The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91789233

Identifier: 91789233

GI number: 91789233

Start: 3570142

End: 3571563

Strand: Direct

Name: 91789233

Synonym: Bpro_3377

Alternate gene names: NA

Gene position: 3570142-3571563 (Clockwise)

Preceding gene: 91789232

Following gene: 91789244

Centisome position: 68.65

GC content: 63.43

Gene sequence:

>1422_bases
ATGGCTATCAAACTCACACGACTGGACGGCGGGACAGTGGACCTTTCGCCGGAGGTCCTGCAGTCGTTCAAGGCCGCATT
CAAAGGCCAGGTGCTGACTGCGGATGACCCGGAATACGAGGAGTCGCGCAAGATCTGGAACGCGATGATCGATCGTCGCC
CTGGCCTGGTGGCTCGTTGCACCGGGACGGTCGATGTCGTGCAGGCCGTTCGGTTCGCGCGTCATCACGGGCTTCTCAGT
TCCGTGCGCGGCGGCGGTCACAATATCGCAGGGCTTGCGGTCTGCGAGGGCGGCCTCATGATCGACATGTCGCTGCTGAG
AGGCGTTTGGGTCGATCCAGTGCACCGCACGGCTCGCGCGCAAGCCGGCTGCACACTGGCCGACGTCGACCGCGAGACAC
AGCTGCACGGGCTCGCAGCCGTGCTCGGTTTTGTTTCTGCCACCGGGATTGCAGGCCTCACCGTCGGCGGCGGATTTGGC
TACCTCACGCGTCGCCACGGCTGGACCTGCGACAACGTGGTCTCGATGGAAGTGGTGACCGCCGGCGGCGACGTCTTGCG
TGTGTCTGCGGACGAGAATGAGGACCTGTTCTGGGCGCTGCGTGGCGGCAGCGGCAACTTCGGAATCGTCACATCCTTTG
AGTACCGACTCTTTGCCGTCGGCCCCGAAATCCTGGGAGGCGCGATCGCATGGCACGGCGACGACGCCAAGCAAGTTCTC
GACGCCTACCGTGAGTTCAGCGCCGGGGCGCCGCGCGAACTGACCAGCGTGGCTGTTCTGCGGATTGCGCCGCCGGCACC
TTGGCTCCCGAAGGATGTGCACGGCAAGCCGATCGTCGCCATCTTCGTCTGCTACTCCGGCAAGGTCGAAGACGGAGAAG
CATTGATCGCGCCGCTGCGCGGGCTTGGTCGGCCAGTGGCCGATATCATGACGCGTCGGCCCTATACGCAGATGCAGAGT
CTGCTTGATGCCACACAGCCCAAAGGACGGCGCTACTACTGGAAGTCACACTACCTGCCAGGTATCGATCGTCAGACCAT
TGACGTCGCCGTGGAGCATGCGGGCCGAATTCGATCGCCCCATTCGGCCATCCTCCTGTTCCAGATACAGGGTGCGCTGG
GCGAGCTGCCTGCCGGGTACTCGCCGGCAGGCAATCGAGACGCAGCCTATGTGCTGAACATCGCTGGCTCCTGGGAGAAG
CCGGGCGATGACGACATCAATATCAAGTGGGCGCGGGACTGCTTCGAAGCGACGCGCTCCTGCTCGACAGGCGGGGCATA
CATCAACTTCCTTACTGAGGACGAGGGCCAGGACCGCATCGAGGCCGCGTACGGCCGATCCAACCTGGACAGACTCGCGG
CGCTCAAGCGCAAGTACGACCCCGAAAACTTCTTCCGCCACACAAAGAGTGTCTCTGGTTGA

Upstream 100 bases:

>100_bases
GGACCAACCGACCCGTTCCGTCGCTCGAACACTTGCCAGGATGGCGGCCGGCAACCGGCAGTAAGACCCAAAATTTCATC
ACTCTTCCTGGAGATGACTC

Downstream 100 bases:

>100_bases
ACTGACCGACTTGATCGACGTTCTGCTTGTGTTGCGCGCGGCACACGACAGCGATGCCGCGTTTGAATGTGACGTGCCCG
GAGCGTGAAGTGCGGAGTGT

Product: FAD linked oxidase-like protein

Products: NA

Alternate protein names: 6-HDNO [H]

Number of amino acids: Translated: 473; Mature: 472

Protein sequence:

>473_residues
MAIKLTRLDGGTVDLSPEVLQSFKAAFKGQVLTADDPEYEESRKIWNAMIDRRPGLVARCTGTVDVVQAVRFARHHGLLS
SVRGGGHNIAGLAVCEGGLMIDMSLLRGVWVDPVHRTARAQAGCTLADVDRETQLHGLAAVLGFVSATGIAGLTVGGGFG
YLTRRHGWTCDNVVSMEVVTAGGDVLRVSADENEDLFWALRGGSGNFGIVTSFEYRLFAVGPEILGGAIAWHGDDAKQVL
DAYREFSAGAPRELTSVAVLRIAPPAPWLPKDVHGKPIVAIFVCYSGKVEDGEALIAPLRGLGRPVADIMTRRPYTQMQS
LLDATQPKGRRYYWKSHYLPGIDRQTIDVAVEHAGRIRSPHSAILLFQIQGALGELPAGYSPAGNRDAAYVLNIAGSWEK
PGDDDINIKWARDCFEATRSCSTGGAYINFLTEDEGQDRIEAAYGRSNLDRLAALKRKYDPENFFRHTKSVSG

Sequences:

>Translated_473_residues
MAIKLTRLDGGTVDLSPEVLQSFKAAFKGQVLTADDPEYEESRKIWNAMIDRRPGLVARCTGTVDVVQAVRFARHHGLLS
SVRGGGHNIAGLAVCEGGLMIDMSLLRGVWVDPVHRTARAQAGCTLADVDRETQLHGLAAVLGFVSATGIAGLTVGGGFG
YLTRRHGWTCDNVVSMEVVTAGGDVLRVSADENEDLFWALRGGSGNFGIVTSFEYRLFAVGPEILGGAIAWHGDDAKQVL
DAYREFSAGAPRELTSVAVLRIAPPAPWLPKDVHGKPIVAIFVCYSGKVEDGEALIAPLRGLGRPVADIMTRRPYTQMQS
LLDATQPKGRRYYWKSHYLPGIDRQTIDVAVEHAGRIRSPHSAILLFQIQGALGELPAGYSPAGNRDAAYVLNIAGSWEK
PGDDDINIKWARDCFEATRSCSTGGAYINFLTEDEGQDRIEAAYGRSNLDRLAALKRKYDPENFFRHTKSVSG
>Mature_472_residues
AIKLTRLDGGTVDLSPEVLQSFKAAFKGQVLTADDPEYEESRKIWNAMIDRRPGLVARCTGTVDVVQAVRFARHHGLLSS
VRGGGHNIAGLAVCEGGLMIDMSLLRGVWVDPVHRTARAQAGCTLADVDRETQLHGLAAVLGFVSATGIAGLTVGGGFGY
LTRRHGWTCDNVVSMEVVTAGGDVLRVSADENEDLFWALRGGSGNFGIVTSFEYRLFAVGPEILGGAIAWHGDDAKQVLD
AYREFSAGAPRELTSVAVLRIAPPAPWLPKDVHGKPIVAIFVCYSGKVEDGEALIAPLRGLGRPVADIMTRRPYTQMQSL
LDATQPKGRRYYWKSHYLPGIDRQTIDVAVEHAGRIRSPHSAILLFQIQGALGELPAGYSPAGNRDAAYVLNIAGSWEKP
GDDDINIKWARDCFEATRSCSTGGAYINFLTEDEGQDRIEAAYGRSNLDRLAALKRKYDPENFFRHTKSVSG

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012951
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016168
- InterPro:   IPR006094
- InterPro:   IPR006093 [H]

Pfam domain/function: PF08031 BBE; PF01565 FAD_binding_4 [H]

EC number: =1.5.3.6 [H]

Molecular weight: Translated: 51293; Mature: 51162

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIKLTRLDGGTVDLSPEVLQSFKAAFKGQVLTADDPEYEESRKIWNAMIDRRPGLVARC
CEEEEEECCCCEEECCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHCCCCEEEEE
TGTVDVVQAVRFARHHGLLSSVRGGGHNIAGLAVCEGGLMIDMSLLRGVWVDPVHRTARA
CCHHHHHHHHHHHHHHCHHHHHCCCCCCEEEEEEECCCEEEEHHHHCCCCCCHHHHHHHH
QAGCTLADVDRETQLHGLAAVLGFVSATGIAGLTVGGGFGYLTRRHGWTCDNVVSMEVVT
HCCCEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCCEEEEEEEE
AGGDVLRVSADENEDLFWALRGGSGNFGIVTSFEYRLFAVGPEILGGAIAWHGDDAKQVL
CCCCEEEEECCCCCCEEEEEECCCCCEEEEEEEEEEEEEECHHHHCCEEEECCCCHHHHH
DAYREFSAGAPRELTSVAVLRIAPPAPWLPKDVHGKPIVAIFVCYSGKVEDGEALIAPLR
HHHHHHCCCCCCHHHEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHH
GLGRPVADIMTRRPYTQMQSLLDATQPKGRRYYWKSHYLPGIDRQTIDVAVEHAGRIRSP
HCCCCHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCC
HSAILLFQIQGALGELPAGYSPAGNRDAAYVLNIAGSWEKPGDDDINIKWARDCFEATRS
CCEEEEEEECCHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEHHHHHHHHHC
CSTGGAYINFLTEDEGQDRIEAAYGRSNLDRLAALKRKYDPENFFRHTKSVSG
CCCCCEEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
AIKLTRLDGGTVDLSPEVLQSFKAAFKGQVLTADDPEYEESRKIWNAMIDRRPGLVARC
EEEEEECCCCEEECCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHCCCCEEEEE
TGTVDVVQAVRFARHHGLLSSVRGGGHNIAGLAVCEGGLMIDMSLLRGVWVDPVHRTARA
CCHHHHHHHHHHHHHHCHHHHHCCCCCCEEEEEEECCCEEEEHHHHCCCCCCHHHHHHHH
QAGCTLADVDRETQLHGLAAVLGFVSATGIAGLTVGGGFGYLTRRHGWTCDNVVSMEVVT
HCCCEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCCEEEEEEEE
AGGDVLRVSADENEDLFWALRGGSGNFGIVTSFEYRLFAVGPEILGGAIAWHGDDAKQVL
CCCCEEEEECCCCCCEEEEEECCCCCEEEEEEEEEEEEEECHHHHCCEEEECCCCHHHHH
DAYREFSAGAPRELTSVAVLRIAPPAPWLPKDVHGKPIVAIFVCYSGKVEDGEALIAPLR
HHHHHHCCCCCCHHHEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHH
GLGRPVADIMTRRPYTQMQSLLDATQPKGRRYYWKSHYLPGIDRQTIDVAVEHAGRIRSP
HCCCCHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCC
HSAILLFQIQGALGELPAGYSPAGNRDAAYVLNIAGSWEKPGDDDINIKWARDCFEATRS
CCEEEEEEECCHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEHHHHHHHHHC
CSTGGAYINFLTEDEGQDRIEAAYGRSNLDRLAALKRKYDPENFFRHTKSVSG
CCCCCEEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3622516; 2680607; 2115879 [H]