFGLVGAAYATVIAYGV ALALSVLLGRRLFAISLITRDNLKVLLSGAIMVACLWPLREASGALALMEQVLWGATVYTVSAFSMNVANVRDRVFAKRR TAK
Specific function: Unknown
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52199; Mature: 52199
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDAFEESTLLIRYTAYYGLARGVPGLLNFLAIAIYTRLLSPSDYGIYALVVVWVGLVNV CCCCCCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH VCFQWIRLSLLRFFPAHLEAPQRLLSTLLLAYTSVALLTGVAGVGVLLTVSDPALRSLVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHH IAVPLVWVQAGFELSLELMRSQLNPLRYGLMAGVRAIIALGLGVLLITWGFGAFGPLVAM HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH LVGMLVAVVTLGASLWRGARPSLTLMPDLKPLLVYGLPLTATFALEFVVSSSDRFLLAAL HHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHCCCCHHHHHHHHHHHCCCCCEEEHHH LNNEAVGIYTAGYDLVAHVINLLLVTVNLAAYPLVVRAFEQHGREAAHEQLDRNGSLLLL HCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCEEEE IAIPVTLGFIVLAPQIVALMLGEAFHAGATQLVPWVALAIFMCCIRAFHFDLAFQLSEKT EHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCE FYQVWINGGAALVNVALNLLLIPAFGLVGAAYATVIAYGVALALSVLLGRRLFAISLITR EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DNLKVLLSGAIMVACLWPLREASGALALMEQVLWGATVYTVSAFSMNVANVRDRVFAKRR CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHC TAK CCC >Mature Secondary Structure MRDAFEESTLLIRYTAYYGLARGVPGLLNFLAIAIYTRLLSPSDYGIYALVVVWVGLVNV CCCCCCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH VCFQWIRLSLLRFFPAHLEAPQRLLSTLLLAYTSVALLTGVAGVGVLLTVSDPALRSLVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHH IAVPLVWVQAGFELSLELMRSQLNPLRYGLMAGVRAIIALGLGVLLITWGFGAFGPLVAM HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH LVGMLVAVVTLGASLWRGARPSLTLMPDLKPLLVYGLPLTATFALEFVVSSSDRFLLAAL HHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHCCCCHHHHHHHHHHHCCCCCEEEHHH LNNEAVGIYTAGYDLVAHVINLLLVTVNLAAYPLVVRAFEQHGREAAHEQLDRNGSLLLL HCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCEEEE IAIPVTLGFIVLAPQIVALMLGEAFHAGATQLVPWVALAIFMCCIRAFHFDLAFQLSEKT EHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCE FYQVWINGGAALVNVALNLLLIPAFGLVGAAYATVIAYGVALALSVLLGRRLFAISLITR EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DNLKVLLSGAIMVACLWPLREASGALALMEQVLWGATVYTVSAFSMNVANVRDRVFAKRR CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHC TAK CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA