Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
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Accession | NC_007963 |
Length | 3,696,649 |
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The map label for this gene is 92113744
Identifier: 92113744
GI number: 92113744
Start: 1840099
End: 1841298
Strand: Direct
Name: 92113744
Synonym: Csal_1620
Alternate gene names: NA
Gene position: 1840099-1841298 (Clockwise)
Preceding gene: 92113743
Following gene: 92113747
Centisome position: 49.78
GC content: 72.92
Gene sequence:
>1200_bases ATGCGGTTGTCTCATTGGAGCTATGCAGTGGTGGTGGGCCTGTGCCTGGGGGCCGCCGGCAGCAAGGCGCTGGCGGCAGG GCCGCCGCTGGCGCCGGACATGGTGAACGCCCTGGAGTCGCTGCAGCAGCGCCTGCAGGACGACGGGGCCAGCCAGGACG AGATCGACGACGCCAAGGCGGCGGCACGCCGACTGCAAGGGGGCAATGCGGCGGACCGCTGGGCGCGGGCGCTATTCCTT CAACTGGCGGCCACCGGTGAAGCCCGGCGGGGGCGTGACGGCGCCGCCGCCGATCTGTATCGCCAGGCGCGGCGCATCGA CGGTGTCGACGGCGACTCGCGCCGGCGCTGGCTCGATCAGGAAGCTCGCCTGCGGCTGCGTGCCGGCCAGACCGCGCAAG GCGCCGAGCTGCTCGGCGAGTGGATCGAGCGTCACGGTGGCGACCGTGACAGCCTGTGGTTGATGGCGCAGGCGCAGGCG ACGCTGGAGCACTGGTCACAGGCCGCGAACTGGGTCGACCGTGCACGCCGCGCCGGTGGCATGAACGATACGCGTCGTGC CCTGGCGGCGAGCGTCTATCAGCATGCCGAGCGCTATGAGGCGGCGCTGGGATTGCTCGACACGGCGCTCGAGGGGAAGG GCGACGACCCCGATGCCTGGCGGCGCGCGGCGGCCCTGGCGCAGCGCATGCAGCGTCCCGGCCTGGCCGCCGCGTTGTGG GAAGCCGGTTGGCGGCGGGGGGCGCTGCAAGGGCGCGAGGCGCTCGAGCAGTTGATACGCCTGCACGTGGCGGGCGGTAC GCCGGCACGCGCCGCCGAGTACCTGCAGGCCGCATTCGAGGACGGTACCTTGCCCCGCGATGTCGAGCATCAGCGGCGCC TCGCCGAAGCCTGGACGGCGGCGCGCGCCCATCGCGAGGCGCTGTCGGCGTGGCGCACGCTGGCCGAACAGACCCGAGCC GCCGAGGACTGGCGGCAGCTCGGCGAACTGGCCTATGGATGGGGCGAATGGTCGACGGCGGTGGAGGCACTGCGCGAGGC TCGCGAGCAGGGCGCCGATCCCGCGCGAACCTGGCTGCTCGAAGGTGTGTCCCTGCTGGAACTGTCTCGCGAGGAAGACG CACGGCAGGCTTTCGAGGCGGCCCGCGACGCGGGCGCGTCGCAGGCCGAGGACTGGCTGGCATCGCTCGACGCCGACTGA
Upstream 100 bases:
>100_bases GCGGGCGGCACTGAAGGCGATCTCCGGCTGGCGGTTCCCGCGTGCGGATGCCCCGCGTGAAGCGCGTCAGCGTCTAGAAT TCCGCCTCAAGAGGTAGCGC
Downstream 100 bases:
>100_bases GGTCGGTGTCGCGCCGTTCTCAGCTCGCGCCGGCGTCGCAGGCGAGCTGCGCCCATACCGGCGCATGGTCCGAGGGCCGC TGAATGCCGCGCAGTTCGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MRLSHWSYAVVVGLCLGAAGSKALAAGPPLAPDMVNALESLQQRLQDDGASQDEIDDAKAAARRLQGGNAADRWARALFL QLAATGEARRGRDGAAADLYRQARRIDGVDGDSRRRWLDQEARLRLRAGQTAQGAELLGEWIERHGGDRDSLWLMAQAQA TLEHWSQAANWVDRARRAGGMNDTRRALAASVYQHAERYEAALGLLDTALEGKGDDPDAWRRAAALAQRMQRPGLAAALW EAGWRRGALQGREALEQLIRLHVAGGTPARAAEYLQAAFEDGTLPRDVEHQRRLAEAWTAARAHREALSAWRTLAEQTRA AEDWRQLGELAYGWGEWSTAVEALREAREQGADPARTWLLEGVSLLELSREEDARQAFEAARDAGASQAEDWLASLDAD
Sequences:
>Translated_399_residues MRLSHWSYAVVVGLCLGAAGSKALAAGPPLAPDMVNALESLQQRLQDDGASQDEIDDAKAAARRLQGGNAADRWARALFL QLAATGEARRGRDGAAADLYRQARRIDGVDGDSRRRWLDQEARLRLRAGQTAQGAELLGEWIERHGGDRDSLWLMAQAQA TLEHWSQAANWVDRARRAGGMNDTRRALAASVYQHAERYEAALGLLDTALEGKGDDPDAWRRAAALAQRMQRPGLAAALW EAGWRRGALQGREALEQLIRLHVAGGTPARAAEYLQAAFEDGTLPRDVEHQRRLAEAWTAARAHREALSAWRTLAEQTRA AEDWRQLGELAYGWGEWSTAVEALREAREQGADPARTWLLEGVSLLELSREEDARQAFEAARDAGASQAEDWLASLDAD >Mature_399_residues MRLSHWSYAVVVGLCLGAAGSKALAAGPPLAPDMVNALESLQQRLQDDGASQDEIDDAKAAARRLQGGNAADRWARALFL QLAATGEARRGRDGAAADLYRQARRIDGVDGDSRRRWLDQEARLRLRAGQTAQGAELLGEWIERHGGDRDSLWLMAQAQA TLEHWSQAANWVDRARRAGGMNDTRRALAASVYQHAERYEAALGLLDTALEGKGDDPDAWRRAAALAQRMQRPGLAAALW EAGWRRGALQGREALEQLIRLHVAGGTPARAAEYLQAAFEDGTLPRDVEHQRRLAEAWTAARAHREALSAWRTLAEQTRA AEDWRQLGELAYGWGEWSTAVEALREAREQGADPARTWLLEGVSLLELSREEDARQAFEAARDAGASQAEDWLASLDAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43844; Mature: 43844
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLSHWSYAVVVGLCLGAAGSKALAAGPPLAPDMVNALESLQQRLQDDGASQDEIDDAKA CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH AARRLQGGNAADRWARALFLQLAATGEARRGRDGAAADLYRQARRIDGVDGDSRRRWLDQ HHHHHCCCCHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCH EARLRLRAGQTAQGAELLGEWIERHGGDRDSLWLMAQAQATLEHWSQAANWVDRARRAGG HHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCC MNDTRRALAASVYQHAERYEAALGLLDTALEGKGDDPDAWRRAAALAQRMQRPGLAAALW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHH EAGWRRGALQGREALEQLIRLHVAGGTPARAAEYLQAAFEDGTLPRDVEHQRRLAEAWTA HHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH ARAHREALSAWRTLAEQTRAAEDWRQLGELAYGWGEWSTAVEALREAREQGADPARTWLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHH EGVSLLELSREEDARQAFEAARDAGASQAEDWLASLDAD HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC >Mature Secondary Structure MRLSHWSYAVVVGLCLGAAGSKALAAGPPLAPDMVNALESLQQRLQDDGASQDEIDDAKA CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH AARRLQGGNAADRWARALFLQLAATGEARRGRDGAAADLYRQARRIDGVDGDSRRRWLDQ HHHHHCCCCHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCH EARLRLRAGQTAQGAELLGEWIERHGGDRDSLWLMAQAQATLEHWSQAANWVDRARRAGG HHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCC MNDTRRALAASVYQHAERYEAALGLLDTALEGKGDDPDAWRRAAALAQRMQRPGLAAALW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHH EAGWRRGALQGREALEQLIRLHVAGGTPARAAEYLQAAFEDGTLPRDVEHQRRLAEAWTA HHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH ARAHREALSAWRTLAEQTRAAEDWRQLGELAYGWGEWSTAVEALREAREQGADPARTWLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHH EGVSLLELSREEDARQAFEAARDAGASQAEDWLASLDAD HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA