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The map label for this gene is rfaB [C]

Identifier: 92113839

GI number: 92113839

Start: 1954112

End: 1955284

Strand: Direct

Name: rfaB [C]

Synonym: Csal_1716

Alternate gene names: 92113839

Gene position: 1954112-1955284 (Clockwise)

Preceding gene: 92113838

Following gene: 92113840

Centisome position: 52.86

GC content: 68.37

Gene sequence:

>1173_bases
TTGGTTAGTCTGCTGCAGCAACGGCTCGCGCGTCGCGCGGGTGCCCGTGGGGACGAGACGCCGGGCGACGTGGCGATCGC
GCTGTTTCTGCCATCTCTGGAAGGCGGCGGGGCCGAGATCGTGATGGTGACGCTGGCCAACGGGCTTGCCGCGCAAGGCT
GGCGGGTGGACCTGGTGGTGGCGCATGCCACCGGCGCCTACGTGAACCGCGTCTCGCCGGCGGTGCGTCTGGTCGATCTG
CACGCCCCGCGTGTGCTCTACAGCGTGCCCGCGCTGGTGCGTTACCTGCGCCGCGAGCGCCCGCCGGTCCTGTTGTCGGC
TCTCAACTACGCCAATGTGGTCGCGCTGTGGGCCAACCGGCTGGCGGGCGTGGGCACGCGGGTGGTGGTCTCCGAGCACA
ATAACGTGACGCGCGACATGGGCTCCGAGCCCGCCAATCGGTCGTGGCTGATTCCACGGCTGATGCGACAAAGCTATCCC
TGGGCGAGCGGTATCGTGGCGGTTTCCAACGGCGTGGCCGAGGAACTGGCACGCACGCTGGCGATCCCCCGCGAGCGGAT
CGATGTCATCTACAACCCGGCAGTGACCGAGCGCCTGCGCGAGTTGAGCACCCTGCCGCTGGCGCATCCTTGGCTCGCAC
CGGGCGAGCCGCCGGTGATTCTCGCCGTGGGGCGACTGACCGCCCAGAAGGACTATCCCACCTTGATCCAAGCCTTCGCC
GCCTTGCGCGCGCATCGCGATGCGCGGCTGGTGATCCTCGGCGAGGGCGAGTTGCGCGGCACACTGGAGGCGATGGCCGC
GCGACTGGGGCTGGCGGATGTCATTGCCTTTCCGGGCTTCGTCGACAACCCCTACGCCTGGATGCGCCAGGCCGCGCTGT
TCGTGCTGTCGTCCGCCTGGGAGGGCTTCGGCAACGTGCTGGCCGAGGCCATGGCCTGTGGGACGCCGGTGATCAGCACC
GATTGTCCCAGCGGACCGGCGGAGATTCTGGAAAACGGCGCCTGGGGCCGGCTGGTACCGGTGGCCGATGTCGAGGCGCT
GTGCACGGCAATGCGCGAGGAACTGGACGGTGAGCGGGCGCGTCGCCCCGATGTCATCCAGCGTGCCCAGCATTTCGATC
TCGGGCAGGCATTGAGTGCCTATCTACACGTGATGCAACGCCAGAGCATCTGA

Upstream 100 bases:

>100_bases
GACGTGCGCCACCGCGCACGAAGCTTCGATCTGCATCAGGCGCTGCGCGGCTATCTTCGCGCGTTGCGCGTTCCCATGCC
CATCTCTCGGAAGCAACACC

Downstream 100 bases:

>100_bases
CATCAAGCGCGCCGAGCGCGACGTTATCGAGGCGAGTGATGAAACTACTGATACCTACTGAAGGCTCGTTTGGTTACAAG
GTGATGTGCCTGGTGCTGGC

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MVSLLQQRLARRAGARGDETPGDVAIALFLPSLEGGGAEIVMVTLANGLAAQGWRVDLVVAHATGAYVNRVSPAVRLVDL
HAPRVLYSVPALVRYLRRERPPVLLSALNYANVVALWANRLAGVGTRVVVSEHNNVTRDMGSEPANRSWLIPRLMRQSYP
WASGIVAVSNGVAEELARTLAIPRERIDVIYNPAVTERLRELSTLPLAHPWLAPGEPPVILAVGRLTAQKDYPTLIQAFA
ALRAHRDARLVILGEGELRGTLEAMAARLGLADVIAFPGFVDNPYAWMRQAALFVLSSAWEGFGNVLAEAMACGTPVIST
DCPSGPAEILENGAWGRLVPVADVEALCTAMREELDGERARRPDVIQRAQHFDLGQALSAYLHVMQRQSI

Sequences:

>Translated_390_residues
MVSLLQQRLARRAGARGDETPGDVAIALFLPSLEGGGAEIVMVTLANGLAAQGWRVDLVVAHATGAYVNRVSPAVRLVDL
HAPRVLYSVPALVRYLRRERPPVLLSALNYANVVALWANRLAGVGTRVVVSEHNNVTRDMGSEPANRSWLIPRLMRQSYP
WASGIVAVSNGVAEELARTLAIPRERIDVIYNPAVTERLRELSTLPLAHPWLAPGEPPVILAVGRLTAQKDYPTLIQAFA
ALRAHRDARLVILGEGELRGTLEAMAARLGLADVIAFPGFVDNPYAWMRQAALFVLSSAWEGFGNVLAEAMACGTPVIST
DCPSGPAEILENGAWGRLVPVADVEALCTAMREELDGERARRPDVIQRAQHFDLGQALSAYLHVMQRQSI
>Mature_390_residues
MVSLLQQRLARRAGARGDETPGDVAIALFLPSLEGGGAEIVMVTLANGLAAQGWRVDLVVAHATGAYVNRVSPAVRLVDL
HAPRVLYSVPALVRYLRRERPPVLLSALNYANVVALWANRLAGVGTRVVVSEHNNVTRDMGSEPANRSWLIPRLMRQSYP
WASGIVAVSNGVAEELARTLAIPRERIDVIYNPAVTERLRELSTLPLAHPWLAPGEPPVILAVGRLTAQKDYPTLIQAFA
ALRAHRDARLVILGEGELRGTLEAMAARLGLADVIAFPGFVDNPYAWMRQAALFVLSSAWEGFGNVLAEAMACGTPVIST
DCPSGPAEILENGAWGRLVPVADVEALCTAMREELDGERARRPDVIQRAQHFDLGQALSAYLHVMQRQSI

Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Escherichia coli, GI226510984, Length=278, Percent_Identity=24.8201438848921, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 42292; Mature: 42292

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSLLQQRLARRAGARGDETPGDVAIALFLPSLEGGGAEIVMVTLANGLAAQGWRVDLVV
CHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCEEEEEEE
AHATGAYVNRVSPAVRLVDLHAPRVLYSVPALVRYLRRERPPVLLSALNYANVVALWANR
EECCCHHHHHCCHHHEEEECCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHH
LAGVGTRVVVSEHNNVTRDMGSEPANRSWLIPRLMRQSYPWASGIVAVSNGVAEELARTL
HHCCCCEEEEECCCCHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHH
AIPRERIDVIYNPAVTERLRELSTLPLAHPWLAPGEPPVILAVGRLTAQKDYPTLIQAFA
HCCHHHHHEEECCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCHHCCCCCHHHHHHHH
ALRAHRDARLVILGEGELRGTLEAMAARLGLADVIAFPGFVDNPYAWMRQAALFVLSSAW
HHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
EGFGNVLAEAMACGTPVISTDCPSGPAEILENGAWGRLVPVADVEALCTAMREELDGERA
HHHHHHHHHHHHCCCCCEECCCCCCHHHHHCCCCCCCEECHHHHHHHHHHHHHHHCCHHC
RRPDVIQRAQHFDLGQALSAYLHVMQRQSI
CCCHHHHHHHHCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVSLLQQRLARRAGARGDETPGDVAIALFLPSLEGGGAEIVMVTLANGLAAQGWRVDLVV
CHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCEEEEEEE
AHATGAYVNRVSPAVRLVDLHAPRVLYSVPALVRYLRRERPPVLLSALNYANVVALWANR
EECCCHHHHHCCHHHEEEECCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHH
LAGVGTRVVVSEHNNVTRDMGSEPANRSWLIPRLMRQSYPWASGIVAVSNGVAEELARTL
HHCCCCEEEEECCCCHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHH
AIPRERIDVIYNPAVTERLRELSTLPLAHPWLAPGEPPVILAVGRLTAQKDYPTLIQAFA
HCCHHHHHEEECCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCHHCCCCCHHHHHHHH
ALRAHRDARLVILGEGELRGTLEAMAARLGLADVIAFPGFVDNPYAWMRQAALFVLSSAW
HHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
EGFGNVLAEAMACGTPVISTDCPSGPAEILENGAWGRLVPVADVEALCTAMREELDGERA
HHHHHHHHHHHHCCCCCEECCCCCCHHHHHCCCCCCCEECHHHHHHHHHHHHHHHCCHHC
RRPDVIQRAQHFDLGQALSAYLHVMQRQSI
CCCHHHHHHHHCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]