Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91789233
Identifier: 91789233
GI number: 91789233
Start: 3570142
End: 3571563
Strand: Direct
Name: 91789233
Synonym: Bpro_3377
Alternate gene names: NA
Gene position: 3570142-3571563 (Clockwise)
Preceding gene: 91789232
Following gene: 91789244
Centisome position: 68.65
GC content: 63.43
Gene sequence:
>1422_bases ATGGCTATCAAACTCACACGACTGGACGGCGGGACAGTGGACCTTTCGCCGGAGGTCCTGCAGTCGTTCAAGGCCGCATT CAAAGGCCAGGTGCTGACTGCGGATGACCCGGAATACGAGGAGTCGCGCAAGATCTGGAACGCGATGATCGATCGTCGCC CTGGCCTGGTGGCTCGTTGCACCGGGACGGTCGATGTCGTGCAGGCCGTTCGGTTCGCGCGTCATCACGGGCTTCTCAGT TCCGTGCGCGGCGGCGGTCACAATATCGCAGGGCTTGCGGTCTGCGAGGGCGGCCTCATGATCGACATGTCGCTGCTGAG AGGCGTTTGGGTCGATCCAGTGCACCGCACGGCTCGCGCGCAAGCCGGCTGCACACTGGCCGACGTCGACCGCGAGACAC AGCTGCACGGGCTCGCAGCCGTGCTCGGTTTTGTTTCTGCCACCGGGATTGCAGGCCTCACCGTCGGCGGCGGATTTGGC TACCTCACGCGTCGCCACGGCTGGACCTGCGACAACGTGGTCTCGATGGAAGTGGTGACCGCCGGCGGCGACGTCTTGCG TGTGTCTGCGGACGAGAATGAGGACCTGTTCTGGGCGCTGCGTGGCGGCAGCGGCAACTTCGGAATCGTCACATCCTTTG AGTACCGACTCTTTGCCGTCGGCCCCGAAATCCTGGGAGGCGCGATCGCATGGCACGGCGACGACGCCAAGCAAGTTCTC GACGCCTACCGTGAGTTCAGCGCCGGGGCGCCGCGCGAACTGACCAGCGTGGCTGTTCTGCGGATTGCGCCGCCGGCACC TTGGCTCCCGAAGGATGTGCACGGCAAGCCGATCGTCGCCATCTTCGTCTGCTACTCCGGCAAGGTCGAAGACGGAGAAG CATTGATCGCGCCGCTGCGCGGGCTTGGTCGGCCAGTGGCCGATATCATGACGCGTCGGCCCTATACGCAGATGCAGAGT CTGCTTGATGCCACACAGCCCAAAGGACGGCGCTACTACTGGAAGTCACACTACCTGCCAGGTATCGATCGTCAGACCAT TGACGTCGCCGTGGAGCATGCGGGCCGAATTCGATCGCCCCATTCGGCCATCCTCCTGTTCCAGATACAGGGTGCGCTGG GCGAGCTGCCTGCCGGGTACTCGCCGGCAGGCAATCGAGACGCAGCCTATGTGCTGAACATCGCTGGCTCCTGGGAGAAG CCGGGCGATGACGACATCAATATCAAGTGGGCGCGGGACTGCTTCGAAGCGACGCGCTCCTGCTCGACAGGCGGGGCATA CATCAACTTCCTTACTGAGGACGAGGGCCAGGACCGCATCGAGGCCGCGTACGGCCGATCCAACCTGGACAGACTCGCGG CGCTCAAGCGCAAGTACGACCCCGAAAACTTCTTCCGCCACACAAAGAGTGTCTCTGGTTGA
Upstream 100 bases:
>100_bases GGACCAACCGACCCGTTCCGTCGCTCGAACACTTGCCAGGATGGCGGCCGGCAACCGGCAGTAAGACCCAAAATTTCATC ACTCTTCCTGGAGATGACTC
Downstream 100 bases:
>100_bases ACTGACCGACTTGATCGACGTTCTGCTTGTGTTGCGCGCGGCACACGACAGCGATGCCGCGTTTGAATGTGACGTGCCCG GAGCGTGAAGTGCGGAGTGT
Product: FAD linked oxidase-like protein
Products: NA
Alternate protein names: 6-HDNO [H]
Number of amino acids: Translated: 473; Mature: 472
Protein sequence:
>473_residues MAIKLTRLDGGTVDLSPEVLQSFKAAFKGQVLTADDPEYEESRKIWNAMIDRRPGLVARCTGTVDVVQAVRFARHHGLLS SVRGGGHNIAGLAVCEGGLMIDMSLLRGVWVDPVHRTARAQAGCTLADVDRETQLHGLAAVLGFVSATGIAGLTVGGGFG YLTRRHGWTCDNVVSMEVVTAGGDVLRVSADENEDLFWALRGGSGNFGIVTSFEYRLFAVGPEILGGAIAWHGDDAKQVL DAYREFSAGAPRELTSVAVLRIAPPAPWLPKDVHGKPIVAIFVCYSGKVEDGEALIAPLRGLGRPVADIMTRRPYTQMQS LLDATQPKGRRYYWKSHYLPGIDRQTIDVAVEHAGRIRSPHSAILLFQIQGALGELPAGYSPAGNRDAAYVLNIAGSWEK PGDDDINIKWARDCFEATRSCSTGGAYINFLTEDEGQDRIEAAYGRSNLDRLAALKRKYDPENFFRHTKSVSG
Sequences:
>Translated_473_residues MAIKLTRLDGGTVDLSPEVLQSFKAAFKGQVLTADDPEYEESRKIWNAMIDRRPGLVARCTGTVDVVQAVRFARHHGLLS SVRGGGHNIAGLAVCEGGLMIDMSLLRGVWVDPVHRTARAQAGCTLADVDRETQLHGLAAVLGFVSATGIAGLTVGGGFG YLTRRHGWTCDNVVSMEVVTAGGDVLRVSADENEDLFWALRGGSGNFGIVTSFEYRLFAVGPEILGGAIAWHGDDAKQVL DAYREFSAGAPRELTSVAVLRIAPPAPWLPKDVHGKPIVAIFVCYSGKVEDGEALIAPLRGLGRPVADIMTRRPYTQMQS LLDATQPKGRRYYWKSHYLPGIDRQTIDVAVEHAGRIRSPHSAILLFQIQGALGELPAGYSPAGNRDAAYVLNIAGSWEK PGDDDINIKWARDCFEATRSCSTGGAYINFLTEDEGQDRIEAAYGRSNLDRLAALKRKYDPENFFRHTKSVSG >Mature_472_residues AIKLTRLDGGTVDLSPEVLQSFKAAFKGQVLTADDPEYEESRKIWNAMIDRRPGLVARCTGTVDVVQAVRFARHHGLLSS VRGGGHNIAGLAVCEGGLMIDMSLLRGVWVDPVHRTARAQAGCTLADVDRETQLHGLAAVLGFVSATGIAGLTVGGGFGY LTRRHGWTCDNVVSMEVVTAGGDVLRVSADENEDLFWALRGGSGNFGIVTSFEYRLFAVGPEILGGAIAWHGDDAKQVLD AYREFSAGAPRELTSVAVLRIAPPAPWLPKDVHGKPIVAIFVCYSGKVEDGEALIAPLRGLGRPVADIMTRRPYTQMQSL LDATQPKGRRYYWKSHYLPGIDRQTIDVAVEHAGRIRSPHSAILLFQIQGALGELPAGYSPAGNRDAAYVLNIAGSWEKP GDDDINIKWARDCFEATRSCSTGGAYINFLTEDEGQDRIEAAYGRSNLDRLAALKRKYDPENFFRHTKSVSG
Specific function: Unknown
COG id: COG0277
COG function: function code C; FAD/FMN-containing dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012951 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR016168 - InterPro: IPR006094 - InterPro: IPR006093 [H]
Pfam domain/function: PF08031 BBE; PF01565 FAD_binding_4 [H]
EC number: =1.5.3.6 [H]
Molecular weight: Translated: 51293; Mature: 51162
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIKLTRLDGGTVDLSPEVLQSFKAAFKGQVLTADDPEYEESRKIWNAMIDRRPGLVARC CEEEEEECCCCEEECCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHCCCCEEEEE TGTVDVVQAVRFARHHGLLSSVRGGGHNIAGLAVCEGGLMIDMSLLRGVWVDPVHRTARA CCHHHHHHHHHHHHHHCHHHHHCCCCCCEEEEEEECCCEEEEHHHHCCCCCCHHHHHHHH QAGCTLADVDRETQLHGLAAVLGFVSATGIAGLTVGGGFGYLTRRHGWTCDNVVSMEVVT HCCCEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCCEEEEEEEE AGGDVLRVSADENEDLFWALRGGSGNFGIVTSFEYRLFAVGPEILGGAIAWHGDDAKQVL CCCCEEEEECCCCCCEEEEEECCCCCEEEEEEEEEEEEEECHHHHCCEEEECCCCHHHHH DAYREFSAGAPRELTSVAVLRIAPPAPWLPKDVHGKPIVAIFVCYSGKVEDGEALIAPLR HHHHHHCCCCCCHHHEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHH GLGRPVADIMTRRPYTQMQSLLDATQPKGRRYYWKSHYLPGIDRQTIDVAVEHAGRIRSP HCCCCHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCC HSAILLFQIQGALGELPAGYSPAGNRDAAYVLNIAGSWEKPGDDDINIKWARDCFEATRS CCEEEEEEECCHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEHHHHHHHHHC CSTGGAYINFLTEDEGQDRIEAAYGRSNLDRLAALKRKYDPENFFRHTKSVSG CCCCCEEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCC >Mature Secondary Structure AIKLTRLDGGTVDLSPEVLQSFKAAFKGQVLTADDPEYEESRKIWNAMIDRRPGLVARC EEEEEECCCCEEECCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHCCCCEEEEE TGTVDVVQAVRFARHHGLLSSVRGGGHNIAGLAVCEGGLMIDMSLLRGVWVDPVHRTARA CCHHHHHHHHHHHHHHCHHHHHCCCCCCEEEEEEECCCEEEEHHHHCCCCCCHHHHHHHH QAGCTLADVDRETQLHGLAAVLGFVSATGIAGLTVGGGFGYLTRRHGWTCDNVVSMEVVT HCCCEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCCEEEEEEEE AGGDVLRVSADENEDLFWALRGGSGNFGIVTSFEYRLFAVGPEILGGAIAWHGDDAKQVL CCCCEEEEECCCCCCEEEEEECCCCCEEEEEEEEEEEEEECHHHHCCEEEECCCCHHHHH DAYREFSAGAPRELTSVAVLRIAPPAPWLPKDVHGKPIVAIFVCYSGKVEDGEALIAPLR HHHHHHCCCCCCHHHEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHH GLGRPVADIMTRRPYTQMQSLLDATQPKGRRYYWKSHYLPGIDRQTIDVAVEHAGRIRSP HCCCCHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCC HSAILLFQIQGALGELPAGYSPAGNRDAAYVLNIAGSWEKPGDDDINIKWARDCFEATRS CCEEEEEEECCHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEHHHHHHHHHC CSTGGAYINFLTEDEGQDRIEAAYGRSNLDRLAALKRKYDPENFFRHTKSVSG CCCCCEEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3622516; 2680607; 2115879 [H]