| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is rhlB [H]
Identifier: 92113747
GI number: 92113747
Start: 1842626
End: 1843900
Strand: Direct
Name: rhlB [H]
Synonym: Csal_1623
Alternate gene names: 92113747
Gene position: 1842626-1843900 (Clockwise)
Preceding gene: 92113744
Following gene: 92113748
Centisome position: 49.85
GC content: 65.18
Gene sequence:
>1275_bases ATGAGCGAGTCGGACAAAACCTCAGCACCGGCCCAGAACCGCAAACCGAAACGTCGGCGTCGCAAACCGCGCCGCTCGCA ATCCCAGTGGGACATCAAGCAGTTTCAGGTGCCGCCGGTCGCGGGGAAGTGGCGTTTCCACGATTTCGACCTGCCCGTGC CGTTGATGCGCGCGATCCATGCCCTAGGGTTCGAGTATTGCACGCCGATCCAGGCCGAGGCCCTGGCCAAGACCCTGCTG GGCGGGGACGTGGTCGGCAAGGCCCAGACCGGCACCGGCAAGACCGCGGCCTTCCTGATCTCGATCCTGGCCTACTTCCT CGAGGAGAAGGCACCCGACGGTCAGAAGCCGGGGGCGCCGCGTGCGCTGATCGTGGCGCCGACCCGGGAGCTGGCGCTGC AGATCGAGAAGGACGCCAAGGCCCTGGCACGCTTCACCTCGCTCAACGTCGCCAGCGTCGTGGGCGGCATGGACTATCAG AAGCAGCGTGACCAGCTGGGCCGCAAGGTCGATGTGCTGGTCGCTACGCCTGGGCGCCTGCTCGACTTCCACGAGAAGCG CGACGTCGACCTGACGCAGACCGAAGTGCTGGTGCTCGACGAAGCGGATCGCATGCTGTCGATGGGCTTCATCCCCGATG TCAAGCGCATCGTGCGGCATACGCCCAAGGCCGAGGAGCGTCAGACCTTCCTGTTCTCGGCGACCTTCAGCCAGGACATC CTCAACCTCGCCAATCAGTGGACGCACGATGCCGCGCATGTCGAGATCGAGGTCAGCCTCGAGAATGCCGCCAACATCGA TCAGCGGGTCTATCTGGTGAGCGACAGCGACAAGCAGCGCCTGCTGGTCAATCTGCTCAACCAGGAGAACATGGAGCGCG TGATCGTCTTCGGCAATCGTCGCGACCTGGTGCGCAACCTCGACAGCGAGCTGCGCAAGGCGGGGATCAACGTGGCGATG CTGTCCGGCGACGTGCCGCAGAACACGCGCATCACGACCCTCGACAAGTTCCGCAACGGCGAGGTGGACGTGCTGGTGGC CACGGACGTGGCAGGACGCGGCATCCACATCGACGATGTCAGCCATGTGGTGAACTACACCCTGCCCGAGGATCCCGAGG ACTACGTGCACCGCATCGGACGCACGGGACGTGCCGGCGCGGAGGGCGTGTCGATCAGCTTCGTCGGCGAGGAAGACGCC TTCGCCCTGCCGGGGATCGAGTCCTACATCGGCGACAAGCTGCCGTGCCAGCATCCCCCCGACGGGCTGCTTTGA
Upstream 100 bases:
>100_bases ATCCAGCTCGGCTGAACGACGGCCGTGGCGCGCGCCGGGAGGCGGGTGAGCGCGCTGGATTCATGCATTCCGTACGAATA TTGGACAGACATAGAAGCCT
Downstream 100 bases:
>100_bases CCCTTGGCCGAGACGACGGATAACGGGCTCGACAGCGAGCTCAAGGCGACGATTCAGACGGCCTATCGCCGGGTGCTCGA CTCGCTCGAGCTGACCCCGC
Product: DEAD/DEAH box helicase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 424; Mature: 423
Protein sequence:
>424_residues MSESDKTSAPAQNRKPKRRRRKPRRSQSQWDIKQFQVPPVAGKWRFHDFDLPVPLMRAIHALGFEYCTPIQAEALAKTLL GGDVVGKAQTGTGKTAAFLISILAYFLEEKAPDGQKPGAPRALIVAPTRELALQIEKDAKALARFTSLNVASVVGGMDYQ KQRDQLGRKVDVLVATPGRLLDFHEKRDVDLTQTEVLVLDEADRMLSMGFIPDVKRIVRHTPKAEERQTFLFSATFSQDI LNLANQWTHDAAHVEIEVSLENAANIDQRVYLVSDSDKQRLLVNLLNQENMERVIVFGNRRDLVRNLDSELRKAGINVAM LSGDVPQNTRITTLDKFRNGEVDVLVATDVAGRGIHIDDVSHVVNYTLPEDPEDYVHRIGRTGRAGAEGVSISFVGEEDA FALPGIESYIGDKLPCQHPPDGLL
Sequences:
>Translated_424_residues MSESDKTSAPAQNRKPKRRRRKPRRSQSQWDIKQFQVPPVAGKWRFHDFDLPVPLMRAIHALGFEYCTPIQAEALAKTLL GGDVVGKAQTGTGKTAAFLISILAYFLEEKAPDGQKPGAPRALIVAPTRELALQIEKDAKALARFTSLNVASVVGGMDYQ KQRDQLGRKVDVLVATPGRLLDFHEKRDVDLTQTEVLVLDEADRMLSMGFIPDVKRIVRHTPKAEERQTFLFSATFSQDI LNLANQWTHDAAHVEIEVSLENAANIDQRVYLVSDSDKQRLLVNLLNQENMERVIVFGNRRDLVRNLDSELRKAGINVAM LSGDVPQNTRITTLDKFRNGEVDVLVATDVAGRGIHIDDVSHVVNYTLPEDPEDYVHRIGRTGRAGAEGVSISFVGEEDA FALPGIESYIGDKLPCQHPPDGLL >Mature_423_residues SESDKTSAPAQNRKPKRRRRKPRRSQSQWDIKQFQVPPVAGKWRFHDFDLPVPLMRAIHALGFEYCTPIQAEALAKTLLG GDVVGKAQTGTGKTAAFLISILAYFLEEKAPDGQKPGAPRALIVAPTRELALQIEKDAKALARFTSLNVASVVGGMDYQK QRDQLGRKVDVLVATPGRLLDFHEKRDVDLTQTEVLVLDEADRMLSMGFIPDVKRIVRHTPKAEERQTFLFSATFSQDIL NLANQWTHDAAHVEIEVSLENAANIDQRVYLVSDSDKQRLLVNLLNQENMERVIVFGNRRDLVRNLDSELRKAGINVAML SGDVPQNTRITTLDKFRNGEVDVLVATDVAGRGIHIDDVSHVVNYTLPEDPEDYVHRIGRTGRAGAEGVSISFVGEEDAF ALPGIESYIGDKLPCQHPPDGLL
Specific function: Can carry out ATP-dependent unwinding of double stranded RNA. Has a role in RNA decay. Involved in the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI41327771, Length=412, Percent_Identity=36.4077669902913, Blast_Score=250, Evalue=2e-66, Organism=Homo sapiens, GI224593278, Length=367, Percent_Identity=36.7847411444142, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI87196351, Length=368, Percent_Identity=37.7717391304348, Blast_Score=228, Evalue=7e-60, Organism=Homo sapiens, GI301171467, Length=368, Percent_Identity=37.7717391304348, Blast_Score=228, Evalue=8e-60, Organism=Homo sapiens, GI301171475, Length=368, Percent_Identity=37.7717391304348, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI169881239, Length=368, Percent_Identity=37.5, Blast_Score=226, Evalue=3e-59, Organism=Homo sapiens, GI13514809, Length=368, Percent_Identity=37.5, Blast_Score=226, Evalue=3e-59, Organism=Homo sapiens, GI222352149, Length=347, Percent_Identity=37.1757925072046, Blast_Score=225, Evalue=7e-59, Organism=Homo sapiens, GI148613856, Length=353, Percent_Identity=35.9773371104816, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI38201710, Length=353, Percent_Identity=35.9773371104816, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI262118318, Length=355, Percent_Identity=38.0281690140845, Blast_Score=223, Evalue=4e-58, Organism=Homo sapiens, GI4758138, Length=353, Percent_Identity=36.5439093484419, Blast_Score=222, Evalue=6e-58, Organism=Homo sapiens, GI216548263, Length=355, Percent_Identity=38.0281690140845, Blast_Score=221, Evalue=9e-58, Organism=Homo sapiens, GI262231852, Length=355, Percent_Identity=38.0281690140845, Blast_Score=221, Evalue=9e-58, Organism=Homo sapiens, GI13518015, Length=355, Percent_Identity=38.0281690140845, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI20149629, Length=371, Percent_Identity=35.5795148247978, Blast_Score=219, Evalue=5e-57, Organism=Homo sapiens, GI21071032, Length=368, Percent_Identity=36.1413043478261, Blast_Score=218, Evalue=8e-57, Organism=Homo sapiens, GI7661920, Length=378, Percent_Identity=34.6560846560847, Blast_Score=218, Evalue=1e-56, Organism=Homo sapiens, GI41327773, Length=355, Percent_Identity=35.4929577464789, Blast_Score=210, Evalue=2e-54, Organism=Homo sapiens, GI45446747, Length=367, Percent_Identity=35.4223433242507, Blast_Score=203, Evalue=2e-52, Organism=Homo sapiens, GI45446743, Length=367, Percent_Identity=35.4223433242507, Blast_Score=203, Evalue=2e-52, Organism=Homo sapiens, GI31542656, Length=377, Percent_Identity=35.0132625994695, Blast_Score=201, Evalue=8e-52, Organism=Homo sapiens, GI50659095, Length=398, Percent_Identity=32.4120603015075, Blast_Score=199, Evalue=3e-51, Organism=Homo sapiens, GI188035877, Length=355, Percent_Identity=35.4929577464789, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI55749865, Length=361, Percent_Identity=31.8559556786704, Blast_Score=196, Evalue=3e-50, Organism=Homo sapiens, GI13129006, Length=376, Percent_Identity=32.4468085106383, Blast_Score=192, Evalue=6e-49, Organism=Homo sapiens, GI51094101, Length=383, Percent_Identity=31.331592689295, Blast_Score=190, Evalue=2e-48, Organism=Homo sapiens, GI164419743, Length=383, Percent_Identity=31.331592689295, Blast_Score=190, Evalue=2e-48, Organism=Homo sapiens, GI21040371, Length=358, Percent_Identity=33.2402234636872, Blast_Score=190, Evalue=3e-48, Organism=Homo sapiens, GI83700235, Length=370, Percent_Identity=35.6756756756757, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI4758112, Length=358, Percent_Identity=31.2849162011173, Blast_Score=186, Evalue=4e-47, Organism=Homo sapiens, GI18375623, Length=358, Percent_Identity=31.2849162011173, Blast_Score=186, Evalue=4e-47, Organism=Homo sapiens, GI164664518, Length=371, Percent_Identity=32.3450134770889, Blast_Score=186, Evalue=5e-47, Organism=Homo sapiens, GI41327776, Length=371, Percent_Identity=32.6145552560647, Blast_Score=185, Evalue=6e-47, Organism=Homo sapiens, GI4503529, Length=371, Percent_Identity=35.0404312668464, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI6005743, Length=371, Percent_Identity=32.8840970350404, Blast_Score=175, Evalue=6e-44, Organism=Homo sapiens, GI8922886, Length=371, Percent_Identity=32.8840970350404, Blast_Score=175, Evalue=8e-44, Organism=Homo sapiens, GI9506931, Length=399, Percent_Identity=30.3258145363409, Blast_Score=171, Evalue=9e-43, Organism=Homo sapiens, GI41327779, Length=398, Percent_Identity=34.1708542713568, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI13514831, Length=363, Percent_Identity=32.2314049586777, Blast_Score=171, Evalue=2e-42, Organism=Homo sapiens, GI38327634, Length=335, Percent_Identity=33.7313432835821, Blast_Score=168, Evalue=7e-42, Organism=Homo sapiens, GI62241022, Length=348, Percent_Identity=33.6206896551724, Blast_Score=166, Evalue=3e-41, Organism=Homo sapiens, GI38569503, Length=376, Percent_Identity=32.7127659574468, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI38569505, Length=376, Percent_Identity=32.7127659574468, Blast_Score=163, Evalue=3e-40, Organism=Homo sapiens, GI62241024, Length=348, Percent_Identity=32.7586206896552, Blast_Score=162, Evalue=5e-40, Organism=Homo sapiens, GI164419732, Length=375, Percent_Identity=31.4666666666667, Blast_Score=162, Evalue=5e-40, Organism=Homo sapiens, GI256773275, Length=440, Percent_Identity=31.5909090909091, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI9966805, Length=320, Percent_Identity=33.125, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI256223453, Length=392, Percent_Identity=28.0612244897959, Blast_Score=155, Evalue=9e-38, Organism=Homo sapiens, GI17505907, Length=418, Percent_Identity=27.7511961722488, Blast_Score=154, Evalue=1e-37, Organism=Homo sapiens, GI4826686, Length=339, Percent_Identity=29.7935103244838, Blast_Score=132, Evalue=5e-31, Organism=Homo sapiens, GI154759257, Length=407, Percent_Identity=28.009828009828, Blast_Score=125, Evalue=9e-29, Organism=Homo sapiens, GI20336298, Length=217, Percent_Identity=31.7972350230415, Blast_Score=108, Evalue=6e-24, Organism=Escherichia coli, GI1790214, Length=381, Percent_Identity=46.7191601049869, Blast_Score=336, Evalue=2e-93, Organism=Escherichia coli, GI1787016, Length=373, Percent_Identity=42.3592493297587, Blast_Score=278, Evalue=5e-76, Organism=Escherichia coli, GI87082221, Length=383, Percent_Identity=39.1644908616188, Blast_Score=249, Evalue=2e-67, Organism=Escherichia coli, GI1788930, Length=355, Percent_Identity=42.8169014084507, Blast_Score=246, Evalue=2e-66, Organism=Escherichia coli, GI1787605, Length=375, Percent_Identity=39.2, Blast_Score=227, Evalue=1e-60, Organism=Caenorhabditis elegans, GI32565321, Length=415, Percent_Identity=36.144578313253, Blast_Score=244, Evalue=7e-65, Organism=Caenorhabditis elegans, GI71987143, Length=369, Percent_Identity=36.8563685636856, Blast_Score=234, Evalue=7e-62, Organism=Caenorhabditis elegans, GI17555296, Length=370, Percent_Identity=37.2972972972973, Blast_Score=234, Evalue=8e-62, Organism=Caenorhabditis elegans, GI17510307, Length=368, Percent_Identity=37.7717391304348, Blast_Score=226, Evalue=2e-59, Organism=Caenorhabditis elegans, GI71995514, Length=368, Percent_Identity=37.7717391304348, Blast_Score=226, Evalue=2e-59, Organism=Caenorhabditis elegans, GI17510309, Length=368, Percent_Identity=37.7717391304348, Blast_Score=226, Evalue=3e-59, Organism=Caenorhabditis elegans, GI71995718, Length=369, Percent_Identity=36.5853658536585, Blast_Score=216, Evalue=1e-56, Organism=Caenorhabditis elegans, GI115533224, Length=355, Percent_Identity=37.1830985915493, Blast_Score=216, Evalue=2e-56, Organism=Caenorhabditis elegans, GI17552642, Length=358, Percent_Identity=36.8715083798883, Blast_Score=215, Evalue=4e-56, Organism=Caenorhabditis elegans, GI17510559, Length=396, Percent_Identity=33.8383838383838, Blast_Score=212, Evalue=4e-55, Organism=Caenorhabditis elegans, GI71995724, Length=378, Percent_Identity=34.6560846560847, Blast_Score=209, Evalue=2e-54, Organism=Caenorhabditis elegans, GI17507121, Length=378, Percent_Identity=34.6560846560847, Blast_Score=209, Evalue=2e-54, Organism=Caenorhabditis elegans, GI86570094, Length=365, Percent_Identity=35.8904109589041, Blast_Score=208, Evalue=5e-54, Organism=Caenorhabditis elegans, GI17507877, Length=372, Percent_Identity=34.6774193548387, Blast_Score=207, Evalue=9e-54, Organism=Caenorhabditis elegans, GI17537549, Length=382, Percent_Identity=35.3403141361257, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI17507881, Length=387, Percent_Identity=34.3669250645995, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI17507879, Length=372, Percent_Identity=34.9462365591398, Blast_Score=202, Evalue=2e-52, Organism=Caenorhabditis elegans, GI17507945, Length=400, Percent_Identity=34, Blast_Score=197, Evalue=8e-51, Organism=Caenorhabditis elegans, GI17552114, Length=362, Percent_Identity=33.4254143646409, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI71999646, Length=388, Percent_Identity=33.7628865979381, Blast_Score=195, Evalue=3e-50, Organism=Caenorhabditis elegans, GI71999644, Length=388, Percent_Identity=33.7628865979381, Blast_Score=195, Evalue=4e-50, Organism=Caenorhabditis elegans, GI17509811, Length=370, Percent_Identity=34.5945945945946, Blast_Score=188, Evalue=6e-48, Organism=Caenorhabditis elegans, GI115532546, Length=382, Percent_Identity=32.9842931937173, Blast_Score=187, Evalue=7e-48, Organism=Caenorhabditis elegans, GI115532548, Length=382, Percent_Identity=32.7225130890052, Blast_Score=187, Evalue=1e-47, Organism=Caenorhabditis elegans, GI71982858, Length=367, Percent_Identity=31.3351498637602, Blast_Score=183, Evalue=2e-46, Organism=Caenorhabditis elegans, GI17505370, Length=341, Percent_Identity=36.0703812316716, Blast_Score=180, Evalue=2e-45, Organism=Caenorhabditis elegans, GI71990816, Length=368, Percent_Identity=35.3260869565217, Blast_Score=178, Evalue=5e-45, Organism=Caenorhabditis elegans, GI17507641, Length=392, Percent_Identity=33.6734693877551, Blast_Score=174, Evalue=7e-44, Organism=Caenorhabditis elegans, GI32564046, Length=352, Percent_Identity=34.0909090909091, Blast_Score=162, Evalue=2e-40, Organism=Caenorhabditis elegans, GI17536099, Length=391, Percent_Identity=29.156010230179, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17536101, Length=391, Percent_Identity=29.156010230179, Blast_Score=159, Evalue=4e-39, Organism=Caenorhabditis elegans, GI17536103, Length=391, Percent_Identity=29.156010230179, Blast_Score=155, Evalue=3e-38, Organism=Caenorhabditis elegans, GI193208216, Length=399, Percent_Identity=30.3258145363409, Blast_Score=154, Evalue=8e-38, Organism=Caenorhabditis elegans, GI17553716, Length=379, Percent_Identity=30.3430079155673, Blast_Score=154, Evalue=8e-38, Organism=Caenorhabditis elegans, GI25148203, Length=462, Percent_Identity=27.2727272727273, Blast_Score=152, Evalue=3e-37, Organism=Caenorhabditis elegans, GI193206561, Length=352, Percent_Identity=30.9659090909091, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI17508543, Length=384, Percent_Identity=28.6458333333333, Blast_Score=136, Evalue=2e-32, Organism=Caenorhabditis elegans, GI17556951, Length=345, Percent_Identity=28.9855072463768, Blast_Score=126, Evalue=2e-29, Organism=Caenorhabditis elegans, GI25148205, Length=354, Percent_Identity=27.1186440677966, Blast_Score=111, Evalue=9e-25, Organism=Caenorhabditis elegans, GI71982862, Length=212, Percent_Identity=32.0754716981132, Blast_Score=109, Evalue=2e-24, Organism=Caenorhabditis elegans, GI71997889, Length=362, Percent_Identity=29.5580110497238, Blast_Score=108, Evalue=7e-24, Organism=Caenorhabditis elegans, GI25148291, Length=330, Percent_Identity=25.4545454545455, Blast_Score=101, Evalue=8e-22, Organism=Caenorhabditis elegans, GI71987152, Length=92, Percent_Identity=51.0869565217391, Blast_Score=95, Evalue=7e-20, Organism=Saccharomyces cerevisiae, GI6325138, Length=362, Percent_Identity=38.6740331491713, Blast_Score=233, Evalue=6e-62, Organism=Saccharomyces cerevisiae, GI6321360, Length=350, Percent_Identity=40, Blast_Score=231, Evalue=2e-61, Organism=Saccharomyces cerevisiae, GI6324217, Length=359, Percent_Identity=37.0473537604457, Blast_Score=229, Evalue=5e-61, Organism=Saccharomyces cerevisiae, GI6324778, Length=386, Percent_Identity=37.3056994818653, Blast_Score=229, Evalue=6e-61, Organism=Saccharomyces cerevisiae, GI6321856, Length=371, Percent_Identity=37.466307277628, Blast_Score=229, Evalue=8e-61, Organism=Saccharomyces cerevisiae, GI6323021, Length=359, Percent_Identity=35.933147632312, Blast_Score=219, Evalue=5e-58, Organism=Saccharomyces cerevisiae, GI6320224, Length=379, Percent_Identity=34.0369393139842, Blast_Score=205, Evalue=9e-54, Organism=Saccharomyces cerevisiae, GI6320041, Length=371, Percent_Identity=33.1536388140162, Blast_Score=201, Evalue=2e-52, Organism=Saccharomyces cerevisiae, GI6322912, Length=398, Percent_Identity=33.9195979899498, Blast_Score=199, Evalue=5e-52, Organism=Saccharomyces cerevisiae, GI6322323, Length=398, Percent_Identity=33.9195979899498, Blast_Score=199, Evalue=5e-52, Organism=Saccharomyces cerevisiae, GI6323947, Length=359, Percent_Identity=35.3760445682451, Blast_Score=198, Evalue=1e-51, Organism=Saccharomyces cerevisiae, GI6324620, Length=449, Percent_Identity=31.8485523385301, Blast_Score=193, Evalue=5e-50, Organism=Saccharomyces cerevisiae, GI6321963, Length=384, Percent_Identity=34.375, Blast_Score=189, Evalue=6e-49, Organism=Saccharomyces cerevisiae, GI6320449, Length=379, Percent_Identity=35.0923482849604, Blast_Score=187, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6322427, Length=410, Percent_Identity=33.4146341463415, Blast_Score=184, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6320173, Length=427, Percent_Identity=29.7423887587822, Blast_Score=176, Evalue=5e-45, Organism=Saccharomyces cerevisiae, GI6320119, Length=389, Percent_Identity=30.5912596401028, Blast_Score=171, Evalue=3e-43, Organism=Saccharomyces cerevisiae, GI6319714, Length=398, Percent_Identity=29.8994974874372, Blast_Score=165, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6321111, Length=374, Percent_Identity=31.5508021390374, Blast_Score=162, Evalue=7e-41, Organism=Saccharomyces cerevisiae, GI6320400, Length=372, Percent_Identity=31.7204301075269, Blast_Score=162, Evalue=7e-41, Organism=Saccharomyces cerevisiae, GI6323306, Length=410, Percent_Identity=28.5365853658537, Blast_Score=154, Evalue=3e-38, Organism=Saccharomyces cerevisiae, GI6319618, Length=419, Percent_Identity=27.9236276849642, Blast_Score=150, Evalue=4e-37, Organism=Saccharomyces cerevisiae, GI6321267, Length=353, Percent_Identity=30.5949008498584, Blast_Score=132, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6322876, Length=425, Percent_Identity=27.2941176470588, Blast_Score=111, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6321374, Length=381, Percent_Identity=24.1469816272966, Blast_Score=82, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6324366, Length=168, Percent_Identity=29.1666666666667, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24584994, Length=417, Percent_Identity=35.7314148681055, Blast_Score=237, Evalue=1e-62, Organism=Drosophila melanogaster, GI24584399, Length=353, Percent_Identity=38.5269121813031, Blast_Score=237, Evalue=1e-62, Organism=Drosophila melanogaster, GI21356161, Length=359, Percent_Identity=38.7186629526462, Blast_Score=233, Evalue=2e-61, Organism=Drosophila melanogaster, GI18857967, Length=366, Percent_Identity=36.0655737704918, Blast_Score=227, Evalue=1e-59, Organism=Drosophila melanogaster, GI21355075, Length=367, Percent_Identity=37.0572207084469, Blast_Score=227, Evalue=1e-59, Organism=Drosophila melanogaster, GI28574962, Length=373, Percent_Identity=36.7292225201072, Blast_Score=226, Evalue=2e-59, Organism=Drosophila melanogaster, GI24662330, Length=358, Percent_Identity=37.4301675977654, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI24644479, Length=361, Percent_Identity=34.9030470914127, Blast_Score=221, Evalue=9e-58, Organism=Drosophila melanogaster, GI281361218, Length=362, Percent_Identity=35.6353591160221, Blast_Score=220, Evalue=1e-57, Organism=Drosophila melanogaster, GI24644481, Length=362, Percent_Identity=35.6353591160221, Blast_Score=220, Evalue=1e-57, Organism=Drosophila melanogaster, GI24644483, Length=362, Percent_Identity=35.6353591160221, Blast_Score=220, Evalue=1e-57, Organism=Drosophila melanogaster, GI24644487, Length=362, Percent_Identity=35.6353591160221, Blast_Score=220, Evalue=2e-57, Organism=Drosophila melanogaster, GI45551833, Length=362, Percent_Identity=35.6353591160221, Blast_Score=220, Evalue=2e-57, Organism=Drosophila melanogaster, GI24644485, Length=362, Percent_Identity=35.6353591160221, Blast_Score=220, Evalue=2e-57, Organism=Drosophila melanogaster, GI24585582, Length=373, Percent_Identity=35.656836461126, Blast_Score=216, Evalue=2e-56, Organism=Drosophila melanogaster, GI17985987, Length=371, Percent_Identity=37.1967654986523, Blast_Score=216, Evalue=2e-56, Organism=Drosophila melanogaster, GI24642151, Length=349, Percent_Identity=36.3896848137536, Blast_Score=212, Evalue=5e-55, Organism=Drosophila melanogaster, GI24645031, Length=378, Percent_Identity=34.1269841269841, Blast_Score=208, Evalue=7e-54, Organism=Drosophila melanogaster, GI17977678, Length=367, Percent_Identity=34.0599455040872, Blast_Score=203, Evalue=2e-52, Organism=Drosophila melanogaster, GI17136814, Length=381, Percent_Identity=34.6456692913386, Blast_Score=196, Evalue=2e-50, Organism=Drosophila melanogaster, GI24583281, Length=371, Percent_Identity=32.0754716981132, Blast_Score=187, Evalue=9e-48, Organism=Drosophila melanogaster, GI28575014, Length=368, Percent_Identity=33.9673913043478, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI24583279, Length=371, Percent_Identity=32.0754716981132, Blast_Score=187, Evalue=2e-47, Organism=Drosophila melanogaster, GI24582080, Length=369, Percent_Identity=33.8753387533875, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI24582078, Length=369, Percent_Identity=33.8753387533875, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI17136248, Length=369, Percent_Identity=33.8753387533875, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI24582075, Length=369, Percent_Identity=33.8753387533875, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI28571808, Length=350, Percent_Identity=34.5714285714286, Blast_Score=181, Evalue=7e-46, Organism=Drosophila melanogaster, GI28571809, Length=350, Percent_Identity=34.5714285714286, Blast_Score=181, Evalue=7e-46, Organism=Drosophila melanogaster, GI281365720, Length=328, Percent_Identity=35.3658536585366, Blast_Score=179, Evalue=3e-45, Organism=Drosophila melanogaster, GI24581954, Length=358, Percent_Identity=31.0055865921788, Blast_Score=173, Evalue=2e-43, Organism=Drosophila melanogaster, GI24581952, Length=358, Percent_Identity=31.0055865921788, Blast_Score=173, Evalue=2e-43, Organism=Drosophila melanogaster, GI24581956, Length=358, Percent_Identity=31.0055865921788, Blast_Score=173, Evalue=2e-43, Organism=Drosophila melanogaster, GI24643725, Length=404, Percent_Identity=29.2079207920792, Blast_Score=169, Evalue=4e-42, Organism=Drosophila melanogaster, GI20130173, Length=449, Percent_Identity=29.1759465478842, Blast_Score=166, Evalue=2e-41, Organism=Drosophila melanogaster, GI24666101, Length=368, Percent_Identity=33.695652173913, Blast_Score=164, Evalue=1e-40, Organism=Drosophila melanogaster, GI17647335, Length=361, Percent_Identity=29.3628808864266, Blast_Score=159, Evalue=4e-39, Organism=Drosophila melanogaster, GI24642822, Length=439, Percent_Identity=28.7015945330296, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI21355559, Length=372, Percent_Identity=31.7204301075269, Blast_Score=151, Evalue=9e-37, Organism=Drosophila melanogaster, GI19920478, Length=335, Percent_Identity=31.044776119403, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI24668515, Length=366, Percent_Identity=29.2349726775956, Blast_Score=127, Evalue=1e-29, Organism=Drosophila melanogaster, GI17136666, Length=382, Percent_Identity=27.7486910994764, Blast_Score=112, Evalue=5e-25, Organism=Drosophila melanogaster, GI24640164, Length=375, Percent_Identity=24.5333333333333, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI28571338, Length=283, Percent_Identity=28.2685512367491, Blast_Score=99, Evalue=5e-21, Organism=Drosophila melanogaster, GI18859659, Length=283, Percent_Identity=28.2685512367491, Blast_Score=99, Evalue=5e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 47184; Mature: 47053
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESDKTSAPAQNRKPKRRRRKPRRSQSQWDIKQFQVPPVAGKWRFHDFDLPVPLMRAIH CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHEECCCCCCCEEEECCCCCHHHHHHHH ALGFEYCTPIQAEALAKTLLGGDVVGKAQTGTGKTAAFLISILAYFLEEKAPDGQKPGAP HHCHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC RALIVAPTRELALQIEKDAKALARFTSLNVASVVGGMDYQKQRDQLGRKVDVLVATPGRL EEEEEECCHHHHEEEHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHCCCEEEEEEECCCHH LDFHEKRDVDLTQTEVLVLDEADRMLSMGFIPDVKRIVRHTPKAEERQTFLFSATFSQDI HCCHHCCCCCCCCEEEEEEECCHHHHHHCCCHHHHHHHHCCCCCHHCCEEEEEEHHHHHH LNLANQWTHDAAHVEIEVSLENAANIDQRVYLVSDSDKQRLLVNLLNQENMERVIVFGNR HHHHHHCCCCCEEEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCH RDLVRNLDSELRKAGINVAMLSGDVPQNTRITTLDKFRNGEVDVLVATDVAGRGIHIDDV HHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEHHHCCCCCEEEEEEECCCCCCEEHHHH SHVVNYTLPEDPEDYVHRIGRTGRAGAEGVSISFVGEEDAFALPGIESYIGDKLPCQHPP HHHHHCCCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCCEECCCHHHHHCCCCCCCCCC DGLL CCCC >Mature Secondary Structure SESDKTSAPAQNRKPKRRRRKPRRSQSQWDIKQFQVPPVAGKWRFHDFDLPVPLMRAIH CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHEECCCCCCCEEEECCCCCHHHHHHHH ALGFEYCTPIQAEALAKTLLGGDVVGKAQTGTGKTAAFLISILAYFLEEKAPDGQKPGAP HHCHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC RALIVAPTRELALQIEKDAKALARFTSLNVASVVGGMDYQKQRDQLGRKVDVLVATPGRL EEEEEECCHHHHEEEHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHCCCEEEEEEECCCHH LDFHEKRDVDLTQTEVLVLDEADRMLSMGFIPDVKRIVRHTPKAEERQTFLFSATFSQDI HCCHHCCCCCCCCEEEEEEECCHHHHHHCCCHHHHHHHHCCCCCHHCCEEEEEEHHHHHH LNLANQWTHDAAHVEIEVSLENAANIDQRVYLVSDSDKQRLLVNLLNQENMERVIVFGNR HHHHHHCCCCCEEEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCH RDLVRNLDSELRKAGINVAMLSGDVPQNTRITTLDKFRNGEVDVLVATDVAGRGIHIDDV HHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEHHHCCCCCEEEEEEECCCCCCEEHHHH SHVVNYTLPEDPEDYVHRIGRTGRAGAEGVSISFVGEEDAFALPGIESYIGDKLPCQHPP HHHHHCCCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCCEECCCHHHHHCCCCCCCCCC DGLL CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12534463 [H]