Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is llaDCHIA [H]
Identifier: 91789207
GI number: 91789207
Start: 3547989
End: 3548813
Strand: Direct
Name: llaDCHIA [H]
Synonym: Bpro_3351
Alternate gene names: 91789207
Gene position: 3547989-3548813 (Clockwise)
Preceding gene: 91789206
Following gene: 91789208
Centisome position: 68.23
GC content: 47.15
Gene sequence:
>825_bases TTGCCTACAAATGAACTTTTCCCTGTAACGAATCATGCACAACCCGTTTTACGCTGGGCCGGCAGCAAGCGTCGCATCAC CCCCATTCTTTCAGCTTATGCCCCCCCGAAATACGAACGCTACTTCGAACCTTTTGTAGGCTCGGGAGCACTCTTCTTCT GCTTAAGGCCGCCGCTAGCTTTCATTGGAGACGTTAACCCGGAAGTCACGTCAACGTATCAGGCTCTAAAAGATGCCCCC TCGCAGGTAGCCCAACACCTTACAGAAATTCCTAAAACGAAAGACGCTTACCTACTGCTGCGTCAACTCCGTCCGGCTGA TCTGACAACAGCGCAGCGAGCAGCGAGACTAATTTTCCTAATGAAAAGTTGCTTTAATGGCGTATACCGCACAAATGCGT CCGGACAATTCAATGTGCCATTCGGGTCCACTATCTACAAACTACCAACGTCAGAAGAACTTCAAAGTGTTTCCGACGCT TTGAAATTAACGCAGGTTAGAACGGGCGACTATAAAAGTTGGCTTGATATCGCAGGCGTGGGAGATTTCATATATTTGGA TCCACCTTATAGTTGCAGCTCAAGATATAGGGGAGAGTATGGCTATGACGCTATCTTCGGAGACGTGCAACTAGAAGAGT TGTTAACCTGTTGCAAAGCACTTCAGAATCGGGGGGCAAAAGTCATGCTTTCGTACAAGAATAACAAACAAGTCGTGAAT GCACTAAAGGATTGGCGCATTTTGAATCTCGCTGTACCTAGAAGCGTTAATGCGAATAGTATGGGCCGAACACCAGCCGC CGAAATACTAGCAATGAATTACTAA
Upstream 100 bases:
>100_bases GTCACAGACATTGTTGACCACAAGCCGGGGAAAACCGTGTTCAATCGGGTGACGGGGATGAAAGATAGCTGGGGAAAGTA GCGTGATTGTCGATACGCAG
Downstream 100 bases:
>100_bases AACACTGACGGGAGATGAGATGAAGTTACGTATTGCCGTGCTAAGCGACTTGCATGCCACCGGCCATGCCGAAAATAATC CATCATCCTCTTACATGCGT
Product: DNA adenine methylase
Products: NA
Alternate protein names: M.LlaDCHI A; M.LlaDCHIA; Adenine-specific methyltransferase LlaDCHIA; M.LlaII A [H]
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MPTNELFPVTNHAQPVLRWAGSKRRITPILSAYAPPKYERYFEPFVGSGALFFCLRPPLAFIGDVNPEVTSTYQALKDAP SQVAQHLTEIPKTKDAYLLLRQLRPADLTTAQRAARLIFLMKSCFNGVYRTNASGQFNVPFGSTIYKLPTSEELQSVSDA LKLTQVRTGDYKSWLDIAGVGDFIYLDPPYSCSSRYRGEYGYDAIFGDVQLEELLTCCKALQNRGAKVMLSYKNNKQVVN ALKDWRILNLAVPRSVNANSMGRTPAAEILAMNY
Sequences:
>Translated_274_residues MPTNELFPVTNHAQPVLRWAGSKRRITPILSAYAPPKYERYFEPFVGSGALFFCLRPPLAFIGDVNPEVTSTYQALKDAP SQVAQHLTEIPKTKDAYLLLRQLRPADLTTAQRAARLIFLMKSCFNGVYRTNASGQFNVPFGSTIYKLPTSEELQSVSDA LKLTQVRTGDYKSWLDIAGVGDFIYLDPPYSCSSRYRGEYGYDAIFGDVQLEELLTCCKALQNRGAKVMLSYKNNKQVVN ALKDWRILNLAVPRSVNANSMGRTPAAEILAMNY >Mature_273_residues PTNELFPVTNHAQPVLRWAGSKRRITPILSAYAPPKYERYFEPFVGSGALFFCLRPPLAFIGDVNPEVTSTYQALKDAPS QVAQHLTEIPKTKDAYLLLRQLRPADLTTAQRAARLIFLMKSCFNGVYRTNASGQFNVPFGSTIYKLPTSEELQSVSDAL KLTQVRTGDYKSWLDIAGVGDFIYLDPPYSCSSRYRGEYGYDAIFGDVQLEELLTCCKALQNRGAKVMLSYKNNKQVVNA LKDWRILNLAVPRSVNANSMGRTPAAEILAMNY
Specific function: This methylase recognizes the double-stranded sequence GATC, causes specific methylation on A-2 on both strands, and protects the DNA from cleavage by the LlaDCHI endonuclease [H]
COG id: COG0338
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1789789, Length=263, Percent_Identity=26.2357414448669, Blast_Score=77, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023095 - InterPro: IPR002052 - InterPro: IPR012327 [H]
Pfam domain/function: PF02086 MethyltransfD12 [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 30682; Mature: 30550
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTNELFPVTNHAQPVLRWAGSKRRITPILSAYAPPKYERYFEPFVGSGALFFCLRPPLA CCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCHH FIGDVNPEVTSTYQALKDAPSQVAQHLTEIPKTKDAYLLLRQLRPADLTTAQRAARLIFL HHCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH MKSCFNGVYRTNASGQFNVPFGSTIYKLPTSEELQSVSDALKLTQVRTGDYKSWLDIAGV HHHHHHHHEECCCCCEEECCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCC GDFIYLDPPYSCSSRYRGEYGYDAIFGDVQLEELLTCCKALQNRGAKVMLSYKNNKQVVN CCEEEECCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHH ALKDWRILNLAVPRSVNANSMGRTPAAEILAMNY HHHCCEEEEEECCCCCCCCCCCCCCHHHHEEECC >Mature Secondary Structure PTNELFPVTNHAQPVLRWAGSKRRITPILSAYAPPKYERYFEPFVGSGALFFCLRPPLA CCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCHH FIGDVNPEVTSTYQALKDAPSQVAQHLTEIPKTKDAYLLLRQLRPADLTTAQRAARLIFL HHCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH MKSCFNGVYRTNASGQFNVPFGSTIYKLPTSEELQSVSDALKLTQVRTGDYKSWLDIAGV HHHHHHHHEECCCCCEEECCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCC GDFIYLDPPYSCSSRYRGEYGYDAIFGDVQLEELLTCCKALQNRGAKVMLSYKNNKQVVN CCEEEECCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHH ALKDWRILNLAVPRSVNANSMGRTPAAEILAMNY HHHCCEEEEEECCCCCCCCCCCCCCHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7793939; 11467810 [H]