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The map label for this gene is tonB [H]

Identifier: 92113743

GI number: 92113743

Start: 1839313

End: 1840095

Strand: Direct

Name: tonB [H]

Synonym: Csal_1619

Alternate gene names: 92113743

Gene position: 1839313-1840095 (Clockwise)

Preceding gene: 92113742

Following gene: 92113744

Centisome position: 49.76

GC content: 72.67

Gene sequence:

>783_bases
ATGAGGGCGATCGCGGGAGCCGCGGGCGGCGTGCTGATGGCGCTGGGCCTGTTCTATCTGCTGGCATTGCTGGTGGCGCC
GCCGGACGATGCGCGCGAGCCCATCGAGCAGCCGATGTCGGTGTCGCGTGTCGAGGCGCCAAAGGCGCAGGCACCGGCCC
CCCAGGCGGCCGCGCCCGATGCGCCGACGCCACCGGCCGACACGCCGCCGCCACCGCCGCCGTCGCCCGTGCCGGCGGCG
CAAAGCGACAGTGCGCTGGCGTTGCCCGAGCCCGAGCGCTCGGCACCGCCCACGCCGGAGGTGCCGCAAGAGACATTGCC
GGAGCTGGAGGAGATCGAACTCCAGCCCGAACCCATGCCGGAACCGCAGCCCGAGCCGGAGCCGGCTCCCGAGCCGGAAC
CGACGCCACAGCCGACCGAGTCCTCGTCGGCGAACGAGGCGTCCCAGGGCGAGAGCGAGGCCGCCTCGGCGGACCAGGCC
GCGGATAGCGGGGAGTCCAGCCAGGCGCCGTCGCAGGAAGTGGGGTCTCCCCAGCCCACCGAGCGCGTGCCGCCGGAATA
CCCGTCACGGGCGCAGCGTCGTGGCATCGAGGGGTACGTCGAAGTGCGCTTCACGATCCAGCCCGACGGCCGGGTGGATA
CCGATTCCTTGCGGGTCACCGAGGCCCAGCCGCGAAACGTGTTCGAGCGGGCGGCACTGAAGGCGATCTCCGGCTGGCGG
TTCCCGCGTGCGGATGCCCCGCGTGAAGCGCGTCAGCGTCTAGAATTCCGCCTCAAGAGGTAG

Upstream 100 bases:

>100_bases
ATCGCCAATCGACCACGGGGCTGCTCATCGAGGTCATGGATGCCATCCGCGACGCCGGCGTGGATGACGTCGCCGTGGCG
GCGGAGCGAGGCGCCGACGG

Downstream 100 bases:

>100_bases
CGCATGCGGTTGTCTCATTGGAGCTATGCAGTGGTGGTGGGCCTGTGCCTGGGGGCCGCCGGCAGCAAGGCGCTGGCGGC
AGGGCCGCCGCTGGCGCCGG

Product: TonB-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MRAIAGAAGGVLMALGLFYLLALLVAPPDDAREPIEQPMSVSRVEAPKAQAPAPQAAAPDAPTPPADTPPPPPPSPVPAA
QSDSALALPEPERSAPPTPEVPQETLPELEEIELQPEPMPEPQPEPEPAPEPEPTPQPTESSSANEASQGESEAASADQA
ADSGESSQAPSQEVGSPQPTERVPPEYPSRAQRRGIEGYVEVRFTIQPDGRVDTDSLRVTEAQPRNVFERAALKAISGWR
FPRADAPREARQRLEFRLKR

Sequences:

>Translated_260_residues
MRAIAGAAGGVLMALGLFYLLALLVAPPDDAREPIEQPMSVSRVEAPKAQAPAPQAAAPDAPTPPADTPPPPPPSPVPAA
QSDSALALPEPERSAPPTPEVPQETLPELEEIELQPEPMPEPQPEPEPAPEPEPTPQPTESSSANEASQGESEAASADQA
ADSGESSQAPSQEVGSPQPTERVPPEYPSRAQRRGIEGYVEVRFTIQPDGRVDTDSLRVTEAQPRNVFERAALKAISGWR
FPRADAPREARQRLEFRLKR
>Mature_260_residues
MRAIAGAAGGVLMALGLFYLLALLVAPPDDAREPIEQPMSVSRVEAPKAQAPAPQAAAPDAPTPPADTPPPPPPSPVPAA
QSDSALALPEPERSAPPTPEVPQETLPELEEIELQPEPMPEPQPEPEPAPEPEPTPQPTESSSANEASQGESEAASADQA
ADSGESSQAPSQEVGSPQPTERVPPEYPSRAQRRGIEGYVEVRFTIQPDGRVDTDSLRVTEAQPRNVFERAALKAISGWR
FPRADAPREARQRLEFRLKR

Specific function: Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requirin

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003538
- InterPro:   IPR006260 [H]

Pfam domain/function: PF03544 TonB [H]

EC number: NA

Molecular weight: Translated: 27730; Mature: 27730

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAIAGAAGGVLMALGLFYLLALLVAPPDDAREPIEQPMSVSRVEAPKAQAPAPQAAAPD
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
APTPPADTPPPPPPSPVPAAQSDSALALPEPERSAPPTPEVPQETLPELEEIELQPEPMP
CCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHCHHHHCCCCCCCCC
EPQPEPEPAPEPEPTPQPTESSSANEASQGESEAASADQAADSGESSQAPSQEVGSPQPT
CCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHCCCCCCCCCHHHCCCCCCC
ERVPPEYPSRAQRRGIEGYVEVRFTIQPDGRVDTDSLRVTEAQPRNVFERAALKAISGWR
CCCCCCCCCHHHHCCCCEEEEEEEEECCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCC
FPRADAPREARQRLEFRLKR
CCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MRAIAGAAGGVLMALGLFYLLALLVAPPDDAREPIEQPMSVSRVEAPKAQAPAPQAAAPD
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
APTPPADTPPPPPPSPVPAAQSDSALALPEPERSAPPTPEVPQETLPELEEIELQPEPMP
CCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHCHHHHCCCCCCCCC
EPQPEPEPAPEPEPTPQPTESSSANEASQGESEAASADQAADSGESSQAPSQEVGSPQPT
CCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHCCCCCCCCCHHHCCCCCCC
ERVPPEYPSRAQRRGIEGYVEVRFTIQPDGRVDTDSLRVTEAQPRNVFERAALKAISGWR
CCCCCCCCCHHHHCCCCEEEEEEEEECCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCC
FPRADAPREARQRLEFRLKR
CCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8370545 [H]